Basic Information

Insect: Brachypterus glaber
Gene Symbol: -
Assembly: GCA_958510825.1
Location: OY294045.1:96203976-96213062[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7.4e-07 0.00043 20.9 0.0 1 43 8 50 8 52 0.92

2 3 1.7e-07 0.0001 22.9 0.0 4 39 68 103 65 107 0.91

3 3 7e-07 0.00041 20.9 0.0 4 39 128 163 125 166 0.92

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7.4e-07	0.00043	20.9	1	43	8	50	8	52	0.92
2	3	1.7e-07	0.0001	22.9	4	39	68	103	65	107	0.91
3	3	7e-07	0.00041	20.9	4	39	128	163	125	166	0.92

Sequence Information

Coding Sequence: aTGGAGCCTGAAGAAAAATATACTGAAGAGGATGTTAAAGATGCATGCGAGTCAATTAGGAAGCAGGATATGTCGATTCAGGATGCTTGTATAATATTTGGACTTCCCAGGACTATAATACAGGACCGGCTCAAAGGCAAAAATTCCAGTGGATtagttacaGCGGCTCGTACTTCTCATTCGTATGCATACTCCAGAAAACAATTAGAAGATGCCATACAAGGAGTTATGGAGTTTAATATGTCGATTCGTGAGTCATGCCTAAAATTCGGAGTTCCCAGATCAACTTTAAGAGGACATTTAAAACGGGCACAACTTGGACAGCAACCCACCTTTACTCAAGgtAAAGTGACAAAAGCGGAAAAGAAATACACCTCACAGACAATGGTGGCTGCcctaaaagatataaaagaaaaaaacatatcaATTCGAGAAACGTGTAGAAAGTATGGATTACCCAGAGCTACTGTCCAGGGTCGTCTTCGCAGGGAAATATTAAACCCAAAATCAATTCTAACTCCAAATGAAGAAACAGATTTAGTTAAATGGCTCATCGACATAATGTCGACTGGATTTCCCCTTAAAAAAGAGAATTTACTCAACAGTGTACAGGAAATCATTATTGAAACTGAAAGACAAACGCCTTTCAAAGATGGCAGACCGGGTCCAACATGGTATAAAAACTTCAAAAGAAGACATTTAGAAATATCTCTTATTGAAAAAGAAACTCAAAGCAAAGCGAAACAACGATTAACGGAAGAACAAATCAGAAAGTGGTTTGAAAAATTAGAATCCTATCTGCATGAAAATTATTGTAAGGATATTTTAACAGATCCTAAAAGAATATTAGTTATTGATGAAATTAAGTTTTTCTCTGATGAAAAAGATATCTACCCTGGAACAGTTAACGACcaagaattaagaaaatatattaccGTTTTAACAATGTTTAATGCGTATGGAAATATACTAGATCCTATGGTGGTGTTTCCCTATATTGATCCACCAGATAAAATAGCAGATAGTGTACCTTCTGGTTGGTTTTTAGGTAAGTCAGAATCTGGGTTAAGCAATGGAGAAATTTACTATGATTATCTAGTAAATGCTGTACACACTTGGATGATACAAAACAGTATTCCTACGCCTGTGTTGGTGTTAATCGACGGCAACAAGGCTCAGTTAACTTTTGATTTATGTGAGTTTTGTATAAAAGAAGAAATTATACTCTACGCCTTACCATCTGAAGAAATCTTGCAACCTTCGGAAACTAGTATATTTAAACCATTTAAAAGTGAATGGGATAAAACATTGACCAACTGGAAAAGTGAATCTGGCACTTTAACTGAATCAGATTTTTGTTCTTTTATCAAGAACATTATAGGAGATAATGAATTGTGTGAAAGTATAAAAGAAAGTTTTCGGATATGTGGTCTGTATCCCTTTAATTCTGATATAATTGACTATTCAAAATGTCCAACTAAATTAGAAACATTACCTATGGAATCCGAAAGTATTACTACAGAAGTTGCTTTTAAAGAGGGCATGTATGACGAGTTTGAGTCCGATTGTGAAATGCCTCAAGAGAAAGTTTCTTGTCcagatatttctaaaaatgattTTACGACTGCTCAATCGGTATTAATCAAATTACAACCCACATTGGAACAAAAGGGTATTAATGTAGCCCAAATTCTGGCTGAAATGAAACTTCTTAAAATTGAATTATCCTATGGTGGTATTTATATTGATCCACCAGATAAAATAGCAGATAGTGTACCTTCTGGTTGGTTTTTAGGTAAGTCAGAATCTGGGTTAAGCAATGGGGAAATTTACTATGATTATCTAGTGAATGCTGTGCACACTTGGATGATACAAAACAGTATTCCTACGCCTGTGTTGGTGTTAATCGACGGCAGAAAAGCTCAGTTAACTTTTGATTTATGTGAGTTttgcataaaagaagaaattATACTCTACGCCTTACCATCTGAAGAAATCTTGCAACCTTCGGAAACTAGTATATTTAAACCATTTAAAAGTGAATGGGATAAAACATTGACCAACTGGAAAAGTGAATCTGGCACTTTAACTGAATCAGATTTTTGTTCTTTTATCAAGAACATTATAGGAGATAATGAATTGTGTGAAAGTATAAAAGAAAGTTTTCGGATATGTGGTCTGTATCCCTTTAATTCTGATATAATTGACTATTCAAAATGTCCAACTAAATTAGACACATTACCTATGGAATCTGAAAGTATTACTACAGAAGTTGCTTTTAAAGAGGGCATGTATGACGAGTTTGAGTCCGATTGCGAAATGCCTCAAGAGAAAGTTTCTTGTCcagatatttctaaaaatgattTTACGACTGCTCAATCGGTATTAATCAAATTACAACCCACATTGGAACAAAAGGAAACTCAAAGCCAAGCGAAACAACGATTAACGGAAGAACAAATCAGAAAGTGGTTTGAAAAAGTAGAATCCTATCTGCATGAAAATTATTGTAAGGATATTTTAACAGATCCTAAAAGAATATTAGTTATTGATGAAATTAGGTTTTTCTCTGACGAAAAAGATATCTACCCTGGAACAGTTAACGACcaagaattaagaaaatatattaccATTTTAACAATGTTTAATGCGTATGGAAATATACTAGATCCTATGGTGGTGTTTCCCTATATTGATCCACCAGATAAAATAGCAGATAGTGTACCTTCTGGTTGGTTTTTAGGTAAGTCAGAATCTGGGTTAAGCAATGGAGAAATTTACTATGATTATCTAGTGAATGCTGTACACACTTGGATGATCCAAAACAGTATTCCTACGCCTGTGTTGGTGTTAATCGACGGCAACAAGGCTCAGTTAACTTTTGATTTATGTGAGTTttgcataaaagaagaaattATACTCTACGCCTTACCATCTGAAGAAATCTTGCAACCTTCGGAAACTAGTATATTTAAACCATTTAAAAGTGAATGGGATAAAACATTGACCAACTGGAAAAGTGAATCTGGCACTTTAACTGAATCAGATTTTTGTTCTTTTATCAAGAATATTATAGGAGATAACGAATTGTGTGAAAGTATAAAAGAAAGTTTTCGGATATGTGGTCTGTTTCCCTTTAATTCTGATATAATTGACTATTCAAAATGTCCAACTAAATTAGAAACATTACCTATGGAATCCGAAAGTATTACTACAGAAGTTGCTTTTAAAGAGGGCATGTATGACGAGTTTGAGTCCGATTGCGAAATGCCCCAAGAGAAAGTTTCTTGTCCAGATATTTCCAAAAATGATTTTACGACTGCTCAATCGGTATTAATCAAATTACAACCCACATTGAAACAAAAGGGTATTAATGTAGCCCAAATTCTGGCTGAAATGAAACTTCTTAAAATTGAGTTGTATTCACCAGATGAACTTCTTGATGATGAGAGCTCTAGGATATGA
Protein Sequence: MEPEEKYTEEDVKDACESIRKQDMSIQDACIIFGLPRTIIQDRLKGKNSSGLVTAARTSHSYAYSRKQLEDAIQGVMEFNMSIRESCLKFGVPRSTLRGHLKRAQLGQQPTFTQGKVTKAEKKYTSQTMVAALKDIKEKNISIRETCRKYGLPRATVQGRLRREILNPKSILTPNEETDLVKWLIDIMSTGFPLKKENLLNSVQEIIIETERQTPFKDGRPGPTWYKNFKRRHLEISLIEKETQSKAKQRLTEEQIRKWFEKLESYLHENYCKDILTDPKRILVIDEIKFFSDEKDIYPGTVNDQELRKYITVLTMFNAYGNILDPMVVFPYIDPPDKIADSVPSGWFLGKSESGLSNGEIYYDYLVNAVHTWMIQNSIPTPVLVLIDGNKAQLTFDLCEFCIKEEIILYALPSEEILQPSETSIFKPFKSEWDKTLTNWKSESGTLTESDFCSFIKNIIGDNELCESIKESFRICGLYPFNSDIIDYSKCPTKLETLPMESESITTEVAFKEGMYDEFESDCEMPQEKVSCPDISKNDFTTAQSVLIKLQPTLEQKGINVAQILAEMKLLKIELSYGGIYIDPPDKIADSVPSGWFLGKSESGLSNGEIYYDYLVNAVHTWMIQNSIPTPVLVLIDGRKAQLTFDLCEFCIKEEIILYALPSEEILQPSETSIFKPFKSEWDKTLTNWKSESGTLTESDFCSFIKNIIGDNELCESIKESFRICGLYPFNSDIIDYSKCPTKLDTLPMESESITTEVAFKEGMYDEFESDCEMPQEKVSCPDISKNDFTTAQSVLIKLQPTLEQKETQSQAKQRLTEEQIRKWFEKVESYLHENYCKDILTDPKRILVIDEIRFFSDEKDIYPGTVNDQELRKYITILTMFNAYGNILDPMVVFPYIDPPDKIADSVPSGWFLGKSESGLSNGEIYYDYLVNAVHTWMIQNSIPTPVLVLIDGNKAQLTFDLCEFCIKEEIILYALPSEEILQPSETSIFKPFKSEWDKTLTNWKSESGTLTESDFCSFIKNIIGDNELCESIKESFRICGLFPFNSDIIDYSKCPTKLETLPMESESITTEVAFKEGMYDEFESDCEMPQEKVSCPDISKNDFTTAQSVLIKLQPTLKQKGINVAQILAEMKLLKIELYSPDELLDDESSRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -