Bgla017654.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- -
- Assembly
- GCA_958510825.1
- Location
- OY294048.1:13275838-13282061[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 9.4e+02 0.6 0.0 1 16 16 31 16 32 0.92 2 3 6.1e-13 3.6e-10 40.3 0.0 4 38 113 146 110 153 0.89 3 3 7.4e-13 4.3e-10 40.1 0.0 4 42 296 333 293 335 0.92
Sequence Information
- Coding Sequence
- ATGCCTATAACATCCAAAGAAAAAGACCTAAATCTGGGAAACTGGACAGAAGAAAGCCTTAAAACTGCCATGGAAGTGATACAAAATGGAGCAATCAAAACTGAAAATGACGAAgaagagaaaaaatatataaaaaccgGGTTGATTACTCTAGACAAAAATATGGCcatgaaaaatgaaaattatgaaACAGACATTAGTATGCTACACGAAAGTGTTGAAATTAAAGAAGAAAATGGGACAGATGAAGAAAAACATACAGACCAAAATGGAGAActATCATCATTGAAAAGGAAAAGACAACCCTCCCTACTTCGAGGAAAATGGACACAAAAAGACCTCGATGACGCGTTGCAGGCCGTCAGTGAGGGAATGACCGTAAAAAAAGCGGCAAACTTATTCGGTATACCCCGGACTTCCTTACAAAATCGCGTCAGCTCTGCAAAAGTGAAAAAGACAAACACCCGTTTCTACCAATGCGTTTTGGGCGAGGAAAACGAGAAAATCCTAGCCGATCGAATCAAAGAATTACAGAAAAACGGAGTCAAATTTAACTTGACCGAGATCCGGCGAATTGCGTATGCGTTTGCAGTAGAACGCAATATCAAACACCAGTTTAATCAAAAGGACAAAATGGCGGGCATCGATTGGGTGAGAAATTTCAGGAGCAGAAATCCTGATATTATTAACCAGGATGAAAAAGTaactgaagaagaagaagaagcgaATAACAGGGAGGATAATGAATTGAGTAAAGATGAAGATTCTGATGAAGATTCGGATGAAATGGGCGATACAGACGAAGATCAAAAGCCAGAAGATCAAAGTGGAGATCCAAATAAaaagtccaaacgaaaaagaaCGAGACATAGATGGACACAACAAAATCTCAACGATGCCATAGAATCAATCAAAAATGGAATGACCCTTAACCAAGCGTCCAGACGTTATGGCATTCCCCGAACCTCTTTGGACAGACGCATGCGAACCGGAAACTTTATAAAAGGCAAACTGGGTCCCTCGATTTTAGGTGAAGAAAACGAAATGAAGCTAGCGAATCATATAAGAGTAATGCAGAGAAACGGCTACGAAGTTTCGAAGAACGAAATCCGGAAAATAGCATTTTCTTTTGCCGAACAATTTAAACTGCCACATGATTTTGACAAGGTGAAGCGAAAAGCAGGCTCCGAATGGTTTAAAgcgtttaaatgtaaaaatcctGATATTAGAATTAAGAAGAGAAATGAAGATGACGAGGAAGAAATAGAAGAGGAACCGAAGGACAaagaaagtaatttttag
- Protein Sequence
- MPITSKEKDLNLGNWTEESLKTAMEVIQNGAIKTENDEEEKKYIKTGLITLDKNMAMKNENYETDISMLHESVEIKEENGTDEEKHTDQNGELSSLKRKRQPSLLRGKWTQKDLDDALQAVSEGMTVKKAANLFGIPRTSLQNRVSSAKVKKTNTRFYQCVLGEENEKILADRIKELQKNGVKFNLTEIRRIAYAFAVERNIKHQFNQKDKMAGIDWVRNFRSRNPDIINQDEKVTEEEEEANNREDNELSKDEDSDEDSDEMGDTDEDQKPEDQSGDPNKKSKRKRTRHRWTQQNLNDAIESIKNGMTLNQASRRYGIPRTSLDRRMRTGNFIKGKLGPSILGEENEMKLANHIRVMQRNGYEVSKNEIRKIAFSFAEQFKLPHDFDKVKRKAGSEWFKAFKCKNPDIRIKKRNEDDEEEIEEEPKDKESNF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -