Bgla009821.1
Basic Information
- Insect
- Brachypterus glaber
- Gene Symbol
- bab1
- Assembly
- GCA_958510825.1
- Location
- OY294045.1:46046815-46087899[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.5e-11 4.4e-08 33.6 0.0 4 38 376 411 373 416 0.89 2 4 5.2e-13 3e-10 40.6 0.1 1 39 427 465 427 468 0.95 3 4 2.3e-17 1.3e-14 54.5 0.0 2 45 483 527 482 527 0.96 4 4 5.5e-16 3.2e-13 50.1 0.1 1 39 534 573 534 576 0.95
Sequence Information
- Coding Sequence
- atgagCGGGCAGCAATATTGCCTGCGATGGAACAATTACCAAAGTAATATGACAGCTGTTTTCCACGATTTATTGAAAAATGAAGCCTTTGTCGATGTAACCTTAGCTTGTAACGATTTGTCATTGCGAGCACATAAAGTGGTTTTATCGGCATGTtcatcatattttcaaaaactgttGATGGAAAACCCATGTCAACATCCCACCATCATCATGCCTCCAGACGTCTGTTTTGATGACCTAAAGTTCATCATAGATTTTGTCTACCAAGGGGAGATTGATATTTCACAATCTGAAATACAGTCTCTACTAAAAACTGCAGACCAATTAAAGATTAAAGGCCTATGTGATTCAACGGAGAGCACCCTGAACAAAGAATCATCATCTAATCCCGAATGCTCGAAATCCAGTCGGAAATCAATACCAAAACAATTGAAGCTGTGtgataataaaagaaaatttaaaatcacgCGTAAACGGAATAATCAGGAAGAAGAGGAAAATAAAACCCCGGGAGTCGACGATAAGGAGAATATTGAGTGTGATACGCCAACAGAAGAAGAAAATGACATGCCAGTAGCTCTTGATAAAGCCAAAAAGAATAGGCTAGAGCCTGAACAGTCGAAAGCACTTAACATGAGTAGTAACGGAATACTAACTAGTCATacaatttttacacattttggCGTAGACAATGACGATTTTCCACCCGAGCCCCCTGCCCCATCGGCGATTCCCGTGGGACATATGGATATTAGCGATCATTCCCCAACGAGGACTCTCTTGACAAATTCCCATAGAACAGATCTGTCCGATTCTACAAAATATACTTTAGAAATTAAGAAAGAAGCAGAAGTCAAGTTTGAAACGTTGAGAAGTTATGAAACGGACTCGTTTCTAGAAATGGAATCGCGGATATCCGGTCAAGATTTATCCATGGATAGTCACGATGATGGTGAGAGAGATTATAGTGGCATGTTAATAGCCCCGGATTTCGGAAGGATGGAGGCTAATCCTTGCGGTTCGTTATTAGATGATGAAATCCACATAAAAACTGAACTTCTCGATGTGGGGTCCCAAGGTCAAAGAGCTTCAACCGGCGGTCCAAAAACATGGACccaaaaagacatggacttggCGTTGGACGCTCTAAGAAATCACAACATGAGCCTGACGAAGGCCTCCGCTACGTATGGAATTCCCTCCACCACCTTATGGCAGCGAGCACACAGAATGGGCATCGACACACCGAAGAAGGAGGGCCCCACGAAATCCTGGACggaagaaaatttaaacagtGCTTTGGAAGCGCTGAGAACGGGCAGCATTTCTGCAAATAAGGCCAGCAAAGCATAcgGAATACCCAGCAGCACGTTGTACAAAATCGCCCGAAGGGAAGGCATACGATTAGCAGCCCCCTTTAATGCGGCGCCAACCACTTGGACCTCAGAGgatttagaaaaagctttagAATCAATAAGGACTGGTCAGACGTCCGTACAAAAGGCTTCCACGGAATTTGGTATACCCACCGGCACACTTTACGGTCGATGCAAAAGAGAGGGAATTGAACTGTCGAGGTCTAATCCTACCCCGTGGTCAGAGGATGCTATGGGGGAGGCTTTAGAAGCAGTTagattaggaCACATGTCCATTAACCAGGCAGCAATCCATTATAACTTACCATACTCTTCCTTATATGGCAGATTTAAAAGAGGAGCGAAATATGATTCCGACAACATTGAAATTAGCCAAGACAGTCAGTCACAACTCGATCCTCAAATTTTCGGTATGGAATACGCTCAGGAACTCCAGCCTCAAATACAGTATCAGAATCACACTAACAGCTGA
- Protein Sequence
- MSGQQYCLRWNNYQSNMTAVFHDLLKNEAFVDVTLACNDLSLRAHKVVLSACSSYFQKLLMENPCQHPTIIMPPDVCFDDLKFIIDFVYQGEIDISQSEIQSLLKTADQLKIKGLCDSTESTLNKESSSNPECSKSSRKSIPKQLKLCDNKRKFKITRKRNNQEEEENKTPGVDDKENIECDTPTEEENDMPVALDKAKKNRLEPEQSKALNMSSNGILTSHTIFTHFGVDNDDFPPEPPAPSAIPVGHMDISDHSPTRTLLTNSHRTDLSDSTKYTLEIKKEAEVKFETLRSYETDSFLEMESRISGQDLSMDSHDDGERDYSGMLIAPDFGRMEANPCGSLLDDEIHIKTELLDVGSQGQRASTGGPKTWTQKDMDLALDALRNHNMSLTKASATYGIPSTTLWQRAHRMGIDTPKKEGPTKSWTEENLNSALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTSEDLEKALESIRTGQTSVQKASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGAKYDSDNIEISQDSQSQLDPQIFGMEYAQELQPQIQYQNHTNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00244389;
- 90% Identity
- iTF_00244389;
- 80% Identity
- iTF_00244389;