Basic Information

Gene Symbol
Kdm5
Assembly
GCA_958510825.1
Location
OY294054.1:19135407-19147253[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-23 4.7e-20 72.7 0.0 2 89 119 202 118 202 0.95
2 2 1.5 6e+03 -1.3 0.0 31 77 1241 1286 1228 1295 0.70

Sequence Information

Coding Sequence
ATGACTACAAAGGTGGAAAAACTTATTACAAATGGTATAAAGTGCCATTCAGTGGGTAGTTCTACTTCTAAAACTTCTTCTCCTGTAAAGTCCAGTAACAATTCCTCATTCTCCAAGGAAGAAGCTGCTGAGTTTGAGATCCCTCCAGAAGCCCCAGTATTTTACCCCACTGAAGAAGAATTTTTGGACCCATTAGCatatattagtaaaatccgTCACATTGCCGAAAATACCGGAATATGCAAAATAAAACCCCCAGCAaACTGGCAGCCTCCATTCGCCGTGGATGTAGACAAACTAAGGTTTACTCCTCGAATTCAGAGGTTAAATGAATTAGagGCAAAAACACGCGTCAAACTCAACTTTCTTGATCAAATCGCGAAATTTTGGGAGCTACAAGGATCTTCCTTGAAAATACCAATGGTTGAAAAACGAGCGTTAGATTTATATACGTTGCATAATATTGTACAACTTGAAgGTGGCTTTGAGTATGCAACAAAAGATAGAAAATGGTCGAAAATAGCAATTCGTTTGGGTTATCCTGCCGGGAAAAGCATCGGAACTATATTAAAAACTCATTATGAGCGTTTACTATTTCCGTTCGACGTCTTTAAGCAAGGAAAATCagtaaataatattAAACTCGAGGAAAATAAGGATGAGATGGAAAAGTTTGACAGAGATTATAAACCGCACGGTATTGTCGGCCGAATGGCCATAAAGCCACCGACCGAAAAAATGGCCAGACGTTCAAAACGTTTCGAAGTGCCAGAATGCAAGACTGATaaattagaTTTTAAGATAGAAAACAAAGATGACCTTGATGATTTACACAATAAAGAGTTAAGACGTTTACAATTTTACGGCGCCGGTCCAAAAATGGCCGGTTTTCCAGATAAAACCGAAAACAAAAGAgggaaaaaatctaaaatggaGTTTGATCCACTTGCTAAATATGTATGTCACAATTGTAACCGAGGAGATTCGGAAGAGTATATGTTACTCTGTGATGGCTGTGATGACAGTTATCACACATTCTGTTTGTTGCCACCGCTACAAGAAATACCAAAAGGCGACTGGAGATGTCCAAAATGCGTAGCTGAAGAAGTCTCGAAGCCGATGGAGGCATTCGGATTCGAACAAGCCCAAAGAGAGTACACATTGCAGCAGTTTGGCGAAATGGCTGATCAATTTAAGTCTGAATACTTCAATATGCCAGTACATATGGTGGATGCCACAACAGTCGAGCGCGAGTTTTGGCGAATAGTATCCTCCATTGACGAAGATGTAACAGTCGAATACGGTGCAGATTTGCACACGATGGACCATGGTTCCGGATTTCCTACAAACACTTCCATGAACCTATTTCACGGAGACAAAGAGTACGCAGACTCTAGCTGGAACCTGAACAATCTTCCTGTTTTAGAAGGGTCTGTTCTGGGTTATATAAATGCGGATATATCGGGAATGAAAGTACCTTGGATGTATGTGGGAATGTGTTTTGCCACATTTTGTTGGCACAACGAAGATCATTGGAGTTATTCAATTAACTATCTTCACTGGGGTGAAGATAAAACTTGGTATGGTGTTCCAGGGAGTAGGGCTGAGGCGTTCGAAGAAACTATGAAGTCGGCTGCTCCTGAGCTGTTTCACTCGCAGCCAGATTTACTTCATCAACTTGTTACAATTATGAATCCAAATATACTGATGAATGCTGGTGTGCCAGTTTACAGGACGGACCAACATGCAGGTGAATTTGTTGTGACCTTTCCAAGGGCATATCACGCCGGTTTTAACCAAGGTTATAACTTCGCGGAAGCGGTCAACTTTGCCCCAGCTGACTGGCTGAGAATGGGGCGGGAATGTGTCTTACATTATTCGCATTTAAGGCGTTTCTGCGTATTTTCGCATGATGAATTAGTTTGTAAGATGGCATTGGATCCGGAAAAATTAGATTTAACTATAGCTGCAGCTACTTATAGAGACATGCTTCAGATGGTCGACACTGAGAAAAAGCTACGCAAGACGCTACTTGATTGGGGGGTAACAAATGCTGAGCGCGAAGCGTTCGAGCTGCTACCTGATGATGAACGTCAATGTGATGTTTGCAAAACAACCTGTTTCCTCTCGGCAATCACCTGTACTTGTTCTCCAGATATATTAGTATGTTTAAGACActataaaaatttatgtgaatGCCCCCCAGAAAAAAGAACCCTTCGTTATAGATATACTTTAGATGAACTACCTGTGatgttaaaatctttaaaactaAAAGCTGAATCGTTTGACCACTGGGTCAGTAAGGTGAAAGACGCTCTTGACCCAAAAACGCCAAAAACAATGAATTTAGCGGACCTTAAAGCGCTATTAAGTGAAGCTGAAGGTAAAAAGTTCCCCAAGTCTGAGCTTCTGCAAACTTTAACAAGTGCTGTAGAAGATGCGGAAAAATGCGCAAGCGTTATACAACAGCTAGACCTTAACAAAATGCGAACTCGAACTAGAAACTCCGGTGACACCAAATACAAACTTACCGTGGAAGAATTAACTTTATTCTGCGAAGAAATCGATAGTCTAGCATGCATTCTGGAAGAGGCGAAAAGTATAAGAGAATTGCTtcgggaaacaaaaaaattcgaaaatgaAAGTGCAAGGTTATTGGCTCTTCCACTAAAAGAATGCAACTTAACGGATCTAGAGGCTTGTCATAGTCACGGTAGTGGTCTCTGTATTGAATTGCCACACCTGAAAAACGTTACGACCAGAATAAAGCAGGTCCAGTGGTTAAGGGATGTTGAATCGTACAAAAAGAAAACCGAAGTTTTAGGTTTAGAGTCGATTAAAAACTTAATTGACACAGGCACTGAATTACCTCCCACAAGAGAAATGGAAGAAGAGTTGAGTAACTTACAGGGAATCTTAAGAGAGAGTGAAGAGTGGGAAGAAAAGGCACAAACAGTTCTAAAATCGAAAGATAACAATGTTCTAATACAAGttgataaattattaaaagaatcTTCTAAAATAACTTGTTATCTTCCAAGTGAGGGGCATTTGTATGAGTCAATGAAGAAAGCGAGAGATTGGCTGCGAATGTTAGAAGAAATGAATTCTGCTGAATATTATCCTTACTATAATATTATGGAAGAGTTAATTAAGAAAGGGAGAATTTTAGCCTTATATTTAGTGGAAGTGGATAAAATGAACGATTACCTTATCCTTGCTAGTGGTTGGAGGGAACGAACTTGCCGGGCGTTTTTACGTAAAAACTCTTCAATGTCACTAATGGAAGCGCTATCTCCCAGAATCCACCCTCCTTCCCATAAAAAGAAAAGAAAGGAAGACGAGTTTGAGAATATTATCCTAGCAGACAATATGGATCCTGCAACCGTTGTTGCAGTGTTCAAAGACGCAGAAGACACTGAAATGGACATGCTGCGCAAACTCCGAATAACCAACGGCGAAAAGAGCCTCAGCCCTAACGATGCAGAAACGTTCTGTATCTGCAACAAAAGCCTCCATGGGGTTATGATGAAATGCGAGTTGTGCAGAGATTGGTTCCATTCATCATGTGTTCAGCTACCAAAAATTTCATCTTCCAAGTTTAAAGGAAACATCACCACTCTAGCCTTACATTTAGGGTTTAAAGACTGTAAATACGTATGTCCTGCCTGCTGTAGAACAAAACGACCCCGCTTGGACGTCATTTTGGGATTACTAATGTCATTACAAAAGTTATATGTGCGTTTGCCGGAAGGTGAAGCTTTACAATGTTTAACTGAACGAGCTATGAATTGGCAAGACAGAGCTAGACAATTATTAGCCAATCCAGAGCTTGAAGCTGCCAAAACCAAGCTGTATAATTATAGTCAAAAGTATACTGAAGCTGCAGCAAGGCAAagaactgaaaaaattatatcaacAGAACTAAAAAGGGCGTTTAAAAATCCGGAATTGCATCAAAGGGTTCAGGAAATAGCGCCTTATAGTGGCATCACGGATGATGGTCCTAGCACGACAACAGCTGATTCTCACGATTCAGACGAATCAACTAGAGAGGATTCAGATGACAGGATGGGAGAACATGCTTATTCCTTACATATTCCCAAAATGGAGGGAGATGACTGCGTTTTAGGTCTAAGTCCGGACCTGAGAGCTCAAGTGGAAGAACTTCTAATGGAAGGAGACCTTTTGGAAGTTTCTTTGGACGAAACGTTTATGTTATGGAAACTTATACAAGCATCACGGGATCCGGAAAAAGAAGTTATTCTAATTGATTTTGATgCCCATTTGAAAAAGGAACCGAAAAAACGCGGTAGAAAGCGCTTGTCCGAGGAAGTAGCGGACACCACCACCGGTAAAAAGAAAGCCGGGAAAACAGAGCCCACCGAGAAAAAGGTCCGAGGTAGAAAATCGAAAGAGGCCGTCGCAGCACGGAAAAAGACgaagcgccgcaggcgacaaTCTTCGGGCTCTGAAGATGAGGACGAAGATGAGGTGTGTGCGGCTGCAGGGTGCTTAAAACCGCTCGGTCAGAACGTCGATTGGGTGCAATGTGATGGGGGCTGCGAGCAGTGGTTCCACATGGCCTGCGTGGGCCTTTCAGCAGAGGAAATTAACGAAGATGAAGACTATATTTGTATGAGTTGTTCAAAGAATACCTCGTACGAAAATATTAATGATATGAGCAGGTCCAGTAGCCCTGTGTCCCCTGATTCTACACAACCTTCCACATCATTGAAAGACACTTGTTAG
Protein Sequence
MTTKVEKLITNGIKCHSVGSSTSKTSSPVKSSNNSSFSKEEAAEFEIPPEAPVFYPTEEEFLDPLAYISKIRHIAENTGICKIKPPANWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHNIVQLEGGFEYATKDRKWSKIAIRLGYPAGKSIGTILKTHYERLLFPFDVFKQGKSVNNIKLEENKDEMEKFDRDYKPHGIVGRMAIKPPTEKMARRSKRFEVPECKTDKLDFKIENKDDLDDLHNKELRRLQFYGAGPKMAGFPDKTENKRGKKSKMEFDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLLPPLQEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVDATTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTNTSMNLFHGDKEYADSSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEDKTWYGVPGSRAEAFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDPEKLDLTIAAATYRDMLQMVDTEKKLRKTLLDWGVTNAEREAFELLPDDERQCDVCKTTCFLSAITCTCSPDILVCLRHYKNLCECPPEKRTLRYRYTLDELPVMLKSLKLKAESFDHWVSKVKDALDPKTPKTMNLADLKALLSEAEGKKFPKSELLQTLTSAVEDAEKCASVIQQLDLNKMRTRTRNSGDTKYKLTVEELTLFCEEIDSLACILEEAKSIRELLRETKKFENESARLLALPLKECNLTDLEACHSHGSGLCIELPHLKNVTTRIKQVQWLRDVESYKKKTEVLGLESIKNLIDTGTELPPTREMEEELSNLQGILRESEEWEEKAQTVLKSKDNNVLIQVDKLLKESSKITCYLPSEGHLYESMKKARDWLRMLEEMNSAEYYPYYNIMEELIKKGRILALYLVEVDKMNDYLILASGWRERTCRAFLRKNSSMSLMEALSPRIHPPSHKKKRKEDEFENIILADNMDPATVVAVFKDAEDTEMDMLRKLRITNGEKSLSPNDAETFCICNKSLHGVMMKCELCRDWFHSSCVQLPKISSSKFKGNITTLALHLGFKDCKYVCPACCRTKRPRLDVILGLLMSLQKLYVRLPEGEALQCLTERAMNWQDRARQLLANPELEAAKTKLYNYSQKYTEAAARQRTEKIISTELKRAFKNPELHQRVQEIAPYSGITDDGPSTTTADSHDSDESTREDSDDRMGEHAYSLHIPKMEGDDCVLGLSPDLRAQVEELLMEGDLLEVSLDETFMLWKLIQASRDPEKEVILIDFDAHLKKEPKKRGRKRLSEEVADTTTGKKKAGKTEPTEKKVRGRKSKEAVAARKKTKRRRRQSSGSEDEDEDEVCAAAGCLKPLGQNVDWVQCDGGCEQWFHMACVGLSAEEINEDEDYICMSCSKNTSYENINDMSRSSSPVSPDSTQPSTSLKDTC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-