Basic Information

Insect: Brachyptera risi
Gene Symbol: stc
Assembly: GCA_964007535.1
Location: OZ023329.1:47169474-47187062[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 3.9e+04 -4.2 1.6 15 19 389 393 388 393 0.81

2 15 0.11 1.4e+03 0.5 0.4 4 10 422 428 421 428 0.95

3 15 8e-07 0.01 16.9 11.7 3 19 442 458 441 458 0.93

4 15 1.4e-07 0.0019 19.3 9.3 1 19 494 512 494 512 0.97

5 15 0.83 1.1e+04 -2.3 1.3 8 13 517 522 517 523 0.82

6 15 3.4e-08 0.00045 21.3 11.5 1 18 552 569 552 570 0.98

7 15 3 3.9e+04 -4.4 1.3 5 12 599 606 599 606 0.81

8 15 3.8e-06 0.049 14.7 13.0 4 19 617 632 610 632 0.87

9 15 3 3.9e+04 -4.5 1.4 5 10 661 666 661 666 0.90

10 15 0.0026 34 5.7 8.2 1 11 672 682 672 683 0.96

11 15 2.7 3.6e+04 -4.0 0.9 4 10 687 693 687 693 0.86

12 15 2.3e-07 0.003 18.6 18.0 1 18 699 716 699 717 0.98

13 15 2.1 2.8e+04 -3.6 6.1 14 19 769 774 761 774 0.71

14 15 1.8e-06 0.023 15.8 6.3 1 15 810 824 810 827 0.95

15 15 0.00018 2.3 9.4 11.7 1 19 842 861 842 861 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	3.9e+04	-4.2	1.6	15	19	389	393	388	393	0.81
2	15	0.11	1.4e+03	0.5	0.4	4	10	422	428	421	428	0.95
3	15	8e-07	0.01	16.9	11.7	3	19	442	458	441	458	0.93
4	15	1.4e-07	0.0019	19.3	9.3	1	19	494	512	494	512	0.97
5	15	0.83	1.1e+04	-2.3	1.3	8	13	517	522	517	523	0.82
6	15	3.4e-08	0.00045	21.3	11.5	1	18	552	569	552	570	0.98
7	15	3	3.9e+04	-4.4	1.3	5	12	599	606	599	606	0.81
8	15	3.8e-06	0.049	14.7	13.0	4	19	617	632	610	632	0.87
9	15	3	3.9e+04	-4.5	1.4	5	10	661	666	661	666	0.90
10	15	0.0026	34	5.7	8.2	1	11	672	682	672	683	0.96
11	15	2.7	3.6e+04	-4.0	0.9	4	10	687	693	687	693	0.86
12	15	2.3e-07	0.003	18.6	18.0	1	18	699	716	699	717	0.98
13	15	2.1	2.8e+04	-3.6	6.1	14	19	769	774	761	774	0.71
14	15	1.8e-06	0.023	15.8	6.3	1	15	810	824	810	827	0.95
15	15	0.00018	2.3	9.4	11.7	1	19	842	861	842	861	0.97

Sequence Information

Coding Sequence: ATGGCTAGTTGGAATGGTTCGTCAATTGAAGGGAATCAAAGCAATTCGGGATCAGGCCTTGGTCTTCCTGCTGCTTTTCCCAGAAGTACAAGACATCAGTCGAGAGGTGGTAATTCTAGACAATATAATGTACAGCGAAACTCTGGATATCAAAATTCACCAGTGTCGCTAGCAAACGAAAATCTACCCGCAGTAGACAATGTTCCTCGTACTAGTGAAAGAATATATACATTGACAGATTCAGAACTAGCAATAGCAGCTAGTTCTAATTTAACACCAACTGCTGGTGAATTTGTTCCACGTTCCCAATTGTCTCAAATTCAGAAGAAGAAACCAGTTCCAGTACAAAAAGCTCAAGAAACTCGTCCTActaaaacagtgtatcaaaatgGTCCACAAAATAAAAGACAAGATACGAGATATTCACAGCCGGGACGAAGTCAAGAATTTTCCAACCGTAGAGGATTTGATTCCAATCAGAGAAGTTATTGTGTGGAAGATTCTAAGACGCATGATCGTGAAAGACTTCTGTCTGAAGCTGCTGCTTTTCTTACTTCGATGTCAAATCCAGAAGCGGCACACATTTCCGTTGAAAGTAGTACCGGTAACAGCAGTAGCAACACTGTCCGAGAAACTCAACGTGATGTCAGTGGTGATACCGGTTCAAGATATCGAAACAATGGCAATTACCAAGGCAACAGAGATGGGAGCAGTAATATTCATAGCAGTAGAAACCAACAACAGATGAAATATGATAATGCCTATCGACGTCGCACTCCTGAGCCTTACAACAAGGGTTACCAGTCTCAAGGCGGCAATAACTGGAGAGGTAACGTCAAAGGAACAGTCTATTCCACGGAAACGTTTACCGGTACTAATTCGAGAAGTGCTCAACAAAGTCGACAGGGTAATGGATATTCAAGCAACCATTCGTCGCCTCGTCGTGAGCAAAGAGACACATTCCACTCAAATAAAGACGACGACGCAAGCCAGCGTGAGCGTCTGATTGATCAGCTGGGTCGGGGAACGTTGGAGTGTTTGGTTTGCTGCGATCGCATCCGACAGCAGGAGGCGGTCTGGTCGTGTACGCAGTGCTTCCACGTGCTTCATTTGCGATGCGTCAAAAAGTGGGCGTTCACGTCAAAAGCAGATAACGGATGGCGGTGTCCTGCCTGCCAGTTTGTCACAGCGAAAGTTCCTTCCGAATATTATTGCTTCTGCGGACAGGTGCGTGATCCCGAGTACGACCGTCAGGAGGTGGCTCACTCTTGCGGAGAAGTCTGTAACAAGAGCCGCGCGTCTAGGATTGAATCGGCACATTGCATACATCGGTGCACTCTGCTGTGCCATCCAGGGCCATGCCCCATCTGCACGGCGCAAGTAAAACGAGAGTGCGGGTGCGGAGCGACGTCGCAGATTGTCAAGTGCGGCGGCGATGCGGTGCTGCTGTGCGAAGGCGTGTGTGGCAAGAAGCTGAACTGCGGGCAGCACGCGTGCGAGATGACGTGCCACATGGGCGACTGCGATCTGTGCCAGAAGCCGGTCGTGCAAGTGTGCCACTGCGGCGCCAGCAGCCGCGAGCTCGTGTGCACGGTCGACACGGCCCGCGTGACGGCGTTCGAGTGCGAGGGGCGGTGCGACAAGACGCTGGCCTGCGGCAACCACGCGTGCGAACGCCAGTGCCACCCGGGCGCGTGCGACGCGTGTGCGCTGACCCCCGACGCCATCAAGACGTGCCCGTGCGGCAAGCAGGTGCTGCGCGATGCGCGCAAGAGCTGTCTCGACGAGGTCCCGACATGCGGGGCGATGTGCTGCAAGAAACTCGCCTGCGGACAACCAAGTTCGCCCCACGAGTGCCAGGTGGTGTGCCATTCGGGGGCGTGCCCCGACTGCCCGCTGTCCACGCTCGTACGATGTCGGTGCGGCAACATGGACAGGGAGATTCCGTGCACCGAGCTGACGACCAAGGCAGACGACGCGAGGTGCAGCAAGAAGTGTGCAAAGAAACGTGCGTGCGGTAAACACAAGTGCAATCAAATGTGCTGCATCGACCTTGACCACGTCTGTCCGCTGGTTTGTAACCACCAGCTGTCTTGCGGCCGCCACAAGTGCGAGCTTCTCTGCCACAGAGGGCACTGTAAGCCGTGCCACAGAGTCGGTTGGGAGGAGTTGTTCTGCGAGTGCGGTAAGACCGTGACGCTGCCGCCGATACCGTGCGGCACCCGCCCGCCCGAGTGCACCAACCCATGTTCGCGCGCGCACATCTGCGACCACCCGCCACAGCACAATTGCCACAGCTATCCCCAGTGCCCACCGTGCACCATATTCACTTCCAAGTACTGCTACGGTAAACATCTGCTGCGTAAGAACGTGCCATGCTACCTGACCGAGATATCGTGCGGGCTGGCGTGCGACAAGGCCCTGCCGTGCGGCCGCCACAAGTGCATCCTGCCGTGCCACATGGGCGTGTGCCTGAAGCCGGGCGCGCGCTGCGTCCAGGCGTGCACGACCCCGCGCGTGCTGTGCGGACACGTCTGCAACGCGCCATGCCACGACGCCAACTGTCCCGACACCCCGTGCAAGGAGATGGTGAAAGTGACGTGCGAATGCGGCAACCGGTCGGTGAGCCGAGCGTGCGCCGACAACGCGAAGGAGTACCAGCGTATCGCCACCAGCCTGCTCGCGTCCAAGATGGCCGACATGCAGCTGGGGCACACGGTGGACATCGCTGACCTCGCCGGCTCGAGGAAGATGAGCCTTAAAACGTTGGATTGCAACGAAGAATGCAAAGTGCTCGAACGTAACAGACGTCTTGCCATCGGACTGCAGATCGTTAACCCCGACCTCTCGGCCAAGTTGACCCCGCGGTATTCCGAGTTCATGCGCGGCTGGGCCAAGAAGGATCCGTCATTCTGTAAAATGATACACACCAAACTGACCGAGCTGGTGCAATTAGCGAAACAGTCCAAGCAGAAGAGCCGCAGCTACTCTTTCGAGCCGATGAATCGCGACAAGCGCCACTTTGTGCACGAGTGCTGCGAGCACTTTGGCTGCCAGTCGGAGGCGTACGACCCCGAGCCGAAGCGCAACGTCGTGGCGACGGCGGTGCGCGACAAGGTGTGGCTGCCGAGCATGAGCCTCATGGAGGTGATTCAGCGCGAGAACGGGGTACGCAAGATACCCAAGCCTGTCATTAACTTCACAAGTTCAACGACGACCATAGTCACGGGCACCGCTCCCAACACAGCGTGGCGAAGCATTCCCGCTCCCGTTGTGACCCCAAGCGTTGCCGCGCCGACGTCAACGCCCGTTTCCGGGGCCTCGGAACCGATCGACTACTTTGACTTCACATCTTGA
Protein Sequence: MASWNGSSIEGNQSNSGSGLGLPAAFPRSTRHQSRGGNSRQYNVQRNSGYQNSPVSLANENLPAVDNVPRTSERIYTLTDSELAIAASSNLTPTAGEFVPRSQLSQIQKKKPVPVQKAQETRPTKTVYQNGPQNKRQDTRYSQPGRSQEFSNRRGFDSNQRSYCVEDSKTHDRERLLSEAAAFLTSMSNPEAAHISVESSTGNSSSNTVRETQRDVSGDTGSRYRNNGNYQGNRDGSSNIHSSRNQQQMKYDNAYRRRTPEPYNKGYQSQGGNNWRGNVKGTVYSTETFTGTNSRSAQQSRQGNGYSSNHSSPRREQRDTFHSNKDDDASQRERLIDQLGRGTLECLVCCDRIRQQEAVWSCTQCFHVLHLRCVKKWAFTSKADNGWRCPACQFVTAKVPSEYYCFCGQVRDPEYDRQEVAHSCGEVCNKSRASRIESAHCIHRCTLLCHPGPCPICTAQVKRECGCGATSQIVKCGGDAVLLCEGVCGKKLNCGQHACEMTCHMGDCDLCQKPVVQVCHCGASSRELVCTVDTARVTAFECEGRCDKTLACGNHACERQCHPGACDACALTPDAIKTCPCGKQVLRDARKSCLDEVPTCGAMCCKKLACGQPSSPHECQVVCHSGACPDCPLSTLVRCRCGNMDREIPCTELTTKADDARCSKKCAKKRACGKHKCNQMCCIDLDHVCPLVCNHQLSCGRHKCELLCHRGHCKPCHRVGWEELFCECGKTVTLPPIPCGTRPPECTNPCSRAHICDHPPQHNCHSYPQCPPCTIFTSKYCYGKHLLRKNVPCYLTEISCGLACDKALPCGRHKCILPCHMGVCLKPGARCVQACTTPRVLCGHVCNAPCHDANCPDTPCKEMVKVTCECGNRSVSRACADNAKEYQRIATSLLASKMADMQLGHTVDIADLAGSRKMSLKTLDCNEECKVLERNRRLAIGLQIVNPDLSAKLTPRYSEFMRGWAKKDPSFCKMIHTKLTELVQLAKQSKQKSRSYSFEPMNRDKRHFVHECCEHFGCQSEAYDPEPKRNVVATAVRDKVWLPSMSLMEVIQRENGVRKIPKPVINFTSSTTTIVTGTAPNTAWRSIPAPVVTPSVAAPTSTPVSGASEPIDYFDFTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00242834;
90% Identity: iTF_00242834;
80% Identity: -