Bris010334.1
Basic Information
- Insect
- Brachyptera risi
- Gene Symbol
- -
- Assembly
- GCA_964007535.1
- Location
- OZ023328.1:7428455-7429918[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00058 7.5 7.8 0.6 5 13 24 32 23 40 0.90 2 13 0.00058 7.5 7.8 0.6 5 13 60 68 59 76 0.90 3 13 0.00058 7.5 7.8 0.6 5 13 96 104 95 112 0.90 4 13 0.00058 7.5 7.8 0.6 5 13 132 140 131 148 0.90 5 13 0.00058 7.5 7.8 0.6 5 13 168 176 167 184 0.90 6 13 0.00058 7.5 7.8 0.6 5 13 204 212 203 220 0.90 7 13 0.00058 7.5 7.8 0.6 5 13 240 248 239 256 0.90 8 13 0.00056 7.3 7.8 0.4 5 13 276 284 275 285 0.90 9 13 0.00058 7.5 7.8 0.6 5 13 312 320 311 328 0.90 10 13 0.00058 7.5 7.8 0.6 5 13 348 356 347 364 0.90 11 13 0.00058 7.5 7.8 0.6 5 13 384 392 383 400 0.90 12 13 0.00058 7.5 7.8 0.6 5 13 420 428 419 436 0.90 13 13 0.00049 6.4 8.0 0.2 5 13 456 464 455 466 0.90
Sequence Information
- Coding Sequence
- atgtgtcaacCAATCAGCAACAAGAACCCACATTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCGACAAGAAGCCACATTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCGACAAGAAGCCACATTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCAACAAGAACCCACATTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCGACAAGAAGCCACGTTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCAACAAGAACCCACATTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCGACAAGAAGCCACGTTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCAACAAGAAGCCACGCTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtttcaacCAATCAGCGACAAGAAGCCACATTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCGACAAGAAGCCACGTTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCGACAAGAAGCCACATTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCAACAAGAAGCCACTTTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCGACAAGAAGCCACGTTTAGAACATGAGCGGGTCGGCTTCAAACTGCCTGGCCGCTGTCAGGCATTATGTCACTAcggttctattttcaaaatgtgtcaacCAATCAGCCACTATTGGGTTTCAAACCAACTCCGTATAACTTCCAACTAA
- Protein Sequence
- MCQPISNKNPHLEHERVGFKLPGRCQALCHYGSIFKMCQPISDKKPHLEHERVGFKLPGRCQALCHYGSIFKMCQPISDKKPHLEHERVGFKLPGRCQALCHYGSIFKMCQPISNKNPHLEHERVGFKLPGRCQALCHYGSIFKMCQPISDKKPRLEHERVGFKLPGRCQALCHYGSIFKMCQPISNKNPHLEHERVGFKLPGRCQALCHYGSIFKMCQPISDKKPRLEHERVGFKLPGRCQALCHYGSIFKMCQPISNKKPRLEHERVGFKLPGRCQALCHYGSIFKMFQPISDKKPHLEHERVGFKLPGRCQALCHYGSIFKMCQPISDKKPRLEHERVGFKLPGRCQALCHYGSIFKMCQPISDKKPHLEHERVGFKLPGRCQALCHYGSIFKMCQPISNKKPLLEHERVGFKLPGRCQALCHYGSIFKMCQPISDKKPRLEHERVGFKLPGRCQALCHYGSIFKMCQPISHYWVSNQLRITSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -