Basic Information

Insect: Brachyptera risi
Gene Symbol: L
Assembly: GCA_964007535.1
Location: OZ023326.1:17855125-17866567[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 23 0.41 36 6.1 5.9 1 23 3 25 3 25 0.98

2 23 2.1e-06 0.00018 22.8 4.3 1 23 31 53 31 53 0.99

3 23 1.9e-05 0.0017 19.8 0.3 1 23 59 81 59 81 0.98

4 23 0.0012 0.11 14.1 0.1 1 23 113 136 113 136 0.95

5 23 0.0035 0.31 12.7 0.2 1 23 243 266 243 266 0.92

6 23 1.4 1.3e+02 4.4 0.2 3 23 387 407 386 407 0.97

7 23 2.9 2.6e+02 3.5 0.1 3 11 453 461 451 462 0.89

8 23 0.13 12 7.7 0.3 3 23 487 508 485 508 0.92

9 23 1.5 1.3e+02 4.4 0.3 1 23 513 536 513 536 0.92

10 23 8.8 7.8e+02 2.0 0.8 1 17 586 602 586 608 0.76

11 23 0.22 20 7.0 7.6 1 23 612 634 612 635 0.96

12 23 5.3 4.7e+02 2.7 3.7 2 23 692 715 691 716 0.88

13 23 0.006 0.53 11.9 4.6 2 23 730 751 729 751 0.96

14 23 0.11 9.7 7.9 0.5 1 23 761 783 761 783 0.97

15 23 0.4 35 6.2 1.1 2 23 791 812 790 812 0.96

16 23 0.00034 0.03 15.8 0.1 1 23 919 942 919 942 0.95

17 23 0.51 45 5.8 0.2 1 23 946 968 946 968 0.97

18 23 0.26 23 6.8 2.6 1 23 976 998 976 998 0.96

19 23 0.0099 0.87 11.2 0.4 1 23 1006 1028 1006 1028 0.97

20 23 1.4 1.2e+02 4.5 2.0 1 23 1035 1057 1035 1057 0.96

21 23 0.00026 0.023 16.2 0.4 1 23 1111 1133 1111 1133 0.98

22 23 6.3e-05 0.0055 18.2 1.7 1 23 1143 1165 1143 1166 0.94

23 23 0.025 2.2 10.0 0.6 1 23 1214 1237 1214 1237 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	23	0.41	36	6.1	5.9	1	23	3	25	3	25	0.98
2	23	2.1e-06	0.00018	22.8	4.3	1	23	31	53	31	53	0.99
3	23	1.9e-05	0.0017	19.8	0.3	1	23	59	81	59	81	0.98
4	23	0.0012	0.11	14.1	0.1	1	23	113	136	113	136	0.95
5	23	0.0035	0.31	12.7	0.2	1	23	243	266	243	266	0.92
6	23	1.4	1.3e+02	4.4	0.2	3	23	387	407	386	407	0.97
7	23	2.9	2.6e+02	3.5	0.1	3	11	453	461	451	462	0.89
8	23	0.13	12	7.7	0.3	3	23	487	508	485	508	0.92
9	23	1.5	1.3e+02	4.4	0.3	1	23	513	536	513	536	0.92
10	23	8.8	7.8e+02	2.0	0.8	1	17	586	602	586	608	0.76
11	23	0.22	20	7.0	7.6	1	23	612	634	612	635	0.96
12	23	5.3	4.7e+02	2.7	3.7	2	23	692	715	691	716	0.88
13	23	0.006	0.53	11.9	4.6	2	23	730	751	729	751	0.96
14	23	0.11	9.7	7.9	0.5	1	23	761	783	761	783	0.97
15	23	0.4	35	6.2	1.1	2	23	791	812	790	812	0.96
16	23	0.00034	0.03	15.8	0.1	1	23	919	942	919	942	0.95
17	23	0.51	45	5.8	0.2	1	23	946	968	946	968	0.97
18	23	0.26	23	6.8	2.6	1	23	976	998	976	998	0.96
19	23	0.0099	0.87	11.2	0.4	1	23	1006	1028	1006	1028	0.97
20	23	1.4	1.2e+02	4.5	2.0	1	23	1035	1057	1035	1057	0.96
21	23	0.00026	0.023	16.2	0.4	1	23	1111	1133	1111	1133	0.98
22	23	6.3e-05	0.0055	18.2	1.7	1	23	1143	1165	1143	1166	0.94
23	23	0.025	2.2	10.0	0.6	1	23	1214	1237	1214	1237	0.96

Sequence Information

Coding Sequence: ATGCCGTTCAGGTGCGAGTTCTGCAGCCGGCTATTCAAGCACAAGCGCAGCCGCGACCGACACATTAAGCTGCACACGGGCGACAAGAAGTACAGGTGCACGCACTGCGAGGCAGCTTTCTCGAGAAGCGATCACCTGAAAATCCACATGAAAACCCACGACAACCAGAAACCGTTCCAGTGCACGATCTGCAACCGCGGCTACAACACGGCCGCCGCCCTCACCTCTCACATGCAGAACCACAAGAAGGACCAGCATCAGCCCCCGAACGGTCACCCGCCCAGCAACAGCAGCCGCGCCAGCAGCACCAACACGCCCAGCCCGGGCTGCCCCACCTTCCGGTGCCTGCAGTGCGGCGACGTGTTCCGCCGGCCCGAGGAACTCCAGGGCCACATGGTGTCGCAGCACCGCATGGACTTGGCCCGGGGCCTGCTCGGAGGCCTGATGCTCGGCGAGGTGCCCGCGGTGCGCTCGCCGATGGCGTTTCCCACGCCCAAACTCGCGTGCATCTACTGCACCAAGGACAGTTTCTCGACGATGGAGGCGTTACAGTTGCACGTGCAGGCCATGCATGGCTCGATCCTGAACGGGGACATGCGCGACTTTTCCAGCCTGACTCCGCGTCATCACCACCAAGCCAGCCCCAGCCCCGTCTTGCTCCCGCCCCACCACATGACGTCACCGAACGGCGTCACCAACAGCCACACGGCGACGTCACTGATGCCATTCACCTGCGATCTGTGCACCATGCGCTTCAACACGCTCCAAGGCCTGCAGAAACACGTGATCGGCGTGCACGGACGCGCGAGTCCGAGTCACGGCAAGGATCACCATAACGACGCCAATAATTCTATACCGGGACTATTCTGCATCCAGTGTTCCATGTCATTTCCTTCGGCGACATTGTTTGCGGATCATTATGTCCTCATGCACGGCCCTCTGAATGGAACTGGTATGATGAACTCTTCGCCTCCAATGCCTGAACAACTCAAGCCTACCGATTTGAGTAAGAAATCGCACAGACATTCCAAGCATAGTGACGAAAGACATCCGAAGAGACAAAAGGTTTCACAGGAAAATGTTATCCCGTCGTCGAACGCGGATTCTACGACTCCGTCGGGCTTAGCGAATCAATATGACCATCCAGGTACTCTTCTTTGTAACCAGTGTAGTGCTGCTTTGCCAGACTTTGAATCGTTCCGTAACCATCTCAAAGCTCATTTAGAGGAAGCGGGTGGTTTGCGTGGCCTTCTTGGAGGAGCCGGCAGCATGGAGCTGATGGGATTACTTGGTAGTTCTGACAATCGCGTGAATAACGTTTCCAAAAGTCCTGTCACGTCGTCCGGTGCTCTAGCGTGTCCACATTGCGGTGCTAAATTTTCTGGCGGGGCAGAGGAGCATCAGCTCTTCGAGCAACACGTTGCCACGCATTTCATGGCGACGGCAACCGAGTACGGCTGTCAGAGCTGCATGAAGCTCTTCTCAAAGCCTGACGAACTGCAGAAACATCTCATGGACATCCACGCTCATCATCTCTACCGCTGTTCACTCTGCAAAGACATGTTCGACTCGAAAGTCGCCATCCAAGTCCACTTTGCAGTGAAACACAGCAACGAGTGTAAGCTGTTCCGTTGCACGGCGTGCGCCTCGTCCAACTCTGTGTACCGGACGGAGATGGAGTTTGGCGCTCACGTCCGTAACACTCACGCATTGATGCCCATTATGGGCACGCCGACCAATAAACCACATCCTCAGCATCGGTGTCTGTTTTGTCATTTGAGCTTCGCTTCCGAATTGGAAATGCAGTTTCATCTCGCCGCTCATTCCAAACAGTATCACTGCCACCTCTGTCAAGAGGCGTTCCACGTCGAGTTCCTCCTTGACAAACACATGCAGACGCATCACAGTAATGGTTCCGGCCTTTCTGATAACCTGCAGCAGAAGTCGCCAAAGATCAAGAGCAATAGCACCACGTCTTCGATATCGAGCAGTAACAACACCCCAGTCTTGAACAATACCCACGCGGGCAATGACAGTGGTAACAAGAAGGTTGAGCAGAATTCGAGTGGGTGTAGCTGTGATATTTGTGATCGTTGCGATTTCATCAGCGAGGCCGAGCTGCAGTCGCACAGGAAACTGGTTCATCACGTGAAGCCGACCGCTGGCAAGAACGGCGCCGTGTCCTTGCACTGTGCTTACTGCAGTGAGAACTGCAAGTCTCGCACGGAGTTGGAGAACCACATGAAAACCCATTCCCAAGGATCCGGTGTTTCCGGCAAACACAAGTGCAATATATGTGATGAACTGTGTCCTTCAGCAGCAGTTCTTGCAGAACATAAACTAACCCATTGTAAAGTTGTCTCTGGTAGTACCTGTACGCAATGCAAGGCTAATCTGACCAACGAAGACCAGTTCTATTCTCATCTTCAACAACAtagtacaaataataataataacagttcaAGCAACAATCAACAGCTATTGTTGCCTACGCCGTGCGTTGTCTGTAGGCAGACTTTAATATCGGATATTGAAGTTCGAATGCACGCAAGATTCCACCTGAAGAATTCCTCGCTGACCACATCAGAGTCGTTATATCAGTGCTGTTTGTGCCTGAAACAGTACGACATCCATAACTTGGTCATGGCCGGCGGAGCTAACGGAGTCATGCAGACCCCGACGTACGTGTGCAAAGAGTGCTACCACGTGCACAGGAAAACCTCGTCATCCGAGTTGCATCAACAAGAGGAAGTATTTCGATGTTCAGAGTGTCAAGTGAAATTCGAATCATCTTCCGCATTGGAGGCACATCTTGTGAGTGTCCACCGAAAGACTTACCAATGCATTAAATGTCAAGTGAGTTTCGAAACGGAACGAGAAATCCAGCTCCACGTTGCCACACACATGCTGACCGAGGGAAGTAGTCACGAGTGTCATCTTTGTCGCCGCCACCTCGCCACGCCGCTCAAGCTTCAAGCCCATCTCATCGAGCACACCTTTGCGGGGTGTGGAAGTTTCACTTGTTACCTCTGCAGTGCCGTGTTCACCGCTGCACAGGGGCTTCAACACCACATGCTCGAGCATGGTCTAGCAGCCAGGCCGTACGATTGCACACGATGCAGTTTGCGCTTCTTCTTCCGCGCTGAACTCGACAACCACAGCTTCACGCATCTGGATGAAGACGCTGTGAACGCCATGGCAGCCAactatcatcatctcaataacaACGGTATTTACGACATACCGGAGAGTGTCCATTATTACAAGAAATCAGAATCGATTAAACAGAAATCAAAGAAGAGTAGTTCTAATGGTAAAGGCTCACCAATGTTCAAATGCTCGGAGTGCAACAAAGAGCTGAGTAGTGCTTTAGGCCTTCAGGCTCACCAACGATACCACAAGCACTCCTCGAGTAGCAAGAAGGCCCATGCTTGTTTTGAGTGTGGCAAAGAGTTTGCTCTTGCGCGCAACTTGAGCGTGCACATGCGTTCCCACCACGGCGACCACAATGGCGAAGACGTGTCGGAGGATGCGAACACTTCCCTCGAAGATCCCGTGAGCAGCAATAAAGCGAGTTGCCCAGTGTGCAGAAGCGACTTTGCGGAAGATTTGCTTGAGGCTCACATAACCTCCCAGCACTTCCGCTGTCTGCATTGCGGTGACCCATTCTCCCGACAACGCTACGTAGCCGAGCACCTCGCGAAGGTTCACCCGACGGAGCCAAACGCTGCGGACAGCGTGAAGCGAGAACCGAACGAGGTCAAAGACGAGAATCCTGACGGAGATGACGTCGACGTATCGTCGCCGGGCGTCGACCGGCAGTTCGGCGATTCGACGCCACACTCGAGCGGTCGAACGGACGACGATGCCAACGAGTACATGTCTTCACACCGTGGATCTTCTCCCTCGTCGCCCAATAATACGGAGAGCAGCCAGCAATGA
Protein Sequence: MPFRCEFCSRLFKHKRSRDRHIKLHTGDKKYRCTHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKDQHQPPNGHPPSNSSRASSTNTPSPGCPTFRCLQCGDVFRRPEELQGHMVSQHRMDLARGLLGGLMLGEVPAVRSPMAFPTPKLACIYCTKDSFSTMEALQLHVQAMHGSILNGDMRDFSSLTPRHHHQASPSPVLLPPHHMTSPNGVTNSHTATSLMPFTCDLCTMRFNTLQGLQKHVIGVHGRASPSHGKDHHNDANNSIPGLFCIQCSMSFPSATLFADHYVLMHGPLNGTGMMNSSPPMPEQLKPTDLSKKSHRHSKHSDERHPKRQKVSQENVIPSSNADSTTPSGLANQYDHPGTLLCNQCSAALPDFESFRNHLKAHLEEAGGLRGLLGGAGSMELMGLLGSSDNRVNNVSKSPVTSSGALACPHCGAKFSGGAEEHQLFEQHVATHFMATATEYGCQSCMKLFSKPDELQKHLMDIHAHHLYRCSLCKDMFDSKVAIQVHFAVKHSNECKLFRCTACASSNSVYRTEMEFGAHVRNTHALMPIMGTPTNKPHPQHRCLFCHLSFASELEMQFHLAAHSKQYHCHLCQEAFHVEFLLDKHMQTHHSNGSGLSDNLQQKSPKIKSNSTTSSISSSNNTPVLNNTHAGNDSGNKKVEQNSSGCSCDICDRCDFISEAELQSHRKLVHHVKPTAGKNGAVSLHCAYCSENCKSRTELENHMKTHSQGSGVSGKHKCNICDELCPSAAVLAEHKLTHCKVVSGSTCTQCKANLTNEDQFYSHLQQHSTNNNNNSSSNNQQLLLPTPCVVCRQTLISDIEVRMHARFHLKNSSLTTSESLYQCCLCLKQYDIHNLVMAGGANGVMQTPTYVCKECYHVHRKTSSSELHQQEEVFRCSECQVKFESSSALEAHLVSVHRKTYQCIKCQVSFETEREIQLHVATHMLTEGSSHECHLCRRHLATPLKLQAHLIEHTFAGCGSFTCYLCSAVFTAAQGLQHHMLEHGLAARPYDCTRCSLRFFFRAELDNHSFTHLDEDAVNAMAANYHHLNNNGIYDIPESVHYYKKSESIKQKSKKSSSNGKGSPMFKCSECNKELSSALGLQAHQRYHKHSSSSKKAHACFECGKEFALARNLSVHMRSHHGDHNGEDVSEDANTSLEDPVSSNKASCPVCRSDFAEDLLEAHITSQHFRCLHCGDPFSRQRYVAEHLAKVHPTEPNAADSVKREPNEVKDENPDGDDVDVSSPGVDRQFGDSTPHSSGRTDDDANEYMSSHRGSSPSSPNNTESSQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00242527;
90% Identity: iTF_00242527;
80% Identity: -