Basic Information

Insect: Brachyptera risi
Gene Symbol: zfpm1
Assembly: GCA_964007535.1
Location: OZ023328.1:51725305-51734792[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.18 16 7.3 3.9 1 23 791 813 791 813 0.98

2 13 0.04 3.6 9.3 0.4 2 23 920 942 919 942 0.95

3 13 0.02 1.7 10.3 0.4 1 23 949 971 949 971 0.97

4 13 0.00047 0.041 15.4 2.9 2 23 974 995 973 995 0.96

5 13 0.00082 0.073 14.6 0.7 1 23 1001 1023 1001 1023 0.97

6 13 8.8e-05 0.0078 17.7 0.5 2 23 1030 1052 1029 1052 0.96

7 13 0.0037 0.33 12.6 4.7 3 23 1090 1111 1088 1111 0.95

8 13 0.00085 0.075 14.6 0.5 2 23 1127 1147 1126 1147 0.97

9 13 0.00026 0.023 16.2 2.6 1 20 1153 1172 1153 1175 0.92

10 13 0.00018 0.016 16.7 1.7 1 23 1183 1205 1183 1205 0.98

11 13 0.0011 0.098 14.2 2.7 1 23 1211 1233 1211 1233 0.98

12 13 2.3e-06 0.0002 22.7 3.7 1 23 1239 1261 1239 1261 0.97

13 13 0.0035 0.31 12.6 6.3 1 23 1267 1289 1267 1290 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.18	16	7.3	3.9	1	23	791	813	791	813	0.98
2	13	0.04	3.6	9.3	0.4	2	23	920	942	919	942	0.95
3	13	0.02	1.7	10.3	0.4	1	23	949	971	949	971	0.97
4	13	0.00047	0.041	15.4	2.9	2	23	974	995	973	995	0.96
5	13	0.00082	0.073	14.6	0.7	1	23	1001	1023	1001	1023	0.97
6	13	8.8e-05	0.0078	17.7	0.5	2	23	1030	1052	1029	1052	0.96
7	13	0.0037	0.33	12.6	4.7	3	23	1090	1111	1088	1111	0.95
8	13	0.00085	0.075	14.6	0.5	2	23	1127	1147	1126	1147	0.97
9	13	0.00026	0.023	16.2	2.6	1	20	1153	1172	1153	1175	0.92
10	13	0.00018	0.016	16.7	1.7	1	23	1183	1205	1183	1205	0.98
11	13	0.0011	0.098	14.2	2.7	1	23	1211	1233	1211	1233	0.98
12	13	2.3e-06	0.0002	22.7	3.7	1	23	1239	1261	1239	1261	0.97
13	13	0.0035	0.31	12.6	6.3	1	23	1267	1289	1267	1290	0.95

Sequence Information

Coding Sequence: ATGGAACCGTCGGCGTGCCCGGTGTGTACGCTGTACTTGCGAGAAGGCATCTCCTTGTACAATCATCTCGACACGCATCCAAAGGAACAAGTCATCGAAGCTCTCATCAGGACTCAGCAGGTTCAGTCGCAACATTTAGTTACCGCGCCAACTACGCAGGCAACACCGTTCTATCAGGCGCCACCACAATGCTATCCTGTTCAACAATTTTCTGGAAATTCTTTTACTTACCAACAGATTCTTCCAAACAGCGGAATGAATTCGTCTATTGCACCTGTCACAATGTTAATGCCTCCCAATTCAAATCCCAATCTTATGCAGATGATCTACAATCCATTCCTgatgcaacaacaacaacaacaacaacaacaacaacaacagcagcaacaagtGCAATTAGTTAACTCTCCTAATAACGTACCACTACAACAAGCACCACTCCAAAGGAATGTTTACTCTAATCCCAACGGAAATCCCGACTCCCGTCAGGTTCTTCAATCTTCGGACCCTGTTCCCGTACAGATCAATACTCCCGTATCGGATCACTTCGCGAAAGCACAACCCCGTTGCCATGCCAACACGCCTGTCAAAGGTGTGATCACTGCTTTGCCAGCCCAAACCCAAAATTATAGTTTTCTTCCTAGTAAAGTGAGACCACTTCGACCCGCAACCTGCCACGCAGAGATGCAAGCACCTCCGACTACTGTCTCCACAGTTCCAATCTCTAATGAACACTCTACCGCTGGCTCGAGTAAGCTTCCCATTCTGAAATTTACTCACGATATGGCAACAGCCAAGCCAGTAGTAAATCGCTCAAACAAGATTCAGATTGTGCACATTTTACCGAGTACCGGTAACCCGAATGTCCAATCTCCCCGTCTCAATCATATAGTCATGCCAAAGATTGAAGCAACAACTCACTGGCCAACGAGCGAAGAAGTAAAAGCGACGCAGACCTCCAACAATCGTCCACAAAATCTCATCACCGAACTGCGTGACTTGATTGCTAATAAATCGATCGAACTGACACCTCTCCGATCTCGACCGGTAACGCCAGATAATGACAACAGTGTGATGATTTTACCTTCGTCGTCGGTGGACGCAAAAGACGAGAAACCCAGGTCTTCGAAGATCGGTTCGGTCAACAAGAGAAAACGATCACTTTCAAGTTCTATCAGCAATACTATGAAAAGAAGCACACCTCCGAATATGAGACAAGAATGCATGGACATCGAATTGAGCCGTATTGACCTGACCGATCTTGCGGAGAAAGATTATTACGCCAGTCAACCAGGTGGCTCGAGAGAACAAGAACTTGAAATGGGCTTAACATCAATGGAGCGGGAGCACGAATTAATCTATGACGAAGAAAGTCAAGATTACCCCACGGACATCTCGTGCGCTTCTGAACAAAAGTCCATCAGCCCGGGGCTGGAAGTGAGGAGAGACTCGATTAACGAAGATGATTACGTAAACTTGGATTCTAAAACCAATATCGAGCTACTTTCAGCTGGTCAGGAGTACGACCAATCGCTGAGTCCAGCGTCGGACCACAAGTCCGGCAGGACCAGCCCGGCGTTAAGCTACGAGTCGAGAACAGAAAGTGGCAGCCCAGGGCTGCGAATTCGAACAGATTTGAGCAACAAGTCGGTGCACGCTTTTCCCACGGACAGTTTGTCGAGAAGCCGCGAAGAAATGATCAATGATTTTCTCGAAGACAGCAACGTGGCAGCCAACTTTGTAGACATCGTGCCGAGCAATCTAAGAATCCAGTTGCCCCCCATTAGTGCCACAGATAATGATGAATACATCACCTCCGACTGTGGTTGCCCCAACAACGATGCTgaagtcaacaatgaaaatggGATGCCCTCACCTGTCGCTGCGTCGAGTCCTCAGTCGCGATTTTCAAACGGAAACGACGAATCTGGCAACGGCACAGAAACGACGCGTTATGAATCCGGGAGTCCTATCAACATTATCGAGATCGATGGCATACACATCATGGTACCGAGTCAGTTCTACGAGAAACCTAGTATCGGTGGCTCTCAAGATGATATTGAAATGGTCACGTCGGAGCTTGAACTAGAAAAAGTCGAACCTTCCGCGGAAGCAAACGCTGAGCCGGAACTTGATTGCAAGGGGGACGTAATCAGGGACGCCAGAAACCTAGCAATTCGGAGTGACGACATGAATGTGTCCACGTCTTACGACTTGCTAGCGCGAGAGAGCTGGGGCGAATCCGACGGCTCGGACAACGAGGGCAACGGAGACTGTAACATTTCAGCCATCGATCACTCGTGGGAAGATATCGTAGAGAGCAGACCGATCGTCGAGAAACGCATCGGTAGGGGAagactttcgaaaattcacaaGTGTGCCGTTTGCTCGATGACTTTCAACTGTCCGAAAGAACTTCGAGTCCATCGTAGTACCCACGTGTCGGACAAGGTCGTGGCCTCCGAGACCGAATCCGTTCCCGCCGAGACGACCATCGTCAGTAGCGAGCCTCCCGCGATGAAAGACGACCGAGTCACTGCCGTCAGGACCAGAAGAAAGGTGAAAAGGGTCGTCAAAAAGGTAAACGGTCGCGTCCTGTTTGTCAAGAACGAGGCTTACAAGTTCATGGGCGTTTTCGTGGAAGAAGACGGAATCGCCCTCGAAGACGACGTCGAACGCAAGGCCGACCCGATAGTTTTTCCCGGAGGTTCGGAAATAAAGACGGAACCGGCAGCGATAAAAGTGGAGAAAGCCCTGAAGTGTTTAACGTGTCCCGAGTTATTCACCCTGAGGAAGTACCTAGTCCGTCACGTGCGCCTCGATCACAGCACCGTCGACGGGAAACACATGTGCGACACCTGCCAGGAAATATTTGCCGAAGAAGCAGACTATAATATCCACTTGAAAAAACACCCGCTCGAATGTCGGTCGTGCAGCAAGAACTTCTATCGACGCCAGAACCTGCAGCTCCACATGAAACGTCATCTGGGCATAAAACCTCACGTGTGCGTCGTTTGTAGCAAGGCGTTCATCACGAAACAGAAACTGAGCGAGCACTTGAATGTGCACAGCGGTTTGGCGCCGATCAAGTGCCCGCTGTGTCCGTTGGGATTCCGTCGCTACAGCAACTTGATTCAGCATAAAAATCGTTTCCACTTGAAGCTGAAGAAGAAAGTCAAAGATTACGTGTGCTTCTGCGGAGACATTTTCCACTCGCGGAAGAAGCTCGAGTGGCACAAGGAGATACACGAACGTAAGCCCAAGTGCTGCACGTTTTGCAGCGAACGTTTCGTTCATTCCGCGAGCCTGACGCGCCACGTGCGTCGGGCGCACGACCGTCGCTACATGCCGAAAGTGGGCCGCGAGGGAGAGAATGTCGAGTGTTCGATCTGCGGTCACGTGTTCCTTAAATCAAGTCTTCTCGTCCATATGAGACTTCACAGCGGAGAAAGACCGTTTTCCTGCGCTGTGTGCAATAAACATTTCACGACCAAATGGAATCTACAACAGCACCGCTGGACCCACACCTCTCGTAGTAATAAACCGTTCAAGTGTACCCTCTGTAAGAGCGCCTTCTCCCGAGAGAGTGACTTCACGCAGCACATGGATTCTCACCGCAACAagcgGCAATACACGTGCAACGTGTGCGGCGAGCAGTTTGTCCGCAAGAACAACTGCCAGCGGCACGTGAAGGAGCACGAAGCGGAGAAGCTGTTTGCGTGCAAGGAGTGCGGCAAGAAGTTCCACCGCAACTACTACCTCAAGGACCACATGCGGGTGCACAGCGGAGCCAGGCCCTTCTCCTGCCACATCTGCGGCAAGGCGTCGTCCACAAAGTCGAACCACAACAAGCACGTCAAGATACACCACGCCAGAGAGCCGGTCAACACGGAATCGTAA
Protein Sequence: MEPSACPVCTLYLREGISLYNHLDTHPKEQVIEALIRTQQVQSQHLVTAPTTQATPFYQAPPQCYPVQQFSGNSFTYQQILPNSGMNSSIAPVTMLMPPNSNPNLMQMIYNPFLMQQQQQQQQQQQQQQQVQLVNSPNNVPLQQAPLQRNVYSNPNGNPDSRQVLQSSDPVPVQINTPVSDHFAKAQPRCHANTPVKGVITALPAQTQNYSFLPSKVRPLRPATCHAEMQAPPTTVSTVPISNEHSTAGSSKLPILKFTHDMATAKPVVNRSNKIQIVHILPSTGNPNVQSPRLNHIVMPKIEATTHWPTSEEVKATQTSNNRPQNLITELRDLIANKSIELTPLRSRPVTPDNDNSVMILPSSSVDAKDEKPRSSKIGSVNKRKRSLSSSISNTMKRSTPPNMRQECMDIELSRIDLTDLAEKDYYASQPGGSREQELEMGLTSMEREHELIYDEESQDYPTDISCASEQKSISPGLEVRRDSINEDDYVNLDSKTNIELLSAGQEYDQSLSPASDHKSGRTSPALSYESRTESGSPGLRIRTDLSNKSVHAFPTDSLSRSREEMINDFLEDSNVAANFVDIVPSNLRIQLPPISATDNDEYITSDCGCPNNDAEVNNENGMPSPVAASSPQSRFSNGNDESGNGTETTRYESGSPINIIEIDGIHIMVPSQFYEKPSIGGSQDDIEMVTSELELEKVEPSAEANAEPELDCKGDVIRDARNLAIRSDDMNVSTSYDLLARESWGESDGSDNEGNGDCNISAIDHSWEDIVESRPIVEKRIGRGRLSKIHKCAVCSMTFNCPKELRVHRSTHVSDKVVASETESVPAETTIVSSEPPAMKDDRVTAVRTRRKVKRVVKKVNGRVLFVKNEAYKFMGVFVEEDGIALEDDVERKADPIVFPGGSEIKTEPAAIKVEKALKCLTCPELFTLRKYLVRHVRLDHSTVDGKHMCDTCQEIFAEEADYNIHLKKHPLECRSCSKNFYRRQNLQLHMKRHLGIKPHVCVVCSKAFITKQKLSEHLNVHSGLAPIKCPLCPLGFRRYSNLIQHKNRFHLKLKKKVKDYVCFCGDIFHSRKKLEWHKEIHERKPKCCTFCSERFVHSASLTRHVRRAHDRRYMPKVGREGENVECSICGHVFLKSSLLVHMRLHSGERPFSCAVCNKHFTTKWNLQQHRWTHTSRSNKPFKCTLCKSAFSRESDFTQHMDSHRNKRQYTCNVCGEQFVRKNNCQRHVKEHEAEKLFACKECGKKFHRNYYLKDHMRVHSGARPFSCHICGKASSTKSNHNKHVKIHHAREPVNTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00242513;
90% Identity: iTF_00242513;
80% Identity: -