Basic Information

Insect: Brachyptera risi
Gene Symbol: -
Assembly: GCA_964007535.1
Location: OZ023338.1:498484-506349[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 22 0.002 0.18 13.4 0.6 1 23 322 345 322 345 0.92

2 22 0.00091 0.081 14.5 0.3 2 23 372 394 371 394 0.94

3 22 0.033 2.9 9.6 0.1 1 23 400 422 400 422 0.96

4 22 0.025 2.2 10.0 0.6 1 23 437 459 437 459 0.98

5 22 0.0016 0.15 13.7 0.9 1 23 512 535 512 535 0.95

6 22 0.03 2.6 9.7 0.0 2 23 540 562 539 562 0.90

7 22 0.012 1.1 10.9 1.6 1 22 590 611 590 611 0.96

8 22 0.0073 0.65 11.7 4.9 1 23 626 649 626 649 0.93

9 22 9.3 8.2e+02 1.9 0.1 2 23 726 748 726 748 0.86

10 22 4.2 3.8e+02 3.0 0.0 2 23 755 777 754 777 0.91

11 22 0.0023 0.2 13.2 3.3 1 23 784 806 784 806 0.97

12 22 0.79 70 5.2 0.0 3 23 841 864 841 864 0.93

13 22 0.0009 0.08 14.5 4.4 1 23 867 890 867 890 0.96

14 22 0.038 3.4 9.4 1.1 2 23 897 919 896 919 0.96

15 22 0.24 21 6.9 0.5 1 20 948 967 948 969 0.91

16 22 0.0085 0.75 11.5 0.7 1 23 990 1013 990 1013 0.97

17 22 0.0046 0.41 12.3 0.0 2 23 1017 1039 1016 1039 0.95

18 22 2.5 2.2e+02 3.7 0.5 2 23 1043 1064 1042 1064 0.93

19 22 0.52 46 5.8 0.0 1 23 1100 1123 1100 1123 0.96

20 22 0.017 1.5 10.5 2.4 1 23 1131 1154 1131 1154 0.97

21 22 0.0081 0.72 11.5 0.2 3 23 1160 1181 1158 1181 0.94

22 22 0.0027 0.24 13.0 0.9 1 23 1251 1274 1251 1274 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	22	0.002	0.18	13.4	0.6	1	23	322	345	322	345	0.92
2	22	0.00091	0.081	14.5	0.3	2	23	372	394	371	394	0.94
3	22	0.033	2.9	9.6	0.1	1	23	400	422	400	422	0.96
4	22	0.025	2.2	10.0	0.6	1	23	437	459	437	459	0.98
5	22	0.0016	0.15	13.7	0.9	1	23	512	535	512	535	0.95
6	22	0.03	2.6	9.7	0.0	2	23	540	562	539	562	0.90
7	22	0.012	1.1	10.9	1.6	1	22	590	611	590	611	0.96
8	22	0.0073	0.65	11.7	4.9	1	23	626	649	626	649	0.93
9	22	9.3	8.2e+02	1.9	0.1	2	23	726	748	726	748	0.86
10	22	4.2	3.8e+02	3.0	0.0	2	23	755	777	754	777	0.91
11	22	0.0023	0.2	13.2	3.3	1	23	784	806	784	806	0.97
12	22	0.79	70	5.2	0.0	3	23	841	864	841	864	0.93
13	22	0.0009	0.08	14.5	4.4	1	23	867	890	867	890	0.96
14	22	0.038	3.4	9.4	1.1	2	23	897	919	896	919	0.96
15	22	0.24	21	6.9	0.5	1	20	948	967	948	969	0.91
16	22	0.0085	0.75	11.5	0.7	1	23	990	1013	990	1013	0.97
17	22	0.0046	0.41	12.3	0.0	2	23	1017	1039	1016	1039	0.95
18	22	2.5	2.2e+02	3.7	0.5	2	23	1043	1064	1042	1064	0.93
19	22	0.52	46	5.8	0.0	1	23	1100	1123	1100	1123	0.96
20	22	0.017	1.5	10.5	2.4	1	23	1131	1154	1131	1154	0.97
21	22	0.0081	0.72	11.5	0.2	3	23	1160	1181	1158	1181	0.94
22	22	0.0027	0.24	13.0	0.9	1	23	1251	1274	1251	1274	0.97

Sequence Information

Coding Sequence: ATGCAGAGTGAAAGTGCTCCCGTGGATCCTGCGGCTCGATGCCGTCTTTGTGCCGCCCACGAAGCAATCAAAGTGGATATTTTTGGGGATGAAGGACGTTCAAGAAACTTGGTGAACAAGATTGAAACATGCCTACCAATCACAGTGGAGTGCGAGGATCGGTTGCCCAAGTTTCTGTGCTACCGCTGCATGTACCTGCTGGAGAAGTTCTACAACTTCCGCATCAGCTGCGTGACCGCGGCAGAGCTGCTGCGGGTCTGCGTGGACGAGCACGAGTCTCGCGCGATCCCGGGAGGTGAGAGCCACCGCTACGAGGACCTAGAGCAACAGCTGTGCTCCATGAAGAAGGAGGTGCAGCATGACGTCATGCCCACCCTGGAAATACAGGTGGCGTCGAGTCCCAAGCCCGCGCCGGTCCCGGGTCCCCCAAGTCCCGACGTCCAAGAGGTCGCTCCCGTCATCGACCTCGAAGCGCCCAAGTCCTCGCCGGCCCAATCAAAACGCCCGAAAACCAAGAGCCCGACGAAACTTATCCATTCGAAAACCCTGTCGAGACTTTCCCTGCAGTCTAGGAGCGTGCTAAAGCCCTCCGTGACAAACAAGCCCGGTCAATCGAAGAGCAGCCCCAGAATTCCTCACAGGATCGTTCAATCTGAGCGGACGATGATCCGTGCCAACCAATCAAACGCTTCCGGCGACAAAGACGTCATCGACCTGACGGACGAGCCGGGGCCGAGCCGCGTCGGGCGGACCAACGGCGAGCTGCTGAAAGAGACGCTGCTCCAGGTCAGGCGCAGGCGTTCAGGATCCGTCGAGATCGAGGAGGTGGGCGGACGCAAGCGCGTGTCGAGCACCAAGGCCGTGGAGAACGTGGTCAACATGCTGAATGACGAGGCGGGCGGCTCGAGCCGACGGAAGAACGCACGGCCGCGCAAGATCGCGCAGCCGGACGAGGCCCGCCCGTACGCGTGCATGCTCTGCGACAAGAGCTTCTCGCTGAAGAACGCTCTGAGCCGCCACTTCAACGCCAGCCACGGCGTGGAGATGGCCGACGTGAGCGTCTCGTCGCCGCGGCAACCCGTCGAAGTAGTGGACCTGGACTCGTCGACGCTGCGCTGCGAGATCTGCACGCGATCGTTCAACGACCGGCCCAGCCTGTGGCTCCACCTGTTGTACACGCACAAGGAGGCGGCGCCCTACGCGTGCGGGCTGTGCCTGAAGCTGTTCCCCGACAACACCGCGCTGTCTCGGCACTGGAAGGGCCACTACGCCACGGGCCAGGCTGACACCTTCTCTCTAGACCGCCGATACTCCTGCGAGATCTGCGGGCGGCAAGACAACTCGCGCAAGAAGCTCGTCAAGCACTTGAAGGTGCACATCTTCGACGGCGGCCTCGACCCGGACATGTTGATCATCGTCAACTCGGACTGCTACGACGCGGTCGGTCGCAGTTTCGATTTCGGCGATTTCGACGTGTCCCAAGACGCCAGCTTCACCAGCTCGATGATCGTCGGCGACGACGTGATGCCCTACCACCCGTGCAACCTTTGCTTCAAGGCGTTCGAGACGGAAGAAACCCTCGCAAAACACCGTAAACTCGTCCACAAAGTCGTGATAACGTGCGAGGTCTGCCAAGAAGTATTCGACTCGGAAGAACGGCTGATGCGTCACGTAACGGCCGAACATTTCGACGGCAACCACATGCTGGCCGACCAGCCGTTCAACCCGTTCGAGCCTCTCGTAGACTTCTCGTCCGGCGTCGACCTGTACTACTGCAAGTACTGCTCGCACGAGTTCACCACGATGGAGGCGGTGTCGCGACACCAGCGCTCGTGCAAGTCCGCCGGGCCCAAGAAGCTCGACCTCTCCTGCTCGCACCACTGCGAGATCTGCAAGAAGTCGTTCGTGTCCGAAGACTGCCTCGTAAAACACAAGAAGGGCGCTCACAAGGAGAGCGCAGAAGACCCGGACGTCGGTTACAACGCGTTCTACTTCTGCGAGCTGTGCGGTAGCTCTCACGCGACCAAGGTCGGCCGGTGGCGACACGTCATATCCAGCCACGCGGACGAGCCGTCGATACGGTGCGACTACGAGTCTTGCGGGAAGATATTCGTCGCCGAGTCGCTCTGCCTGGAACACAGGTCGCACCACCAACTACAGGGCAAGACGCCGAACACGTGCGAGCTGTGCGGCAAGCTGTGGAACTCGACCGTGGAGTTCTGGAAGCACGTGCAAGGCGTCCATGCGGAGATGTTGCCGCTAATCTGCGGGATCTGCCTGAAGATGTTCGGCGAGGTGGAGAGCCTGGTTTATCACGTCGGTACGACTCACAAGCTCGACGAGGGCAGTTTCCACTGCTCCACCTGCGCCAGGAAGTATTCCAACCAATCGAAACTCTCGCGCCACCAAGCGATACACTCGGCCGTTGCCAAAAAATCCAAGGTGGTTCTTAAAACGCCGCCGGCGAAACGTCCCGTCGTCGTCAAGAAACCAACCGACGGAGAATCGAACGTTCTTTGGTGCGACGTCTGCCCGGACGTGGAGAACTTCTCCGACGCGGCCGCCCTGGCGGAGCACCGGCGCTCCGTACACTCCCTCCACCCGTGCGACTTCTGCGACAAGTTCTACGGCCGGAACTCTCACCTGTGGAAACACGTCAACAAGAAGCACCGCGGACACCCGGAGATCACGTGCACCATCTGCCAGAAGGTCTCGGCCACCAAGACACAGCTGTTCTTCCACTACCGGAAGATCCACAAGTCCGAGATGGGAGTCCAGGACGAGCACATCCTGACGATACCGACGTTCCTGCCGGGTCAGAGGTCGAGGCAGTACGCGACGCACGACTGTCGCAGCTGCGGGAAGACGTTCTTGAAGCGCGCGATGTTGTCCAAGCACCAGGCGGTGTGCTTGAAGCGAGCGCGGCAGAGGAAGAGGGCGGGGGCGGGCGTGGGGGCGGCGCAGAGGCACGAGTGCGACAAGTGCGGGCTGAGCGTGGAGACGAGGGGAAGGCTGACCGATCACAAGCGCAGCGCACACAAGTCGAGCCCGTGCGAAAACTGCGACGAGACCTTCCCCACCCTCCCCTCCCTCCTCGACCACCTCCTCTCCGCCCACCCCTCCCTCCGCTGCCTTACCTGCTCCGCCCTGACGCGCTCCCCCTCCGACCTGGCCACCCACACCGCCCACCACGCCaccaccccccaccccccctacTGCCGCGCCTGCGCCTGCGTCCTGCCCACCATCACGCGCGCCTGGCACCACCTCAACGCCCACCACAAGCCCGACGTGCCCTTCACGTGCGGCGTGTGCCTAGAGCGCCTGCCGGACACCGCGGCGCTCCAGGCGCACGCCCGGGAGAACCACCCGGAGGCTGTGGAGGCCGACCACACGTGCAGGATATGCGCCAAGACGTACAGCACTAACTACAAGGTGGCGGAGCACGTTAGGAAGTACCACGCGGGATACGACGCGTGCAGAGAGTGCCTGGCGTGCTTCTCTGACGCCGCCCAGCTAGAACGCCACGCACGGGACGTCCACGGGAACAACTCTGACGACGAGACGGTGACGGAGAAGGTGAACGCCGAAGAAGACGGCGATGATGATAAGGTAACGAAAGCGAAAGAGGTGGATGAAGACGGCGATAAAGAGAAGGTAATAGTGAAAGCGAAAGAGGTGGATAAAGTAACGGTGAAAGCAAAAGACGCGGAGAAAGACAAGGTGGCGATGCAGCGCGCGAAGCGGAGCTACTCGTGCTACAAGTGCCCGATGACGTTCGGAAAGCCGTCGGAGCTGAGCGGGCACAAGCGTCGGCGCCACGGATCCACGGGCCTGGCCTCGGTCAAGTCGGAGCCCGGTTCCGAGGAGGACATGCCGGTGTTAGAGCCGAACGCGCCCGTCGACCCGTGTAAGTCTCCTGGGCCGCCCGCCGACCTCAGCATGCCCACCCTGAGCGAGGCGGCCCTGGATCCGGCGGATCTACACCAGGACAGTTCTGAGCCAACGGTTACGGACGAGACCGAAGATGTGGCGACGGAAGCCTCGGTATCGGCTGGCGTGTGCGCGACAGACAGGTGTGCGGACGCGGAGGTTTTGTCGAAGGTCGAGGACGGAGGTGCGAGGGGGGAGGATACAATCATGGATACGGACGCGGATGTGAATACTGACAAAGTTCCTATGAAGAGCGAGGTGTCGGAACCTCCGGCTGACGTGTGTGCAACAGATAGGTGTGTGGACGCGGAAGTCGCGGACAGAGGTGCGAGGGGGGAAAATACGGACGTGGATGTGAATACTGACAAAGTTCCTATGAAGAGCGAGGTGTTGGGAACGACGGCCGGGAGTCCGGTTAAAGTGGCGGCGAAGTCCGGACACTTCCTGGAGTCTCTGGAAGACGCCCTGGACATCCTGGAAGCTCAGAACAGCTAG
Protein Sequence: MQSESAPVDPAARCRLCAAHEAIKVDIFGDEGRSRNLVNKIETCLPITVECEDRLPKFLCYRCMYLLEKFYNFRISCVTAAELLRVCVDEHESRAIPGGESHRYEDLEQQLCSMKKEVQHDVMPTLEIQVASSPKPAPVPGPPSPDVQEVAPVIDLEAPKSSPAQSKRPKTKSPTKLIHSKTLSRLSLQSRSVLKPSVTNKPGQSKSSPRIPHRIVQSERTMIRANQSNASGDKDVIDLTDEPGPSRVGRTNGELLKETLLQVRRRRSGSVEIEEVGGRKRVSSTKAVENVVNMLNDEAGGSSRRKNARPRKIAQPDEARPYACMLCDKSFSLKNALSRHFNASHGVEMADVSVSSPRQPVEVVDLDSSTLRCEICTRSFNDRPSLWLHLLYTHKEAAPYACGLCLKLFPDNTALSRHWKGHYATGQADTFSLDRRYSCEICGRQDNSRKKLVKHLKVHIFDGGLDPDMLIIVNSDCYDAVGRSFDFGDFDVSQDASFTSSMIVGDDVMPYHPCNLCFKAFETEETLAKHRKLVHKVVITCEVCQEVFDSEERLMRHVTAEHFDGNHMLADQPFNPFEPLVDFSSGVDLYYCKYCSHEFTTMEAVSRHQRSCKSAGPKKLDLSCSHHCEICKKSFVSEDCLVKHKKGAHKESAEDPDVGYNAFYFCELCGSSHATKVGRWRHVISSHADEPSIRCDYESCGKIFVAESLCLEHRSHHQLQGKTPNTCELCGKLWNSTVEFWKHVQGVHAEMLPLICGICLKMFGEVESLVYHVGTTHKLDEGSFHCSTCARKYSNQSKLSRHQAIHSAVAKKSKVVLKTPPAKRPVVVKKPTDGESNVLWCDVCPDVENFSDAAALAEHRRSVHSLHPCDFCDKFYGRNSHLWKHVNKKHRGHPEITCTICQKVSATKTQLFFHYRKIHKSEMGVQDEHILTIPTFLPGQRSRQYATHDCRSCGKTFLKRAMLSKHQAVCLKRARQRKRAGAGVGAAQRHECDKCGLSVETRGRLTDHKRSAHKSSPCENCDETFPTLPSLLDHLLSAHPSLRCLTCSALTRSPSDLATHTAHHATTPHPPYCRACACVLPTITRAWHHLNAHHKPDVPFTCGVCLERLPDTAALQAHARENHPEAVEADHTCRICAKTYSTNYKVAEHVRKYHAGYDACRECLACFSDAAQLERHARDVHGNNSDDETVTEKVNAEEDGDDDKVTKAKEVDEDGDKEKVIVKAKEVDKVTVKAKDAEKDKVAMQRAKRSYSCYKCPMTFGKPSELSGHKRRRHGSTGLASVKSEPGSEEDMPVLEPNAPVDPCKSPGPPADLSMPTLSEAALDPADLHQDSSEPTVTDETEDVATEASVSAGVCATDRCADAEVLSKVEDGGARGEDTIMDTDADVNTDKVPMKSEVSEPPADVCATDRCVDAEVADRGARGENTDVDVNTDKVPMKSEVLGTTAGSPVKVAAKSGHFLESLEDALDILEAQNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -