Bris022917.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachyptera risi
Gene Symbol
ZNF236
Assembly
GCA_964007535.1
Location
OZ023332.1:42735520-42761457[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 9.6e-06 0.00085 20.7 1.0 1 23 224 246 224 246 0.98
2 28 0.00099 0.088 14.4 0.4 1 23 252 274 252 274 0.97
3 28 5.6e-05 0.005 18.3 0.4 2 23 280 301 280 301 0.97
4 28 0.2 18 7.1 1.3 3 23 309 329 307 329 0.95
5 28 0.13 12 7.7 4.1 1 23 340 362 340 362 0.97
6 28 0.0056 0.49 12.0 7.9 1 23 386 408 386 408 0.98
7 28 5.3e-05 0.0047 18.4 1.4 3 23 416 436 414 436 0.97
8 28 9.3e-06 0.00083 20.8 0.1 1 23 442 465 442 465 0.97
9 28 0.0003 0.027 16.0 1.4 1 23 475 498 475 498 0.97
10 28 3e-05 0.0026 19.2 0.4 2 23 604 625 603 625 0.97
11 28 5.8e-06 0.00051 21.4 3.6 1 23 631 653 631 653 0.99
12 28 9.3e-06 0.00082 20.8 0.6 1 23 659 681 659 681 0.98
13 28 0.0055 0.49 12.0 0.6 1 23 687 710 687 710 0.96
14 28 0.00053 0.047 15.2 3.2 1 23 769 791 769 791 0.98
15 28 0.063 5.6 8.7 1.9 1 23 797 819 797 819 0.98
16 28 0.0005 0.044 15.3 0.6 1 23 825 847 825 847 0.98
17 28 5.8e-05 0.0051 18.3 5.1 1 23 853 875 853 875 0.96
18 28 5.1e-05 0.0045 18.4 3.5 1 23 1116 1138 1116 1138 0.98
19 28 0.0027 0.24 13.0 1.7 1 23 1144 1166 1144 1166 0.98
20 28 2.6e-05 0.0023 19.3 0.7 1 23 1173 1195 1173 1195 0.98
21 28 0.0019 0.17 13.5 0.1 1 23 1201 1223 1201 1223 0.97
22 28 1.5e-07 1.3e-05 26.4 1.4 1 23 1304 1326 1304 1326 0.98
23 28 0.0035 0.31 12.7 2.8 1 23 1332 1356 1332 1356 0.96
24 28 2.1e-05 0.0018 19.7 4.6 1 23 1362 1384 1362 1384 0.98
25 28 5.9e-05 0.0052 18.2 1.8 1 23 1390 1412 1390 1412 0.99
26 28 3.3e-05 0.0029 19.0 2.4 1 23 1615 1637 1615 1637 0.96
27 28 3.9e-05 0.0035 18.8 1.6 1 23 1643 1665 1643 1665 0.98
28 28 0.00026 0.023 16.2 1.3 1 23 1671 1694 1671 1694 0.98

Sequence Information

Coding Sequence
ATGGAGACTTCTGCTGGCGGAGAAGTAGTGGATGCTCCACACCTATCCTCGCTGTCAGCAGACTCGGTATTATCTACATCCGATGGAGGATTTATGTTCTCTTTGGATGGTAGTACTGGTCTCTCTACATCAGATGACGGAACAACGACATATGTCACGTTACCTCTCCACTTATTGCAAGACCACCAGTCGATGCTGGACGGAGGCTCGATCTCGTTGTACCTAGACTCCAACCAGATCTCTTTTCTGAACGAAGTCGAGGGTGGACAACTTCAGCTCAACTCCTCGGCCATATCAGAACAAGTCAACAATCAGTTGGAGCTCCATAACACTGCCGAAGAAACCAGTGAAGATGTGAATGACAACACCACAGTCGTTCGTAGCCTCGAATTGTCGTCGTTGGATTTTGCCCAGCTGCAAGACGGTGACCATGTTCTCAGTATTCAGGATGCTCAGACTATAATCGACCCATCTAGTGGCTTGTCGTTCTACGTAGAGGGTCCCGCGCGGCAGCGTCACCAGTCTAAAACACTCAACATACCGGCTAGTCCGCTGACAGAAGCGCAAACAAACTTGGCAACGGTACAAACGAATGTGCAAAAAAGAGGTCCCGGTAGGCCGAGAAAAGATGATGCTGAAGTTGTTGATCCTCCTATTGGAAAGGGCCCGTACAAGTGCGAACAATGCACCAAGGAGTTTGCAGTCTGGTCGCAGCTCAAGAAACACGTCAAGAATCACTCGAACGATAAGCCTCATCGGTGTACGCAATGTCCGATGACATATAACGTCGAGTCCAACCTAGTGCTGCACATGGCTATCCACAACACGGGGGACCCGCGCTGCCCCGAGTGCAAGAAGAAGTTCTCGCGGGTGGCCAGCCTGAAGGCCCACGTGATGCTCCACGAGCGCGAGGAGAGCCTCTTCTGCTCCGAGTGCGGAGACGAATTCGGCACGCAGCATCAGCTCGACACGCACAAGAAGGAGCACGAACAGGAGTGGGTGAAGAACGTCCGGATCCACCAGTGCCGTCAGTGCCTGAGGCAGTTCCAGAAGGCGTCGTCGTACCGCGACCACATGAAGGAGCACAAGCGCGTCAAGGCGTCGCTCGCCATACAGCGCTACCACAAGCGCAACATCGACCGCAGCGCCTTCATACACAAGTGCGCCTCGTGCCACAAGTGCTTTCAGAAGCCCAGTCAGTTGGTACGCCACAAGAGGATTCACACCGGCGAGCGCCCGTACGGCTGCCAACAGTGCAGCAAGAAGTTCAGCCAGAAGGGCTCGCTGCAGATACACATGTCGAAGCACACGGGCGAGAAGCGTTTCACGTGCGAGTTCTGCCCCGCGTCGTTCAGCCAGAAGGGCAACCTGCGCGCGCACATCGCCCGCGTTCACGCGATACCCGACGCGGGGGAGGAGGTGTTCAGCTGCACCGACTGCCCGTGCGTGTTCAAGAAGCTCGGCAGCCTCAACTCGCACATCAGCCGCGTGCACTGCGGCGAGGTGGAGCAGCAGCGGCCGGGACATCCCAACGACATGATGAACCTCAACGTGAACGTTGCCCTGGCCGAACTGCGCGCGTTGGAGAAAGTACAGTCACTGCCAGCGAAGCCTCAAGACCCTGAAGACATCCTCCAACAAGCTCTGTCCAACAGCGGGCTGGGCGGCAAGAAGGCGAGGCCCGACAAAACCGACCAATCCAAGTCCCCGTGCGTCAGCGGTGTCATCATGCTCTCCGACCAGGGCTTCGACGGCATCGCCCGCCGCTACAACATCCGCACGCGCACCGTCGGCAAGGTGCGCTGGCTCGAGTGCCCGTTCTGCTCCAAGGAGTTCAAGAAACCATCAGACGTCGTCCGCCACCTGCGCACGCACACGCACGAACGTCCATACAAGTGCACGCACTGCTACCGCTCCTTCGCCGTCAAGTCAACGTTGACGGCTCACCTCCGCACGCACACGGGCGTCAAGAACTACGAGTGCAAGGCGTGCGACAAAATGTTCTCGTCGGCCAGCTCGTTGACGGTACACAAGCGTCTGCACACGGGGTCGCGACCCTTCCCGTGCGGCGTGTGCGTGAGGACGTTCCGCACGTCCGGGCACAGACAGTCGCACGTGGCCACGGAGCACATGGGCGGCGGCAAGAGGTCGGCGAGGTCGCTGCTGAAGACGATGAAGGCGCGGAACGTGAAGGTGAACGTCGAGCTGGAAGAGCCGCTGCTGATTACGGACACGGGGCTGGTCAAGGTCGCGAAGAAGGTGAAGACGTTCTTGCCGGGCGACGCGGTCAGCTTAGAACGGCCGTACAAGTGTCTGGTGTGTTCGCTGGCGTTCAGGAAGTCGAGTCACTTGTTGCAGCACACTCGGCAGCACACGGGTGAACGGCCGTACCGCTGCCCGACGTGCGCCAAGTGCTTCCTGACGAACGGCATCCTGAAGAACCACGTTCGGTCGCACGAGGGCGTCAAGCCGTACAAGTGCGACGTGTGCTCGGACCTGTTCTCGACCAACGGCAGCCTGAAGCGGCACATGGCGCGCCACACTAACCTGCGCCCGTACCTCTGCCCGTACTGCCACAAGACCTTCAAGTCCACCGTCAACACGCGCAAGCACATGAAGACCCACATACACGAGATAGCCTCCAGGCAGGAGCTGGAGAGGGGGGAGCAGCAGGAGAGCGTCACGACGACGTACCAGACGCCCGACTTTGCCCAGGCGTTCTCCGACCAGGCGTTCGATACGGAGGGGGGCGACCTTGACGTGGTGTCGCACCAGACGTACGACCGGCACGACCTCGTGACAGTGGACGACCTGCAGCACGAGGCAGCTACCAACCCGACGGTGATAACCCACACGCTGCACGCGGACGCGTCAGGCATCATCACTCTGCCGCATCACGTCGAGAACGCGCTCACGCAGGAGAACATACAGGAGATCGAGCGCACGCTCAACGAGCAGATATTCGGACATAGCGGCGACCAAGACGCAGACGATGATGCTGCGGAGCGAGACAGCGACCTGGAGTCGACGACCACGGAGGATCTGACGCGGACGTTGACCTCCGACCCGACCGAGCAGACGACCTCCGACCAGATCCTCGAGACGAAGCCCGACCAGGCCGCGAGCAACTTGTACGAGACTCTCGAGTTTGACTTCACCGGCATGACGATGCAGGTCGAGGAAGAGAACCTGGATGTGTCCCTGGACGAGCCCGGACTGGCCGCCAGTATGGCCAACCTGCTGGCCTCGCAGGACCCGCAGGACTTCGAGGGCCAGACGGACATCATCCTGGTGGCCGAGGACCAGGAGAGGGTGACCGGCACGGTCGGCGCTCAGTCCAGGCCCTTTGTGTGTCCGCGGTGCTTGCGCGCGTTCAAGAAGTCTAGCCACCTCAAGTCTCACCAGCAGACGCACTACAAGGAGAAGTTCTACCACTGCAAGCAGTGCAAGAAGGAGATGTCAAGCGTCAGTGCCTTACGAGCCCACATGAAGATCCACACGCGCGTGACCAAGGAGTTCCAGTGCCAGGTGTGCGACTGCGCGTTCACGACCAACGGCTCTCTCGTGCGTCACCTGGAGGTCCACAGCACGCGCCGCCCCTTCAAGTGCATCATCTGCCCCGCCGTCTTCAGGACCGCCCTCGACCTGCGCAAGcacatcaagCTGCATGCGCCGCGTGAGAAGGAGGGTCGCGTGATCGCCAAGGAGGCGGTGCCGTCGATCCGGGGGCGGCGGAGGGCGGCCATCATTCGGCTGACCGCAGAGCAGACGGAGACGTTGGCCAAGCAGTCGGTCCAGGAGGCTAGTTGCGTCTCGGAGGAGGTCCTCATCAAGTCGGCGGCCGAGGCCAACAGAGTCAGCGAGATCGTGGAGCCCAGCAAGCAGTACAAGATGGAGCCGCTACACCCGCACGTGTGCAAGTACTGCCCGAAGAGTTTCCGCAAGCCGTCGGACCTGGTCCGCCACATCCGTATCCACACGGGCGAGCGGCCGTACCGCTGCAGCTACGGCGCGTGCAACAAGTGCTTCACGGTCAAGTCGACGCTTGACAGCCACGTGAAGACGCACTCAGGCGACAAGTGTTTCACCTGCCACGTCTGCAGCTGCGTATTCTCCACCAAGGGCAGTCTTAAAGTTCACATGCGCCTCCACACTGGCGCTAAGCCGTTCAAATGCCCGGTCTGCGTTCAGACGTTCCGCACTTCGGGCCACCGCAAGGCGCACATGATGATGCACATCCGAGAGGCGAAGAAGCGAGAAGACATGTCCGCTCGTGGCGTCAACAGACAGAAGATCAAAGAACAGCCGCCCGAGATCCCGGAACCGTCCGAGTCGGACGTGTACGTCGAGGACATGGAGTCGTACCACGACGGCTACGGCGTGTCGGGCATGACGGAGATCAACCCGGGCAACTTCCACCTGCAGTTGCCGGGCGGGGATCAGCACGCGGGCAGCGCGCACTCGATGCAGATCGACGACGCACTCTTCCAGCAGCTGCAGGCGTCCAACATCATCGTGCAGAGCTCGGCCAACGACGGCAACGGGATGAACGTGTTCAACACGGGCGATTTGAACGGGAACGTACGGTTCGAGATACACACGGACGAGCACGGGCAGATCATCAACATACAGCCGATGCAGGACGACGGCGGGATGAATATGTTCGATCTGAGCGAGGATCTGGAAGCACCCGAGGAGGAGGTCAAGCCGGGGTCGCGCTACCTGGTGACGGACAGCCGCAAGTCGGGACGGTCGCTCGTGGCGATTGGCAACGCGGCGACAGCCAAGAAGAAGAGGAAGCGGAAGAGGTCGATGGACGCAGACGACGACTTCCTCGTGTTCCACGACTGTTCCACGTGCAAGAAACGGTTCGACAAGCCCAGTCAGCTGGAACGCCACGTTCGCGTCCACACGGGGGAACGCCCGTTCGTCTGCACGATCTGCGAAAAGTCGTTCAATCAGAAGAACTCGCTGGCGACTCACTTCAAGAGCCATTCCGGGGACAAGCCGTTCCAGTGCATGATCTGCACGTACTCGTCGACGCAGCGCGGGAACCTGAAGACGCACCTGAAGCGCGCGCACCAGATCGACCCCCTCGACGCGTTCATCGCGCCCCACGTCGCCTTCAAGCCGTCGCACCTCGACCTCGACATGGTCACCGAGCTCTTCCCGCAGATACACAACGCTGACGACTCATAG
Protein Sequence
METSAGGEVVDAPHLSSLSADSVLSTSDGGFMFSLDGSTGLSTSDDGTTTYVTLPLHLLQDHQSMLDGGSISLYLDSNQISFLNEVEGGQLQLNSSAISEQVNNQLELHNTAEETSEDVNDNTTVVRSLELSSLDFAQLQDGDHVLSIQDAQTIIDPSSGLSFYVEGPARQRHQSKTLNIPASPLTEAQTNLATVQTNVQKRGPGRPRKDDAEVVDPPIGKGPYKCEQCTKEFAVWSQLKKHVKNHSNDKPHRCTQCPMTYNVESNLVLHMAIHNTGDPRCPECKKKFSRVASLKAHVMLHEREESLFCSECGDEFGTQHQLDTHKKEHEQEWVKNVRIHQCRQCLRQFQKASSYRDHMKEHKRVKASLAIQRYHKRNIDRSAFIHKCASCHKCFQKPSQLVRHKRIHTGERPYGCQQCSKKFSQKGSLQIHMSKHTGEKRFTCEFCPASFSQKGNLRAHIARVHAIPDAGEEVFSCTDCPCVFKKLGSLNSHISRVHCGEVEQQRPGHPNDMMNLNVNVALAELRALEKVQSLPAKPQDPEDILQQALSNSGLGGKKARPDKTDQSKSPCVSGVIMLSDQGFDGIARRYNIRTRTVGKVRWLECPFCSKEFKKPSDVVRHLRTHTHERPYKCTHCYRSFAVKSTLTAHLRTHTGVKNYECKACDKMFSSASSLTVHKRLHTGSRPFPCGVCVRTFRTSGHRQSHVATEHMGGGKRSARSLLKTMKARNVKVNVELEEPLLITDTGLVKVAKKVKTFLPGDAVSLERPYKCLVCSLAFRKSSHLLQHTRQHTGERPYRCPTCAKCFLTNGILKNHVRSHEGVKPYKCDVCSDLFSTNGSLKRHMARHTNLRPYLCPYCHKTFKSTVNTRKHMKTHIHEIASRQELERGEQQESVTTTYQTPDFAQAFSDQAFDTEGGDLDVVSHQTYDRHDLVTVDDLQHEAATNPTVITHTLHADASGIITLPHHVENALTQENIQEIERTLNEQIFGHSGDQDADDDAAERDSDLESTTTEDLTRTLTSDPTEQTTSDQILETKPDQAASNLYETLEFDFTGMTMQVEEENLDVSLDEPGLAASMANLLASQDPQDFEGQTDIILVAEDQERVTGTVGAQSRPFVCPRCLRAFKKSSHLKSHQQTHYKEKFYHCKQCKKEMSSVSALRAHMKIHTRVTKEFQCQVCDCAFTTNGSLVRHLEVHSTRRPFKCIICPAVFRTALDLRKHIKLHAPREKEGRVIAKEAVPSIRGRRRAAIIRLTAEQTETLAKQSVQEASCVSEEVLIKSAAEANRVSEIVEPSKQYKMEPLHPHVCKYCPKSFRKPSDLVRHIRIHTGERPYRCSYGACNKCFTVKSTLDSHVKTHSGDKCFTCHVCSCVFSTKGSLKVHMRLHTGAKPFKCPVCVQTFRTSGHRKAHMMMHIREAKKREDMSARGVNRQKIKEQPPEIPEPSESDVYVEDMESYHDGYGVSGMTEINPGNFHLQLPGGDQHAGSAHSMQIDDALFQQLQASNIIVQSSANDGNGMNVFNTGDLNGNVRFEIHTDEHGQIINIQPMQDDGGMNMFDLSEDLEAPEEEVKPGSRYLVTDSRKSGRSLVAIGNAATAKKKRKRKRSMDADDDFLVFHDCSTCKKRFDKPSQLERHVRVHTGERPFVCTICEKSFNQKNSLATHFKSHSGDKPFQCMICTYSSTQRGNLKTHLKRAHQIDPLDAFIAPHVAFKPSHLDLDMVTELFPQIHNADDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00242431;
90% Identity
-
80% Identity
-