Bris031673.1
Basic Information
- Insect
- Brachyptera risi
- Gene Symbol
- SNAPC4
- Assembly
- GCA_964007535.1
- Location
- OZ023336.1:26418634-26426999[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.041 84 4.5 0.0 20 42 318 343 303 347 0.82 2 5 2.9e-10 6.1e-07 30.5 0.1 3 44 355 398 354 400 0.95 3 5 4e-05 0.083 14.1 0.4 3 45 408 454 408 455 0.88 4 5 8.8e-10 1.8e-06 29.0 0.0 1 45 460 506 460 507 0.94 5 5 1.7e-14 3.5e-11 44.1 1.7 2 45 513 556 512 557 0.96
Sequence Information
- Coding Sequence
- ATGTCACAAAACGATAATATTCAAGTAGGCCTCGGACTACAGCCTACACCAGTTCAAGTGACAAGTGGGATTTATAGTGGTGAGGTTATTAAACGTAGAAATGAAGTACTAGCAAAATACCAGGCTCAAGTGGACaatgtatatgaatattatgattACCAGCAGATTGATGATGGGGATGATGAATCTTGTTCCGATTTCTCTGATGCCAACTGCAGCGAAGACATTTCAGATTTTGAGCCAAACATGCCTAAATCTCAGGAAGAGGAAACTGAAAATTACAAAGAAGATGTTGACAAGATCGAGAGGTTTCTTGCTCAAGATGAACCTGGAGAAGAGTTCTTAGCCAAGAATCGATCAAACCGAGCAGTTAGGTCTAGTAGTAGAATAAATAAAGGCAGTAGTAAGCCTACCACTAGTGAAACAGTGACTGAGAAGTGTTTAGCTTCCAATAAAAAAACCTTACAATGTGTACTGAAGATGGAAGAAGACTTGAAAATGAAGTTAGAAAAGGTTAGAGATCAATATGACGAAGTTACTCGACGAATCAACCACTGTCTTACTTATAAAGATAAGTGCAATCGTGGGTCtttatttacatatttaacTCGATTAGGCATTCCGTATTTCAAAGACCGACAGTTTTTCCACTGTCCTGGTAATGATGATTTCAAGGAAAAGGCTAAAactgaatatattaaaaatcaTTTTGTCCAGGATGTCACCTGGACAAAAAAGCATTGTTGGAAAATAAGTGAAGCTATTAGAGAGTGGGAGATTGAAGGTCTGAAAATAGAGAGTAAAAAGGAAATAGAAGCACTCGCTCGGTTATTAAAAGCAACTGACGATCGCGAAGAAGTTGACCACTTGACTAAGAAAATAAGAGCCattgaaaaacaaagttttGATGATTTAACATTAGCCGATGTGGCAGGAAAGCGTGGGCCCGAGGGAAAATATGATTGGTTGAAAATTTCAGCTCAAGATTTAAATGGTGATAAAACTGCAGACGAATGCAAGGCATTGTGGGATCATTATATTAATCCAAATGTAAACGTAGATGATTGGACAGCTGAGGAAGAAGTAAAATTAAAAGATATTGCTGGACATTACAAGCAACAAAATTGGGAAGCCATAGCGATGGAACTTGGCACTAATAGAACTGCATACCTTTGCGTCTCTAGATTCCGAAGTGAGTTACACGACGAGGATACGAACATACGTTTCACCAAAGAGGAAGATGATGCATTAAGACACCAGATAGAGACTACTCGTTTTGGTACTTATATTTGTTGGTCGAAATTAGAATTCTTGATGAAGGGACGAAATAAGAATCAATTATTAAGTCGTTGGTTAAAATTGCAGCCAAATCGCCAAAAAGGTAAATTTACAGATCATGAGGATCTGTTGATCCTAAACGGTGTCCGCGAATTGGGtaacaataatttcaaacaaGTCACTAGAACTTATTTACCGCATCGATTTCCAGCTCATGTTCGTAATCGCTACTTGACGCTAATACACAACTGTACCTCTGGAATGTGGGAAAAGGAGGAAGATAAACTGATTGTTAATCTTGTGAGCCAGTGGGGAAAGAACTGGAGGAAAATAAATGAGTTCTTTCATAACAGAACTAGATCCCAACTTCGACAACGCTACAATAGTATAAAAAAGCATTTACTACGACAACCAAATTGTGATGGAAGCAATAACGACATGACAGACGTACAAGTACCTACTAGGAGAACTATGAAACATATTGTACATGAAAGAGCCAAGAATAAAAAGCTTATTAAAAGGTGCGccaaaatgacaaaaaaagaattgaatttAGCTCTGATGAAAAAGAAACTTGGGAGAAGAAATAACAAAAGGTCAAAGAACGGTTTACTGGATCATAGGTATAATGAGTTTTTCAACGTAGGTTTAGTATATCCGCAGAAACCCGGCCGAGTAAACCGAGAATGTCCCTTCGAAGAAGATGTACAAGAGCACACTCGGGCGTTGAGGTCCTTGTTTACTCTCTTCTCCGTCAACTTGAACATTCCTAACGACGACGTTGTAATGGAAGGTGATTTTCTCAGCTTGGTAATGAAAAACAGTTTGATATCTCTACGAGATCATAAGTGCGACAACCCAGTACCGAAACCTCCAACAAAAAAAGTAGTTACGAAGAAATCTACAGTGCCTGTTCCAGTAGCGATACCTGAAGTTACAGTTGAAGAAATTTCAACTGCTGATATCGACCTACCTTCACATAGCCCAAACAACATTGACAAAGTTACTTTTCGTGAAGATGGTCTAAATAAAAGTACCGGTATATCTCAATCCCCCTTTTCATACACTGCTGACGGGTATGTGAAGAAATGCTCTGAGAAATTATTAATCCCCGTCAAAAAAGTTGTGTCAAAACAACAGAGTGTTTTAGCTAAAAAGAAAAAGTGCATTGTAAAACCATCTCCAAAATTACTTCCTCCACACAGCTCGACACAACTCAATTCAAACGTGAACAATCGAAAAAAGTCACACCCCAACAAAACCCCAAAACCAACGCCAACAATAGGTGGTAGTTCAGGCGTTCCGTTTAATCCATTTTGGGCAGTCGGGAGCATTTTCTGGGATCCCGATATTTTCTGGGCTTCGATGCCATCGCCGCCGGCAAAGGTTGTTGTTGCGCCGCCCGTGAGCGACGAATCGTGCGAGCCTCGCTACACGCTGCCGCCCTCGTTCACTACATTGTGCGGTCTGCGCACGCTGTTGCTCAGTCGCGATCGGATAAACAATGAAGACAAGAAGAACAATAGCACGACGTATTTCACGGACGGAGCAGAGGTTGTCTATGGAGATATGTCGCCTGCAGGAGAAGAGGCCGAGAGTCTATGGAAGTCACGACTGGACATGTTGTTCACGTGGCCCGGCTTGATGGCGGCTCAGAGCCCGAAGCTCAATGCCAACTCGTTGATCGGCATGAGAAACTTCAAGACTTTCGTCGACGAGGATGACGATGTGCCCGAGAGCGCGAATATCGACGCCGGTCCGTACAAATCCAGTCGACAGCGTAAGACCTACACGGAGAATCGCGCCAAGCCGCCAAAGTTTGTGAGATTCGGTTCGCCAAATGAAGACGCCGTCGAtgaagaagaagttgacgacccCGACATTGTTGACATCAGTCAACCGTCAACAAGCCGAGTAGATCCCTGTCAAACGTCAACTAGCTGCGGTGTATCATCGGAACGACAGCGCAAGAGACGCATGTCGGACAGCCGAGACTCTCTTGACGAGGAAGATGTTGACGATCCGGACGAGGTGTTTGTCAGCGAACAACCGTCAAGCAGCCGAGCTCATGTCAATCGACCGTCAAGCAGCGTCAAGGATACTGCGgTTTCACAATCTGGCAGAAGATCGAAAACAACTCCAATCAAAGCGAACGTTCTCAAACCAGCGGCGAACAATCAAACAACAGCACAACCAGTACCAACCCGATCTACGCCACCAAAGACCAAAACGTCAAACGACAAACCCAAGGGGCCGAGAATGATTCACACTTCGCCGCCACGCAAGGGAAAAAAGCGCCGCAAAAAGTAA
- Protein Sequence
- MSQNDNIQVGLGLQPTPVQVTSGIYSGEVIKRRNEVLAKYQAQVDNVYEYYDYQQIDDGDDESCSDFSDANCSEDISDFEPNMPKSQEEETENYKEDVDKIERFLAQDEPGEEFLAKNRSNRAVRSSSRINKGSSKPTTSETVTEKCLASNKKTLQCVLKMEEDLKMKLEKVRDQYDEVTRRINHCLTYKDKCNRGSLFTYLTRLGIPYFKDRQFFHCPGNDDFKEKAKTEYIKNHFVQDVTWTKKHCWKISEAIREWEIEGLKIESKKEIEALARLLKATDDREEVDHLTKKIRAIEKQSFDDLTLADVAGKRGPEGKYDWLKISAQDLNGDKTADECKALWDHYINPNVNVDDWTAEEEVKLKDIAGHYKQQNWEAIAMELGTNRTAYLCVSRFRSELHDEDTNIRFTKEEDDALRHQIETTRFGTYICWSKLEFLMKGRNKNQLLSRWLKLQPNRQKGKFTDHEDLLILNGVRELGNNNFKQVTRTYLPHRFPAHVRNRYLTLIHNCTSGMWEKEEDKLIVNLVSQWGKNWRKINEFFHNRTRSQLRQRYNSIKKHLLRQPNCDGSNNDMTDVQVPTRRTMKHIVHERAKNKKLIKRCAKMTKKELNLALMKKKLGRRNNKRSKNGLLDHRYNEFFNVGLVYPQKPGRVNRECPFEEDVQEHTRALRSLFTLFSVNLNIPNDDVVMEGDFLSLVMKNSLISLRDHKCDNPVPKPPTKKVVTKKSTVPVPVAIPEVTVEEISTADIDLPSHSPNNIDKVTFREDGLNKSTGISQSPFSYTADGYVKKCSEKLLIPVKKVVSKQQSVLAKKKKCIVKPSPKLLPPHSSTQLNSNVNNRKKSHPNKTPKPTPTIGGSSGVPFNPFWAVGSIFWDPDIFWASMPSPPAKVVVAPPVSDESCEPRYTLPPSFTTLCGLRTLLLSRDRINNEDKKNNSTTYFTDGAEVVYGDMSPAGEEAESLWKSRLDMLFTWPGLMAAQSPKLNANSLIGMRNFKTFVDEDDDVPESANIDAGPYKSSRQRKTYTENRAKPPKFVRFGSPNEDAVDEEEVDDPDIVDISQPSTSRVDPCQTSTSCGVSSERQRKRRMSDSRDSLDEEDVDDPDEVFVSEQPSSSRAHVNRPSSSVKDTAVSQSGRRSKTTPIKANVLKPAANNQTTAQPVPTRSTPPKTKTSNDKPKGPRMIHTSPPRKGKKRRKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00242120;
- 90% Identity
- -
- 80% Identity
- -