Bput022158.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- nfxl1_1
- Assembly
- GCA_907164805.1
- Location
- OU015471.1:11120702-11126916[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 1.6 2.9e+04 -3.8 3.2 14 19 162 167 162 167 0.87 2 17 0.3 5.2e+03 -1.5 0.4 4 10 198 204 197 204 0.92 3 17 1.6e-07 0.0028 18.6 16.4 1 19 212 229 212 229 0.99 4 17 8.6e-08 0.0015 19.4 14.0 1 19 265 283 265 283 0.99 5 17 1.2e-09 2e-05 25.4 15.0 1 19 318 336 318 336 0.99 6 17 1.3e-07 0.0023 18.9 13.2 1 18 371 388 371 389 0.97 7 17 0.023 4e+02 2.1 1.1 1 12 398 409 398 409 0.95 8 17 5.4e-05 0.94 10.5 16.5 1 18 423 440 423 441 0.92 9 17 6.4e-11 1.1e-06 29.4 14.7 1 19 450 468 450 468 0.99 10 17 1.1 2e+04 -3.3 1.4 5 10 496 501 496 501 0.89 11 17 0.083 1.5e+03 0.3 6.7 10 19 517 526 514 526 0.89 12 17 0.012 2.1e+02 3.0 5.9 3 12 537 546 529 546 0.84 13 17 0.61 1.1e+04 -2.5 4.9 14 18 574 578 574 579 0.92 14 17 0.86 1.5e+04 -2.9 1.4 6 10 605 609 604 609 0.88 15 17 3.1e-06 0.055 14.4 10.9 1 18 615 634 615 635 0.97 16 17 0.0011 20 6.3 15.4 1 18 646 662 646 663 0.94 17 17 9.1e-05 1.6 9.8 16.4 1 18 708 727 708 728 0.90
Sequence Information
- Coding Sequence
- ATGGAACGTCATGGTAAAGGCCGTGGAAACCCGTGGAATCGCGGAACGCAACACAATAATGGACCAAAAAATCCTCAAACTGCCTTACAAGCAGAAAGTAGATTTGAGAAAGCACGAGCTCAGATGCATGAAGCTGCACAAAAGCACTCGAAACAAGCCTACGAGTCAAGTTCAGAGGAAGAGGAACTGGAAAGTGAAAACATTCTTGGCTCCGTGCTCAAGTCCTACTCTCAGCTGGGAGGCAAGAGTGAAGATCTTGGACGTACCCAGCGGTTCTTGGAAGACGCGTTTCAATCTGGTGCGGCGACATGTCTCATCTGTATCGCGTCTGTCAAGAGGAACGACGCGATATGGAACTGTTCCAACTGCTATTGCTTTTTCCACCTGACATGTATTCAACGTTGGGGGAAAGACAGCGTAATACATCAGAAGCAAGCGTCCGAAGAACAGCCGCGCCCAAAAACAACTCTTGAATTCAACTGGCCTTGCCCCAAGTGCCGCCACGAGTACGTAGAAAGCAGCACGCCACAGCGCTACCGTTGCTTCTGTGGTCGCACTGAAGATCCTGTTTTCCACCCGTGGAACGTCCCTCACTCGTGCGGAGATACGTGCGGCCGGCCGTTACTGCCTCTGTGCGGCCACGACTGCTTGCTGCTCTGTCATCCAGGACCATGCCCACCGTGTCCCAAGACAGTGAAGAGCACATGCTACTGCGCCAAGCAAGCGCCGCGTCCCCAGCGCTGCAGCAACAAGGCGTGGTCGTGCGGCGCTCCATGCGGCGCCACTCTGAAGTGCGGACGCCACACGTGCCCAGCCACCTGCCACCCGGACGACTGCCCGGTGTGCCCAAAGACCAGCCAGCAGCGGTGTCTGTGCGGCGCCAAGCAAGCACTGCGTCCTTGCCTGGACCCGGTGTGGCAATGCGACAAAAAGTGCCTGAAGGCCTACTCATGTGGCAACCACCGTTGTGAGCTGACCTGCCACGCTGGCCCGTGCGGCACCTGTCCGCTCTCTCTCTCTCGCTCGTGTCCGTGCGGCAAGGCTTCCTACACCCTGCCGTGCACGGCAGACACTCCCTTGTGCGGAGACACGTGTGGTATGGCTCTGGAGTGTGGTTCTCACGTCTGTTCGCGGCCGTGCCACCGAGGTAAGTGCGGCAGTTGTTTGGAGGTGATCAAGAAGCGTTGTCGTTGTGGCCTTCACGCGAGAGAACTGCCGTGCCACAAGGTCTACCTGTGCGATACTAAATGCAAGAACAGCAGAGACTGTCGCCGTCACCCGTGCAATCGCAAGTGTTGCGACGGCAATTGCCCGCCATGCGAGAAGCCGTGCGAACGTATGTTGCCGTGTGGACGTCACAAGTGCCAGTCAGTATGTCATCGAGGCCCGTGCTACCCGTGCCCGCTCACGGCCGACGTGTCGTGCCGGTGTCGACACACCGTGCTGTCCGTGCCGTGCGGCCGACAGAAGAAGACCAAACCTCCGCGCTGCACTAAACCCTGCGGCTTGCTGCCTGAGTGTCATCATCCCAGCAGAAAGCCACATCGCTGTCACTTCTCGGACTGTCCTCCGTGCAAAATCATGTGTGGCAAACAGTTTCAAAACTGCGCTCATAAATGTCCGGCAGCGTGTCACTCGGCAGTGTGGGTAACCTTGGAAAGTAAAAAGCCCGCGGGTCCTTGGGAGAAAGTTACGCCTTTGATCGAGCTCCGGGCCCTCCCGTGCCCGCCCTGCGTGGTACCAATGCCCATCACGTGTCTCGGTCAGCACGAGACTGCCAACTGGCCGTGTCACATTGCGCGACCCTCGTCGTGCCAGCGGAAGTGCGGTCAACCGCTGCCGTGCGGGAACCACTCGTGCGACCTGCCCTGCCATCTGGTGAATGGCGATTGCGGAAAGTGCGAGAGGGAGTGCTTGAAGAAGAGGCCCGACGGGTGCAGCCACGCGTGCCGGAAGCCGTGTCACCCGGACCCGTGTGCCCCGTGCGGACAGATGTTGAAGTTGCGCTGTCACTGTTCGTTGAACCAGGTGTACTTGAGGTGTAACGAGTGGACGGCGGCCGATCAAGAGAAGAAACTCGCAATGAAGAGTTGCACAAACCAGTGTCCGAAGAATTACGAATGCGGCCATCAATGTCATACCCCGTGTCACACGGGTGACTGCCCCGATCCCGCGTCGTGCCGCAAGAAAGTCAAGGTGTTCTGTTCCTGTCGTCGTCTCCGCCGCGAGTTCCCGTGCGATGAAGTGCGCGCCGACCGAGCCAGGGTGCCCTGCGACGATGTTTGCTACCAGCTCAAGGAGCAGGAGCGCATGACGAAGGAAGCAGAGCTCGAACAGAAGCGTGTCGAGGAAGAAAACAAGAACAGGGCGGAAGTGGAGAAGTTCGAGAAGAAGTTTCAGGGGCGTAAGAAATACCGAGAACGAAGGCAGAACGTCGTCGAAGAGGACATATCTTTTTTGAAACGTTATTGGGTTTATTTTGTCAGCATTTCGGGCATTCTTCTAGCGGCTTACGTATTAATATTCAATTAG
- Protein Sequence
- MERHGKGRGNPWNRGTQHNNGPKNPQTALQAESRFEKARAQMHEAAQKHSKQAYESSSEEEELESENILGSVLKSYSQLGGKSEDLGRTQRFLEDAFQSGAATCLICIASVKRNDAIWNCSNCYCFFHLTCIQRWGKDSVIHQKQASEEQPRPKTTLEFNWPCPKCRHEYVESSTPQRYRCFCGRTEDPVFHPWNVPHSCGDTCGRPLLPLCGHDCLLLCHPGPCPPCPKTVKSTCYCAKQAPRPQRCSNKAWSCGAPCGATLKCGRHTCPATCHPDDCPVCPKTSQQRCLCGAKQALRPCLDPVWQCDKKCLKAYSCGNHRCELTCHAGPCGTCPLSLSRSCPCGKASYTLPCTADTPLCGDTCGMALECGSHVCSRPCHRGKCGSCLEVIKKRCRCGLHARELPCHKVYLCDTKCKNSRDCRRHPCNRKCCDGNCPPCEKPCERMLPCGRHKCQSVCHRGPCYPCPLTADVSCRCRHTVLSVPCGRQKKTKPPRCTKPCGLLPECHHPSRKPHRCHFSDCPPCKIMCGKQFQNCAHKCPAACHSAVWVTLESKKPAGPWEKVTPLIELRALPCPPCVVPMPITCLGQHETANWPCHIARPSSCQRKCGQPLPCGNHSCDLPCHLVNGDCGKCERECLKKRPDGCSHACRKPCHPDPCAPCGQMLKLRCHCSLNQVYLRCNEWTAADQEKKLAMKSCTNQCPKNYECGHQCHTPCHTGDCPDPASCRKKVKVFCSCRRLRREFPCDEVRADRARVPCDDVCYQLKEQERMTKEAELEQKRVEEENKNRAEVEKFEKKFQGRKKYRERRQNVVEEDISFLKRYWVYFVSISGILLAAYVLIFN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -