Bput029152.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- -
- Assembly
- GCA_907164805.1
- Location
- OU015463.1:47085566-47089648[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.02 1.8 10.1 4.6 2 23 274 296 274 296 0.91 2 12 0.046 4.1 9.0 4.2 3 23 369 390 368 390 0.92 3 12 0.014 1.3 10.6 0.6 2 23 601 623 601 623 0.92 4 12 0.011 0.96 11.0 3.7 2 23 694 716 693 716 0.97 5 12 1.6 1.5e+02 4.1 2.0 3 23 753 774 751 774 0.92 6 12 0.015 1.4 10.5 3.6 2 23 828 850 827 850 0.96 7 12 0.033 2.9 9.4 2.0 3 23 865 886 863 886 0.94 8 12 0.00024 0.021 16.2 1.2 2 23 937 959 937 959 0.95 9 12 7.6 6.8e+02 2.0 2.4 1 21 1048 1068 1048 1070 0.92 10 12 0.0034 0.3 12.5 0.2 1 23 1085 1107 1085 1107 0.99 11 12 6.7 5.9e+02 2.2 4.5 1 23 1182 1205 1182 1205 0.90 12 12 2.3 2e+02 3.7 2.7 1 23 1231 1254 1231 1254 0.97
Sequence Information
- Coding Sequence
- ATGCTCACGGCCCCATCAGCAGTCCGCCCCACCGAAGTGGGACTCTCCGATGCAACGGGAATCATCTCAGACAGCGATGACAACTCCCTCTCAGCCGACGAGATCGAGCAGAAATTGCCACATAGCACGTCAGCCAAGAGGTCTCTCACCGAACACCTCAACGACGACCCTGAACAAGGCCAGGCAAGCAAGAAGAGGAGAAAACAGTCGAAGCCGGTACGTATTGCAGCGCTGTCAACAACACCAGCCGAGAGAGAAGACAGTGAAGACGAGCAAGAATGCAATGAAGAAGGTAAGCGAGATTCAAATGAATCGAGTCCGACAAGTGAAGAACTACCAACCAGCTATCCTCTCGTTACAGATCTGTTGAACTCAAACGAAACTGTTATTTTTAGTGTAGATCATGTTAATGGTCAGAGTCAATTTCAACATCCTAAACCAAAGGCAGATGTTGAAACCTTACGTAATGTAAGATCAGATATTCCTGTGTATCCAAACACTTCAAAATCGTGTTCGACTTCACCAATCGATGTGATAGTAGGTTCTTGGATGTCCGAGCTTCACAGTAAAGCGGAAGAGTCTTTAAATGGGACCAAACCACTAACAAACCACTCTCCCACTGATGGAGGACTCAAAGCTCCACCGGGAGCGTCGAGTCCATTTAATGACAGGGCGCTTGTAATGCCAGGTTATTTACCGCTTGGCCCATCACCATTCCTAGTGTCAGTTCTTTCCCAAGGTAGCGGGCAAAATCCAACAAACTTGATGTCACAGCAATCTTTTTCCCAAAATCCAATTAGAATATTCAATCCAGATGCGTACTGTGAACTTTGCAACAAGGAGTTTTGCAACAAATATTTTTTAAAGACTCACAAAGCAAACAAACATGGCATCTATGCTGACTCCCCCAGTTATCCGCCAACTGGTACATCGATACCGGGCTCTCCGTATGCTGCTTCCTTCATCGCAACATCGATGACTACACCTCCTATGTCAGTGCTTCCTTTAACAAAACAGGCCCATCCGGCGAAGCCTGGCAGTCTGACGTCACAACCCGTTGAGCTGGAGAGTGCATCAACATTAGAAGGGGCGATGAGAGCGAATTGCGACATTTGCCAAAAGAAGTTTTGTAACAGATATTTTGTACGTCGGCATAAGGTCAAAGTTCATGGTATTGTCGATGATTCCATAGACTCTGAAGACAATGGTTCTCCCAATCCAGAAACTGTACTGAAACAAGATTGCTATCCTAGCAGTACTTCGGCAGGATCAGATGCAGAATCAAATGTTTTGGAAATTGTAAAAATGGAGGCTCATGCACCAGAAATCGAATCTAGTCACTCGAATGCACAAGGTAAGGACAAGGCGCAACATCAAGGCAGGCAGTCTCCTGACCACTCAGAAGTCGAGGAAGGCGAAGAGACGTCTGGAAGGATATTGGACAACACTCATTGGGTGCAAAACGGCGTAGGTACAGCTGTGTCTTCCACGCCAATTAAACACGACGGAGAACTCTCTGTCGACCGACTTCGAAGACTAGGTGTGATCAACGTTGACGCTTTCTGTGAGATTTGTTGTAAAGAGTATTGCAACAAGTATTTCCTGAGAACACATAAGATGAAACGTCATGGAATACTAATAGTAGATGGAGATGGAAAAGACGGCCGATTAATGGCAAGTGGCAGTGGATCGTGGAGTTCACAAACAAGTCCTTTGAATCTGATTGTAGCCGAGCAAGGGACGAATAGTTCGGATTCTGGAGGAAAAATACGCACAGAAATATCAGACGGAGAAGATCCAGAATGTGACATCTGCGGCAGACGATTCCAAAGTACGTATTTGATGCAGATGCATCGTTCTTATTTGCACAGTAATGATAAGTTGACTGATCCCTTGAGAGAAGATAGCTCCGAGGAAAATGTGGGAAATCTTAAAGACCAATCAGAATCAGAGGCAGGTCAACTAAATAATAGCGGCGATTGTAAAATGAACGGTGGAAAAAATAACGTGAGTGCTGATTTACAGAAATTGCAAACGATGATTTTGCAATTAAATAATCTAAACGTGAGCCAAGTCACAACGTGTACTATATGTAATAAAGATTTGGAACATTGTTATTTTCTCCGTGCTCACATGATGACAGAACATGGTGTACTCTTCGAAGAAAACAACGGATTCAACGGTCTCAAGCAACATTCTTCTGGCGAAAATTCCCCTTCCGATTCTCCACCGCCATCTAGCCCATCTCAGACATTTTGTTTCATTTGTAAAAAGGACTACTTTGCAAAATTCTTTTTAAAACAACACATGGATGAATTTCACGGACTACCTGTACCTTCGGCAATCACAACAGCCATTTCGCTTGTAAATGATAAAGTTAAAGAAGAATTCGATACAAGTGATATCCCCGATAAAACTCCAATCCAGATTATGTCACCCCTGACTTCCGATAAACGTGTGTCCCTCACACCAACCAGCAGCTACTGTGAAATCTGTAATAAAGAACTTTGTAACAAGTACTTCATGAAAACGCACATGCAACGTATGCACGGTATTGAAATTGAGAACGGAGCTCAGATTGGTGGTGTAATATGTGACATCTGTAACAAGGAATTGTGCAGCAAATATTTCCTGAGAGTCCACAAACAAAACACTCATGGAATTGTAGAGGAGGGTAGCACTCGAGATAGTATTGGTATGCACACGAACGGTGTATCGTTGAATCCACCACTTTCTGAAAATGATCAAGCTCTCAAACCGTCAGACCTGGGAGATCTCGGCAATCGTTATTTCACCCACTTTACAGAAGTGTGCTCATTTTGTAATCGGCGATTCCGAAGTTCCAAATGGTTGAAGGCACATCTCATGAATGATCACGGAGAAGCAGGCATAGGGAAATGGAAAGAATTGGAATTACAATATCATCTTCAACGTCCAAAACAAACGACTAATAAGCTACCGGGAAATTCTAATAACGTCCAGTTTGGTCCAGGATTGAACAACAGTCCTACGCTCAAGATACCGAATAGTTGGGGTACCCTAGATCAGGCACATGACTCATCGGGAGAGCAAACTGGAGAAATAAGAAGCCAAGAAGTATTATCGAGTCTATTTGGCGCTGGAGAAACCACTGGTAAAAGCTATGACTGTTCATATTGCTCTTTCTCGACACCAGTCCTTTCTTTCTTATTTGTTCATGAAAGGTGCCATACTGGCATCTCTTCGCAGTCGATCCCAGATCCTTCTAAGCCTTTCCAATGCCCTGTATGCTTGCAAAGCTTCCTACAAATGGAGAGTCTTCAACAGCATATTTTGACACATCAATTTTCTGGACTCTTGAACCCATTCTTTACTCCTACGACAGCTTCCACATCATATCCACAGACATCATCTACTACATCAGCACTTGTCAACAAAAATGTTGAGCTTAGCACCGAGTGCCAACCGCAAGTTGAGGTAAAAGAGCAGCTGTCAGATGCTGACGCTGATATTGTAGCCATTGTTGAACAAGACTCGTCTGCAACACCAGGCAGTAAGAATAAGTTCCGTTGCTCACGTTGTTTTCAACGTTTCCGATCAAGAGAGTTATGTCTGATACATGTGCAAAGTAAACACGGTCCCAAATGTAACGAGCCTTTAGCATCGTCTGCATCCGAAACTGAAAATATTTTGATCACACCACAAGGATTACATAAGTGTATGTGGTGCAATTTTGCCTCACCGCATTCCAGCATCGTGAAAAAGCATATCAGGAGGGAGCATAGGGTAGCAAGTTCTCATCACGAGATCCGTTACGAACCAGATACTGAATCCTGGTTAGATATGAAAGACGCAATTACCGATGAAGTAAAGAAGAAGCTTCAGGATGCTGCTGGCAAGTCTCAGATTCCTGCCTCGTACGCCGTCCCTCAAAAACATCTCCCTCATTCCAATCGATTTATTATGCAACCATTCCTTCTTGAGGAGCCACAATCTCCTCACGACCCCACAAAGCTACAACTTGTTCCATCTCTTGTATTTCTACCGGTGAAAGAGAAACTGTCCGAACCACTGACATTGTCGTTGACAGTGACCCCAGCCTAA
- Protein Sequence
- MLTAPSAVRPTEVGLSDATGIISDSDDNSLSADEIEQKLPHSTSAKRSLTEHLNDDPEQGQASKKRRKQSKPVRIAALSTTPAEREDSEDEQECNEEGKRDSNESSPTSEELPTSYPLVTDLLNSNETVIFSVDHVNGQSQFQHPKPKADVETLRNVRSDIPVYPNTSKSCSTSPIDVIVGSWMSELHSKAEESLNGTKPLTNHSPTDGGLKAPPGASSPFNDRALVMPGYLPLGPSPFLVSVLSQGSGQNPTNLMSQQSFSQNPIRIFNPDAYCELCNKEFCNKYFLKTHKANKHGIYADSPSYPPTGTSIPGSPYAASFIATSMTTPPMSVLPLTKQAHPAKPGSLTSQPVELESASTLEGAMRANCDICQKKFCNRYFVRRHKVKVHGIVDDSIDSEDNGSPNPETVLKQDCYPSSTSAGSDAESNVLEIVKMEAHAPEIESSHSNAQGKDKAQHQGRQSPDHSEVEEGEETSGRILDNTHWVQNGVGTAVSSTPIKHDGELSVDRLRRLGVINVDAFCEICCKEYCNKYFLRTHKMKRHGILIVDGDGKDGRLMASGSGSWSSQTSPLNLIVAEQGTNSSDSGGKIRTEISDGEDPECDICGRRFQSTYLMQMHRSYLHSNDKLTDPLREDSSEENVGNLKDQSESEAGQLNNSGDCKMNGGKNNVSADLQKLQTMILQLNNLNVSQVTTCTICNKDLEHCYFLRAHMMTEHGVLFEENNGFNGLKQHSSGENSPSDSPPPSSPSQTFCFICKKDYFAKFFLKQHMDEFHGLPVPSAITTAISLVNDKVKEEFDTSDIPDKTPIQIMSPLTSDKRVSLTPTSSYCEICNKELCNKYFMKTHMQRMHGIEIENGAQIGGVICDICNKELCSKYFLRVHKQNTHGIVEEGSTRDSIGMHTNGVSLNPPLSENDQALKPSDLGDLGNRYFTHFTEVCSFCNRRFRSSKWLKAHLMNDHGEAGIGKWKELELQYHLQRPKQTTNKLPGNSNNVQFGPGLNNSPTLKIPNSWGTLDQAHDSSGEQTGEIRSQEVLSSLFGAGETTGKSYDCSYCSFSTPVLSFLFVHERCHTGISSQSIPDPSKPFQCPVCLQSFLQMESLQQHILTHQFSGLLNPFFTPTTASTSYPQTSSTTSALVNKNVELSTECQPQVEVKEQLSDADADIVAIVEQDSSATPGSKNKFRCSRCFQRFRSRELCLIHVQSKHGPKCNEPLASSASETENILITPQGLHKCMWCNFASPHSSIVKKHIRREHRVASSHHEIRYEPDTESWLDMKDAITDEVKKKLQDAAGKSQIPASYAVPQKHLPHSNRFIMQPFLLEEPQSPHDPTKLQLVPSLVFLPVKEKLSEPLTLSLTVTPA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00243818;
- 90% Identity
- iTF_00243818;
- 80% Identity
- -