Basic Information

Gene Symbol
ZFHX3
Assembly
GCA_907164805.1
Location
OU015470.1:19170739-19178712[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.92 81 4.9 0.4 1 23 53 76 53 76 0.85
2 15 0.039 3.5 9.2 0.1 1 23 92 115 92 115 0.92
3 15 0.0031 0.28 12.7 2.7 1 22 215 236 215 239 0.92
4 15 0.089 7.9 8.1 1.6 3 23 253 276 251 276 0.88
5 15 0.015 1.3 10.5 1.3 1 23 294 316 294 316 0.97
6 15 0.0068 0.6 11.6 0.7 2 23 323 345 322 345 0.96
7 15 0.00087 0.077 14.4 3.9 1 23 454 478 454 478 0.92
8 15 0.01 0.92 11.0 0.6 1 22 498 519 498 522 0.89
9 15 0.0014 0.12 13.8 0.2 1 23 582 606 582 606 0.93
10 15 0.79 70 5.1 0.1 3 21 728 746 726 747 0.93
11 15 2.7 2.4e+02 3.4 2.1 2 19 872 889 871 894 0.91
12 15 0.00022 0.02 16.3 2.5 1 23 1531 1553 1531 1553 0.99
13 15 0.00097 0.086 14.3 0.3 1 23 1642 1664 1642 1664 0.98
14 15 0.021 1.8 10.1 0.2 2 23 1815 1837 1814 1837 0.96
15 15 0.62 55 5.4 3.5 2 23 2122 2145 2122 2145 0.89

Sequence Information

Coding Sequence
ATGTTTGATTTTGTCTGCATTTCAGATCGGAAGGAAAGTCAACGAAGCCGCGAACCGAGCCGAGAACGTTCGGAGTCCGTCAAAAGCGAATCGAAAGAGAATCTCCTCAAGTTCGTGATGGACAACCAAGACGCCGACGAGCCAACCAACGACGTGCACATGTGCCCCTATTGCAACTACACGAGCTCCTCCGAGATGCGCATTCAGGCGCACGTGTTGGCGCAGCACTCCCAGGCCGAACACTCCCCGCCGGCATCCTCTCCCGTGCGCGACTTCCTCTGTCCGCTCTGCCAGGACGGCTTCCGAGATCGCACCGCCCTCGAGCGTCACGTCATGCAGATCCATTCCGTCAACTCCGAAGGTCTTCAACGTCTCCTCCTATTGGTCGATCAATCCCATTGGTTGAACCACGTCAACCGTTCGACTCCTTCAACACCTCAGAACAATCCTAATCAACAAACACCTCCATTGTCAAATTCTCATATCCAGATGGTCAGTCCGTCGTCGGCAAGCTCCGGTGGCTCATCGATCGGCGGTAAGGACTTAGATACGAGTAAACAGAATAATTCCGATGCCAATTCAGAGGATCGTGATGATCGACCTGATTTGATGTCACCCTCCCCCGACGATGTCGAGGAGGAGTACCGATGTCAGACATGTTTCAAGAGTTTCAGAAACATTGATGAATTGTGTTTACATCAGAATGAGAACGGTCATTTCGAGTTGAAACAGACTCCGACGGGGACGGGTTACCTGTGCTGGAAGAAGGGTTGTAATCAGTATTTCAGCACGGCGCACAGTCTGCAGATGCACTTCCGAGAGATCCACGTTCGAGGCCCGCCTCAGGGTATTTCAGTGTCCGAGAAGCACGTGTACAAGTACAGGTGTAACCAGTGCAGCCTCGCGTTCAAGACGGTCGAGAAGTTACAGCTTCACTCTCAGTATCACATGATCAGAGACGCGACGAAGTGCGTGCTTTGCGGCCGGAGCTTCCGGTCTGTCCTCGCGCTGCACAAACACGTCGAGACCGCGCACTCGGAGCTGTCCGAAGACGAGCTCAACGCGTACAAACACAGTCTGATGTCGAACCCTCTCCTATTGGCTGGACTCAGCGGACAAGTGTTGGACGCGTCGACCAATGACCTGCTCAAGAAGGAGAGTTTGAAAATGGAAACGGATGACATGATGGATGATGATAGTCCCAGTAAGGATAACCAGGACGAGGGAATGGGTAACAACCAGAGTGGAGACGGAGAGAACAGCGATGACTCTGTCGTGTACAAGGAACAACAGTTCCTGGAGGATTATTTGAACAGCCAGGCGATTGCCGAGGATAGTTACAATGACCCGAACAGGAAGTATAAATGTCATCGTTGTAAAGTAGCGTTCACTCGTCAGAGCTATTTGACCAGCCATAATAAGACGCTTCTACATCGCAAAGGGGAGAAACTAAGTTACCCAATGGAGAAATATCTAGATCCAAATCGCCCTTATAAATGCGACGTGTGCAAAGAATCGTTCACTCAGAAGAATATCCTCCTAGTGCATTACAATTCTGTTAGTCATTTACACAAACTGAAGCGCGCCATGCAGGAACAACAGCAACACAACAATAACAACAACAACGGCATGACGTCAGTATCACCGCATGCGGCAGCAGCGGCACTGGCGGCGAGTCTCGGCGTCACACCGCCACCGACTCCGAAGTCAATCAGCTCGGTCGACGATGACGACAAGAAACCTTACAAGTGCAACATCTGTAAAGTGGCTTACAGTCAGGGGTCGACGCTAGATATCCACATGCGATCCGTTCTCCACCAGACCCGCGCGTCCAAGCTGCAAGATCTGGCGATCAGCGGTCAAATCGATCTGAGCAAGCCTCTTATCGAACAGCCGGAACCTCAGAAAGCGCAAGAACAACACAAGAAAATGATGCAAGACATTCTGGGCAGCACGCCGAAACAGCAATTGACTTCGCCAGCGTCCTCTGGAAGCGGCAGTAGTATAACTTCTCAAGTGGCCTCTCTCGTAATGGGTTCGTCGCCCAACAGCATAGTTCCTACTAACACCACCGTCACGTCCACGTCGCTGTCCTCGTCAGCGTCCTCCATGACCAACGCCCTACCTACGAGCGCGACCTCGATTGCCCAATCGCCTACAACATCAAACGGTATGTTAGCATGCCAACGATGTTCGGCACTATTTGTCAATCAAGAACAGTTGTCCACTCATCAACAGTTGTATTGCCTGTTTGGTAGTCCCATGTCAATGTACCCGCCGTTGCCGGCCAATTTGAATTCCCCGCAACCCAATAAGACGCCACCCCCAATGATGACTAACCCTCAGGATGAGAATTACTCTAGAATCTCTATTCCCAACAAGAAACATTCACAAGTTTATAAACACCTGCTTGAAAGTTTCGGCTTTGATCTTGTGATGCAATTCAACGAAAACCACCAAAAAAGGCAAAAGAATAAAGATCGTGAAAATGATGAAATTGTGTTGGCAGAAACGCCAAGCGGCGAGGAGGCAGCTGCCCCGGCCCAGTCACCGGTCACGATCAAGGTGGAGGAGGACGCGATGAGCGAGGATCTGCCCGAACTGGCCAAGTCCTCGTGCCAGCATTGTCGCAAGGACTTCTCGAGCGTGTGGGTGCTGAAAGCGCACTGCGAAGAAGTCCACCGCGACCTCGTGCCGTTCGAATTCCTCGAGAAGTACGCACAACAATACAAGAGCGAATATGAGAAGAAAGTCATTACGACTTGCTCGATCTCGACACCGGGCACGGGGAGCGTGACGACGACCTCCAGCGACCTCACCCCCGAGCGGGACATGGAGGACAACAAGGAAGCGATCCAGGCGAAGATTGCCGCACAACAAAGAGGTACTCCACCCGACACGCCGACAACACCGACGGCGTCCTCGACTCCCGCGTCCAGCACGGACTCGATCCCGGTGACGATGTCGTCGCAGATGGCGGCCGCGGTTGCTGCAGGGATGATGCAAGCCGGCGCCAATAATCCAAACATGTCGATGTCGCTGGCTCAGCAGATGAACGAGATGCAGGCAGCGTTGAACGTTATGGCGGCGTCGCAACTGCAGCAACAGTTGTCCCAGTTCAATCCGATGATGATGGGGATGATGGGACTGCCACTGGGGTTGAATATGAACGCGCTGGCGGCCATGAATCTGCAGCCACCGCTGGTCCCGATGATGATGCCACCGCCTTCCTACGAACAGATGTCGCAGATGTCTCAGGCGCAGTTCTCGCCGCAAGGGGGCGGAGGGATGGATCAGCACTCGGCTATGATGGCGAAACAACAACATCATCTTCTGCAACAGCAACAGCAAGCGGTATCCGCCGCTCAGCAGAAGCGAGCTCGTACGCGCATCACCGACGATCAACTCAAGATTTTACGCGCCCATTTCGACATCAACAATTCACCATCCGAAGAACAAATCCACGAGATGGCTAGTCAGAGCGGTTTACCGCCGAAAGTGATCAAACACTGGTTCCGTAACACCCTCTTCAAGGAGCGGCAACGCAATAAAGACTCCCCGTACAACTTCAACAATCCACCGTCGACTACGTTGAATCTAGAAGAGTATGAAAAAACCGGAGAAACAAAAACGGTACCTTTGAATAGCAGTAGTAGTTCAGGTGGCTCCTCGGAAGATCCCCCAGTACAACCGACTGTCAAAGAATTCATTCCTAAATTACCTCCGACAGTTAATAAACGTAAACAATCTACCCCGCAGCCCTTTCCGCCACCTCAGCCCTTTCCCCAAACGCCAGAAATGATCAAAATTGAGCCCAGAGATCCTGCTACACCCCAGGACGACAATCAGGATCTCAAGTTCAATAATCTCTTCATGAATGAGCATAGGAAAGAGGCTGAAAGAATCATAAGAGATCTGCCGGAAGATAAACCCCACAATCTACATCAACCACCTCAGAGTCCTGTGAGCACAGTGTCCGGTTCGTTTCGCGATCAAATGTCGCCACGAATGTCGTCCCCGGACCGCATCACCCTGACGTCGATCATCGCGTCACAGCTGGGTACAGATGCACTCACGATGACCAACCCGAACATGTCGAGCATGACCGTCACGTCGACGATGCTGCCGCCGAAGATGACGCCGACGAGCTACGGGCCAAACAGTCAGATCCCGACGTCGCCGATCATGAACATGCCGACGGCGCGTAGCGTCAGTCCGGGACGGTCTTATAACAATAACTCCTCGGATGGATTCAGTCATGCTTCGCTCACAGGAGGATGTGGCGGAGGGAACAGTAACGGAAGTAACTCGTCGGGAGGTTCCTCGGGGAAGAGAGCTAATCGAACTCGTTTTACCGACTACCAGATCAAAGTACTGCAAGAGTTCTTCGAGAACAATGCTTACCCGAAGGACGATGATTTAGAGTATTTGTCAAAGCTCTTAGGTCTCAGTCCGAGAGTGATTGTGGTCTGGTTTCAAAATGCGAGACAGAAAGCAAGGAAGGTGTACGAGAATCAGCCCCCCGTGGAGGCGCCGCCTGGTATCGGTGAAACAGAAGCTAACCGATTTCAAAGAACACCGGGGTTAAACTATCAGTGTAAAAAATGTTTACTGGTATTCCAAAGATATTACGAGTTGATACGTCATCAGAAGACGCATTGTTTTAAAGAGGAGGATGCGAAGCGTTCTGCACAGGCGCAAGCTGCTGCTGCACACGTCGCCGCCATCCACTCGTCCGAGGACTCTGACTCGAGTATCTCTGAACAATGCCAACCTCAGTCACAACAACACATGATGACAACGAGTAATCCAACGACTCCAGCCCCTGCGGTGACTCCAACGCCATCTGGACCACCGTATCCACCATCGCCGGCGCCTAGCAACGCTTCTACTAATAATGCTGACAATTCCAAAGAAGGTACATTCCAGTGTGACAAATGCAACCTCGTGTTTCCTCGTTTTGATCTCTGGAGAGAACATCAACTGGTCCATATTATGAATCCTAACCTTTTTCCCTCATATCCTCCCGATAGTCCGTTCGGGATTCTTCAACAACACGCCCAGATCCAGCAACAACAGCAACAACAACAAATGGCTGGAATGGGCGTCGCCGACTTGTCGATGAATTCTTCGGGAGGATCACCACATCCTTTGGCGTCAATGCTTTCGGCAAACAAAAGAAAATTTGATGAGTACGATGATCCAATGGACCGTGATTGCGATCAGCCCAAAGACAAGCGTCTACGAACCACCATACTTCCCGAACAGTTAGACTACCTCTATCAGAAGTACCAACTTGAGAGCAATCCCTCGAGAAAGATGCTGGAGAATATTGCCAGGGAAGTGGGTTTGAAGAAAAGAGTTGTCCAGGTGTGGTTTCAGAACACTCGTGCACGGGAGCGAAAAGGGCAATTCCGTGCACATGCCCAAGTGATCAACAAACGTTGTCCATTCTGTCCGGCGTTGTTCAAAGTCAAATCGGCTCTCGAGTCGCATCTGGTCACGAAACACGCCGATCAGTGTACTCGGGGGGAGATCAACATCGACAACCTACCCGACGAGGAGCTGAGCATGGAGTCGACGTCGTACACCTCGTCGCAGATGGGCGACGGCGCCAAAACACCGAGCAACTTCGGTGGCTCGACGACGCCGACTCCGAACATGATGCCGCCGTTGTTTCCTCCGTTTCACACCGACATGGAGAACTCTTTGAAGAAGTACTACGAGGAGTCGATGAAGCGATACATCACCGAACTGCAGGCTCATCACGCGGCGCAGAACGGAGGCTTGAAGGAAGGCGCCGCGACGGATCTGACGATGAAAATCAAACAAGAACCGAATGCTCCCGGAGAGGGAGGTGCCGTCGGACCAGGAGGGGATGCCCCTTTAGATCTGAGTAAACCAGTAGATCTGAGTCGACCGATAAAGCTCTCTATGGACCATGAATCTAGAATGATAACAGAGCCAGGTCCTTTCACAGATCTCAGTGAACGAAGTATATTCTATGATGATGACAGTATGTCGGAGTCGATGGATATGATGGACGGTGAAGAGAGCAATCCAGCTTCTCCGGCGTCGAGTACTCAAAGCGGACACCAGCGCCAACAAGCATCTGGCGGGGGAAAGAGATACCGAACTCAGATGAGCAGCATCCAAGTCAAGGCCATGAAATCATTGTTTAATGATTACAAAACACCAACAATGGCCGAATGTGAAATGCTCGGACGTGAAATCGGCCTCCAGAAGCGTGTCGTGCAAGTGTGGTTCCAGAATGCGAGAGCAAAAGAGAAGAAGTATAAGATTGCTCTGCAGAAGGCTCTTGGAGGACCGGAGAGTCAGATCGATTCGTCTCGACAACCGGAAGAATGTAAACTATGCCAATTCAAATACTCACATAAATATTCCGTACAAGATCACATATTCACCAAGAAACATATCGACAATGTGAAATTACATCTGGAAAACGGGAAGAACGACATGTCTGGGAATAACAGCGACGGAGACTTCACCGTTCCTCCCGTGCCTGGATCTTCTGGAGGTAATGCTGACTCGACGACGGCGACGTCCCCTCAGTTCAACAACAACACGAATCAGCAACAACAACTGGCTCAGCTTCAGATGCTGCAAATGGCCGCTGCTTCGGGGATGACTCTGCCGAACTCGTTGTCGATGGCGATGGCTGCGGCGACCAAGGACCAGCAACACGGGTCCAAGTCGCCCGGGCCGGAGGATATGGCGCTGCTCCAACAGCTGTACGGGATGGGACTGGCCGGCGGTTTCCCTCAGGGCAACCTCTTCCTGCACCCTGCCATGTTCGGCGCTTCTGGTGAGTCCTCTTGA
Protein Sequence
MFDFVCISDRKESQRSREPSRERSESVKSESKENLLKFVMDNQDADEPTNDVHMCPYCNYTSSSEMRIQAHVLAQHSQAEHSPPASSPVRDFLCPLCQDGFRDRTALERHVMQIHSVNSEGLQRLLLLVDQSHWLNHVNRSTPSTPQNNPNQQTPPLSNSHIQMVSPSSASSGGSSIGGKDLDTSKQNNSDANSEDRDDRPDLMSPSPDDVEEEYRCQTCFKSFRNIDELCLHQNENGHFELKQTPTGTGYLCWKKGCNQYFSTAHSLQMHFREIHVRGPPQGISVSEKHVYKYRCNQCSLAFKTVEKLQLHSQYHMIRDATKCVLCGRSFRSVLALHKHVETAHSELSEDELNAYKHSLMSNPLLLAGLSGQVLDASTNDLLKKESLKMETDDMMDDDSPSKDNQDEGMGNNQSGDGENSDDSVVYKEQQFLEDYLNSQAIAEDSYNDPNRKYKCHRCKVAFTRQSYLTSHNKTLLHRKGEKLSYPMEKYLDPNRPYKCDVCKESFTQKNILLVHYNSVSHLHKLKRAMQEQQQHNNNNNNGMTSVSPHAAAAALAASLGVTPPPTPKSISSVDDDDKKPYKCNICKVAYSQGSTLDIHMRSVLHQTRASKLQDLAISGQIDLSKPLIEQPEPQKAQEQHKKMMQDILGSTPKQQLTSPASSGSGSSITSQVASLVMGSSPNSIVPTNTTVTSTSLSSSASSMTNALPTSATSIAQSPTTSNGMLACQRCSALFVNQEQLSTHQQLYCLFGSPMSMYPPLPANLNSPQPNKTPPPMMTNPQDENYSRISIPNKKHSQVYKHLLESFGFDLVMQFNENHQKRQKNKDRENDEIVLAETPSGEEAAAPAQSPVTIKVEEDAMSEDLPELAKSSCQHCRKDFSSVWVLKAHCEEVHRDLVPFEFLEKYAQQYKSEYEKKVITTCSISTPGTGSVTTTSSDLTPERDMEDNKEAIQAKIAAQQRGTPPDTPTTPTASSTPASSTDSIPVTMSSQMAAAVAAGMMQAGANNPNMSMSLAQQMNEMQAALNVMAASQLQQQLSQFNPMMMGMMGLPLGLNMNALAAMNLQPPLVPMMMPPPSYEQMSQMSQAQFSPQGGGGMDQHSAMMAKQQHHLLQQQQQAVSAAQQKRARTRITDDQLKILRAHFDINNSPSEEQIHEMASQSGLPPKVIKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYEKTGETKTVPLNSSSSSGGSSEDPPVQPTVKEFIPKLPPTVNKRKQSTPQPFPPPQPFPQTPEMIKIEPRDPATPQDDNQDLKFNNLFMNEHRKEAERIIRDLPEDKPHNLHQPPQSPVSTVSGSFRDQMSPRMSSPDRITLTSIIASQLGTDALTMTNPNMSSMTVTSTMLPPKMTPTSYGPNSQIPTSPIMNMPTARSVSPGRSYNNNSSDGFSHASLTGGCGGGNSNGSNSSGGSSGKRANRTRFTDYQIKVLQEFFENNAYPKDDDLEYLSKLLGLSPRVIVVWFQNARQKARKVYENQPPVEAPPGIGETEANRFQRTPGLNYQCKKCLLVFQRYYELIRHQKTHCFKEEDAKRSAQAQAAAAHVAAIHSSEDSDSSISEQCQPQSQQHMMTTSNPTTPAPAVTPTPSGPPYPPSPAPSNASTNNADNSKEGTFQCDKCNLVFPRFDLWREHQLVHIMNPNLFPSYPPDSPFGILQQHAQIQQQQQQQQMAGMGVADLSMNSSGGSPHPLASMLSANKRKFDEYDDPMDRDCDQPKDKRLRTTILPEQLDYLYQKYQLESNPSRKMLENIAREVGLKKRVVQVWFQNTRARERKGQFRAHAQVINKRCPFCPALFKVKSALESHLVTKHADQCTRGEINIDNLPDEELSMESTSYTSSQMGDGAKTPSNFGGSTTPTPNMMPPLFPPFHTDMENSLKKYYEESMKRYITELQAHHAAQNGGLKEGAATDLTMKIKQEPNAPGEGGAVGPGGDAPLDLSKPVDLSRPIKLSMDHESRMITEPGPFTDLSERSIFYDDDSMSESMDMMDGEESNPASPASSTQSGHQRQQASGGGKRYRTQMSSIQVKAMKSLFNDYKTPTMAECEMLGREIGLQKRVVQVWFQNARAKEKKYKIALQKALGGPESQIDSSRQPEECKLCQFKYSHKYSVQDHIFTKKHIDNVKLHLENGKNDMSGNNSDGDFTVPPVPGSSGGNADSTTATSPQFNNNTNQQQQLAQLQMLQMAAASGMTLPNSLSMAMAAATKDQQHGSKSPGPEDMALLQQLYGMGLAGGFPQGNLFLHPAMFGASGESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00894585;
90% Identity
iTF_00241990;
80% Identity
iTF_00241990;