Bput031420.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- zfy1
- Assembly
- GCA_907164805.1
- Location
- OU015475.1:551727-555289[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.002 0.17 13.3 3.6 1 23 156 179 156 179 0.98 2 19 0.0031 0.27 12.7 2.3 1 23 185 207 185 207 0.98 3 19 0.0026 0.23 12.9 5.8 1 23 213 236 213 236 0.98 4 19 0.0054 0.48 11.9 3.6 1 23 242 264 242 264 0.97 5 19 0.02 1.8 10.1 3.3 1 23 270 293 270 293 0.95 6 19 0.0022 0.19 13.1 3.7 1 23 299 321 299 321 0.98 7 19 0.0024 0.21 13.0 2.9 3 23 329 349 328 349 0.98 8 19 0.0069 0.61 11.6 1.3 1 23 355 378 355 378 0.96 9 19 0.0016 0.14 13.6 0.3 1 23 384 406 384 406 0.97 10 19 0.36 32 6.2 5.1 1 23 412 435 412 435 0.96 11 19 0.013 1.1 10.7 0.4 1 23 441 463 441 463 0.97 12 19 0.014 1.2 10.6 1.2 1 23 469 492 469 492 0.96 13 19 0.18 16 7.1 1.5 1 23 498 520 498 520 0.97 14 19 0.0042 0.37 12.3 5.1 1 23 526 548 526 548 0.96 15 19 0.76 68 5.1 1.9 2 23 555 577 554 577 0.90 16 19 0.0085 0.76 11.3 4.1 1 23 583 605 583 605 0.99 17 19 0.039 3.4 9.2 4.4 2 23 612 634 611 634 0.95 18 19 0.15 13 7.4 0.0 1 23 640 662 640 662 0.95 19 19 0.025 2.2 9.8 4.9 1 23 668 690 668 690 0.95
Sequence Information
- Coding Sequence
- ATGGAGCTGGATCCCCTGGCCTTGGTGAAAGAGGAGGGAGATTGTACGGACACTGTGGTTAAGGAGGAACCAAGGGATGAGTTTGTACCAGTGGCTGCTAACACGACTGAGTGTGAAGTAACGGAACAGTTCTTAGAGCCGGCCGCTTCTATCCCGGATCAAGGAATAGAACAGAACTGGTTCCTCATACTGAAACAGGAAGAACTAGTCATCAAGGATGAATGTGCGTTCGAGACGGAGGAGTTGGACGAGATTGCTTTCGTAGCAGTTAAAGAAGAACTAGCCAAAGACTTTTCATATGAAGATGGCAGCACGGGTACTGGGCTGTGCTCGGTCACTACGAGTCTGGGCAACGCGATCACCTCCGACAGTATCGTTAACGCTCGTGACAAGAGCAATACTTGCGGCTACGAGACATCCAGCCACATGAAACACCACACGTTGAGTGTCTCGGAACAACCTCCGTTCAAGTGTGACGATTGCAGCTTCAACTGCAACGACAAGTCTCGTCTAACACAACACGTCAAGACCGTACATCTGAAACGCAAGACGTACGACTGCACGCAATGCGATTTCACCTCGGCTCACGGCAACAACCTCAAGCGCCACCTGTCGACGCACGCGGGCGACCAACCCTTCACGTGCGACGAGTGCGACTTCAAGTGTCGACGAGAATCCCGTCTCAAACATCACGTCAAAACCGTACATCGCAAAGACAAGACGTTCGCTTGTACGCAATGTACTTACACTTGTGCTTTCGGCTATTACCTCAAACGTCACATGTTGACGCATTCAACAGATAAACCCTTCAATTGTCCGGAGTGCAAATACAAATCCCGAGATCGATGCCGTCTCACGAAACATCTGAAAGCCGTACATCGTAAAGAAAAACCTTTCATCTGTACTCACTGCGATTTCTCGTCTGCGTACGCGTGCGACTTAAAGCGGCACCTGTTGACACATCGCAAGGAGAAACATCGCGCGTGCTCGCTGTGCAGTTACACGTGCAAGAAGAACGCTAATATGGTGAGACACTTACGTACCCACTCCGGTGAACGACCTTTCAAATGTACCGAATGTTCGTCCAGCTACAGAGAGAAAGGTGTCTTGACGCATCATATAAAAGCCGTACATCGTAGAGAGAAACCTTTCATCTGTACGCGATGCGATTACGCGTCCGCGTTCGCTTCGTACCTCAAGCGACACGTGTTAATGCACGACGTGGAGAAAACCTATGAGTGTGCACAATGTAAATACAAGTGTCGAGAGAAGTTTTGTCTGTCGCAACATATCAAAGCGGTACATCTGAAACAGAAACCGTTTGCGTGTACGCTATGCGAGTTTTCCACGGCTGGCGGCAAGAGCTTGAAACGTCACATGATGTCGCATACGGGCGATAAACCGTTTCGATGCGGCGATTGCAATTTCACGGCCATCGAGAAATGCAGTCTGACGAAACATATCAAGGCGGTACATCTGAAAGAAAAGCCGTTTGCGTGTAACCGATGTGATTATTTGTCGTCCACTTCGGGCGGACTGAGATGTCACATGTTGACCCACGACGCGGTGAAACCCCACGCGTGTCCGTTGTGCAGTTATACGTGCATACGTAATACCCACATGGTTAGACACATACAAACACATAGCGGCGCGAAACTCTTGCAATGTATCCAGTGTAGCTTCAAGACAACCGGCAGGAATAATCTAACGAAACACGTCAAGAAAACACATCCCAACGAGAAGATTTATAAATGCGAGCGATGCGAGTTCGTTTCGTCGAACTGTAGAAGCTTGAAGCAACATCTGTCGACTCACGCGGCGGAACAAACTATCCGTTGCGGCGAATGTAGCTACGAGTGCACGAAGAGAATTCATCTGAGACATCATATCAAAGCGGTGCACTTGAGAGTTGGAGCGTTCACGTGCACGCGATGCGAGTTTGCTTCGGATAGCGCCGGCGGCTTGGAGAGACACGCGTTAGCGCACGTGGCGGTCAGACCTCACGCGTGTTCGTTGTGTAGTTACACGTGCACGCGAGCGAGTCATATGCGGGCACACGAGGTCACGCATGCCGGGGACAGTGTGGCGTGA
- Protein Sequence
- MELDPLALVKEEGDCTDTVVKEEPRDEFVPVAANTTECEVTEQFLEPAASIPDQGIEQNWFLILKQEELVIKDECAFETEELDEIAFVAVKEELAKDFSYEDGSTGTGLCSVTTSLGNAITSDSIVNARDKSNTCGYETSSHMKHHTLSVSEQPPFKCDDCSFNCNDKSRLTQHVKTVHLKRKTYDCTQCDFTSAHGNNLKRHLSTHAGDQPFTCDECDFKCRRESRLKHHVKTVHRKDKTFACTQCTYTCAFGYYLKRHMLTHSTDKPFNCPECKYKSRDRCRLTKHLKAVHRKEKPFICTHCDFSSAYACDLKRHLLTHRKEKHRACSLCSYTCKKNANMVRHLRTHSGERPFKCTECSSSYREKGVLTHHIKAVHRREKPFICTRCDYASAFASYLKRHVLMHDVEKTYECAQCKYKCREKFCLSQHIKAVHLKQKPFACTLCEFSTAGGKSLKRHMMSHTGDKPFRCGDCNFTAIEKCSLTKHIKAVHLKEKPFACNRCDYLSSTSGGLRCHMLTHDAVKPHACPLCSYTCIRNTHMVRHIQTHSGAKLLQCIQCSFKTTGRNNLTKHVKKTHPNEKIYKCERCEFVSSNCRSLKQHLSTHAAEQTIRCGECSYECTKRIHLRHHIKAVHLRVGAFTCTRCEFASDSAGGLERHALAHVAVRPHACSLCSYTCTRASHMRAHEVTHAGDSVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00242545;
- 90% Identity
- iTF_00242545;
- 80% Identity
- -