Basic Information

Insect: Brachyptera putata
Gene Symbol: znf143
Assembly: GCA_907164805.1
Location: OU015463.1:22546872-22567037[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 6e-05 0.0053 18.1 1.2 3 23 338 360 336 360 0.95

2 7 0.0054 0.48 11.9 0.2 1 23 366 390 366 390 0.96

3 7 4.4e-08 3.9e-06 27.9 0.6 1 23 396 420 396 420 0.99

4 7 0.00066 0.058 14.8 1.1 1 23 426 450 426 450 0.97

5 7 2.4e-05 0.0021 19.3 0.1 1 23 456 480 456 480 0.95

6 7 0.00089 0.079 14.4 1.8 1 23 486 510 486 510 0.96

7 7 3.6e-05 0.0032 18.8 1.8 1 23 516 539 516 539 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	6e-05	0.0053	18.1	1.2	3	23	338	360	336	360	0.95
2	7	0.0054	0.48	11.9	0.2	1	23	366	390	366	390	0.96
3	7	4.4e-08	3.9e-06	27.9	0.6	1	23	396	420	396	420	0.99
4	7	0.00066	0.058	14.8	1.1	1	23	426	450	426	450	0.97
5	7	2.4e-05	0.0021	19.3	0.1	1	23	456	480	456	480	0.95
6	7	0.00089	0.079	14.4	1.8	1	23	486	510	486	510	0.96
7	7	3.6e-05	0.0032	18.8	1.8	1	23	516	539	516	539	0.98

Sequence Information

Coding Sequence: ATGTCACACTATTCTGATCGACCTTCACTGCTGGCGGACTATGGAAGCTCGGTATTGGTGAATACGGATGGTACAATCGTTAGTTTCAATCCGACTGATGACAGCTTTAAAGAAGGCTCGACATCAGAGTATGACAATTACGACTGCTTAGTTGTGGCAGACGAAGAGCATACAGACCAACTAAAATTAGCCCCAGCTGAATTTGATGCTACAAATTTGACAGCTGTGACCTTATCTGACGGGTCACAAGCATTTGTCAATACAAATGATCTTAATCTTGACCAAGATAATGCAGTCCAACTTGAAGATGGAAGTACACTTTTGATACAAGACTACCCGCAGTTGACAGATGGTCAACAAATTCAGCTTGGAGATGGACGAGTTGCGATATTGCATTCTACAACTGAACAGACTGAGGGTTTTCAGCCTGTGGAATTGGAGGATGGTACAACTATGTTCATTGCTCTCTCCGATCTAATGGGAGAACCATTGGATCCAAGCACATTCGTTATCTGTGAGAACTCGTCCGCAGTCGCCCCCGACACTCAAAATATAGATGAATCTCTAGAAATGGAAGATATGGAGAGCATCGAGAATGAGACGTCGCAAACGTATTCTGCGTCTCCTGGTAAAACCGAGTATCAGTCAGATGAAGACGAGCCGATGATCAGCCTTGAATACAGTGCGTCGTGTGCCAAGGAACACAGCATGAGTTTCGGTAGTATAGAGGAAGAGAATGCCATCACCAGAATGCCATCCGAGTCTAGTCTGCATAGCACACCATCCACATATTTCCCAGATGGCTATCATTCGCTGGAGTTTGACAGTGGGGCCATCTGCTTTGCCGTCCCAGAAATGGGTGATGAATCAAAATCAGAATCTGAGAACAGTTCTGGTTTCCACTCTCATGAGAAGAGCTTAGAAGTGAGTGATGAGAAATGCAGTCCCGTCGACAAACAATTGGACGAGACGGGCGAATTGTGCGTGCGAGATCGAACTAAAAGTATAATGTGTCCGGAAGAAGGCTGTGGCAAATATTATACAACTTTGCACCATTTGAAGGTCCATCAACGCGCCCACACTGGTGACCGGCCGTTTGCGTGCACCGTTGAGGGCTGCACCAAGGCCTTCTCGACGGGCTACGGGCGGAAGGCGCACGTTCGGACGCACACGGGTGAGAAGCCTTACAAGTGCCCCGAAGGTAGCTGTGATAAGAGCTTCAAGACTTCGGGAGATCTCCAGAAACATATACGTACACACACGGGCGAGCGTCCTTTCCGTTGCCCGAAACCAGACTGCGGACGATCGTTCACGACGTCCAACATTAGAAAAGTGCATTACCGAACGCACACCGGCGAGAGACCGTACCTGTGCCCCGAAGCGGGCTGTGGACGGGCATTCGCGTCGGCTACCAACTTCAAGAATCACACTCGTATACATTCCGGAGAAAAACCGTACATTTGTACAATCGAGGGGTGTAGCAAAAGGTTCACAGAGTATTCTTCCCTGTACAAACACCACATGGTACACACCCAACAGAAGCCTTACCATTGCGCTATCTGTGATCGCAATTATCGCCAAGCGTCCACGCTGACCATGCACAAACGTACCGCGCACGGTATCGTGGAGGCAGATGACGGCACGGAAATCATACTCGGTGAAACGGTGTTCGCGTTTGCGGATGCAGCATCAGGCGGCAAGCGACTTAAAGCACTCGGCTCCAACTTCCTGGGCTATAATAAGAAAGGTGGTAGCAAGATACTCACCGTGCAAGCAACGGAAGGAAGTAATCCAGAAATTGCAGGCCAACAGTTTCTGGTGCTTGCAAACCCTGCTCAGATAGCAGCACTGGAGCATTTGGGTGTGTCCACTGCTCATGCTCAGTTGGAGGATGATTCCGACGGCCTGGAAGATAACGACGAAATAATCCTGTCCAGTATACGTGAATAA
Protein Sequence: MSHYSDRPSLLADYGSSVLVNTDGTIVSFNPTDDSFKEGSTSEYDNYDCLVVADEEHTDQLKLAPAEFDATNLTAVTLSDGSQAFVNTNDLNLDQDNAVQLEDGSTLLIQDYPQLTDGQQIQLGDGRVAILHSTTEQTEGFQPVELEDGTTMFIALSDLMGEPLDPSTFVICENSSAVAPDTQNIDESLEMEDMESIENETSQTYSASPGKTEYQSDEDEPMISLEYSASCAKEHSMSFGSIEEENAITRMPSESSLHSTPSTYFPDGYHSLEFDSGAICFAVPEMGDESKSESENSSGFHSHEKSLEVSDEKCSPVDKQLDETGELCVRDRTKSIMCPEEGCGKYYTTLHHLKVHQRAHTGDRPFACTVEGCTKAFSTGYGRKAHVRTHTGEKPYKCPEGSCDKSFKTSGDLQKHIRTHTGERPFRCPKPDCGRSFTTSNIRKVHYRTHTGERPYLCPEAGCGRAFASATNFKNHTRIHSGEKPYICTIEGCSKRFTEYSSLYKHHMVHTQQKPYHCAICDRNYRQASTLTMHKRTAHGIVEADDGTEIILGETVFAFADAASGGKRLKALGSNFLGYNKKGGSKILTVQATEGSNPEIAGQQFLVLANPAQIAALEHLGVSTAHAQLEDDSDGLEDNDEIILSSIRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -