Basic Information

Insect: Brachyptera putata
Gene Symbol: -
Assembly: GCA_907164805.1
Location: OU015474.1:9313243-9319180[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0046 0.4 12.1 3.0 1 23 249 271 249 271 0.98

2 18 0.01 0.9 11.0 2.4 1 23 277 299 277 299 0.96

3 18 0.091 8 8.1 0.3 1 23 305 327 305 327 0.98

4 18 2.6e-06 0.00023 22.4 1.0 1 23 333 355 333 355 0.98

5 18 0.14 12 7.5 3.2 1 23 361 383 361 383 0.98

6 18 0.0014 0.12 13.8 3.7 1 23 389 411 389 411 0.96

7 18 0.027 2.4 9.7 8.9 1 23 416 438 416 438 0.99

8 18 0.37 33 6.1 0.8 2 23 452 474 451 474 0.92

9 18 0.1 9.1 7.9 13.5 1 23 529 551 529 551 0.99

10 18 0.00018 0.016 16.5 3.3 1 23 557 579 557 579 0.96

11 18 0.00014 0.012 16.9 7.9 1 23 585 607 585 607 0.98

12 18 0.066 5.9 8.5 2.7 1 23 626 650 626 650 0.97

13 18 0.0041 0.36 12.3 3.9 1 23 656 678 656 678 0.96

14 18 0.00027 0.024 16.0 10.6 1 23 683 705 683 705 0.99

15 18 0.88 78 5.0 0.8 2 23 719 741 718 741 0.89

16 18 0.001 0.091 14.2 2.6 1 23 754 776 754 776 0.98

17 18 7.1e-05 0.0063 17.8 2.6 1 23 782 804 782 804 0.98

18 18 0.02 1.7 10.2 11.8 1 23 810 832 810 833 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0046	0.4	12.1	3.0	1	23	249	271	249	271	0.98
2	18	0.01	0.9	11.0	2.4	1	23	277	299	277	299	0.96
3	18	0.091	8	8.1	0.3	1	23	305	327	305	327	0.98
4	18	2.6e-06	0.00023	22.4	1.0	1	23	333	355	333	355	0.98
5	18	0.14	12	7.5	3.2	1	23	361	383	361	383	0.98
6	18	0.0014	0.12	13.8	3.7	1	23	389	411	389	411	0.96
7	18	0.027	2.4	9.7	8.9	1	23	416	438	416	438	0.99
8	18	0.37	33	6.1	0.8	2	23	452	474	451	474	0.92
9	18	0.1	9.1	7.9	13.5	1	23	529	551	529	551	0.99
10	18	0.00018	0.016	16.5	3.3	1	23	557	579	557	579	0.96
11	18	0.00014	0.012	16.9	7.9	1	23	585	607	585	607	0.98
12	18	0.066	5.9	8.5	2.7	1	23	626	650	626	650	0.97
13	18	0.0041	0.36	12.3	3.9	1	23	656	678	656	678	0.96
14	18	0.00027	0.024	16.0	10.6	1	23	683	705	683	705	0.99
15	18	0.88	78	5.0	0.8	2	23	719	741	718	741	0.89
16	18	0.001	0.091	14.2	2.6	1	23	754	776	754	776	0.98
17	18	7.1e-05	0.0063	17.8	2.6	1	23	782	804	782	804	0.98
18	18	0.02	1.7	10.2	11.8	1	23	810	832	810	833	0.96

Sequence Information

Coding Sequence: ATGGTAAAATCTTGTGTTGTTTCTGGCTGTAAATATCGTTTCAAGAAGAACAACAGTATTTCCTTACACAGCTTTCCAAAGAATGACCTAATGAGACAACAGTGGCTCAAAGCAATCCGTTGTGGTGATGATTACAATTGGAAATATCATCACGCGCTATGCTCTCAACACTTCGAGCCGGCATCATTTGATCGTACGGGTCAGACAGTTCGTCTTCGAGAAAATGTTGTACCATCCATTTTCAACTTTCCAGATCATGATTTAAAGAACGTCACGACGATGTGCACCTCCATCGAAGCTAGAGAACAGGATATACCGGGCGTCCTTACTTCCTTACAGGCAGAAGTGGAAATCAAGGAGGAACCGATACCAGAGTCGGAAGAAATGATGGATTTCGATTTCGTAGGGGTGACGGAGGAGCCATATCAGATAATCAAGGAGGAATACGAACTTGATTCGGAAGAAATGAATGATTTTGATTTCGTCGAGTCGATCGAAAAACCTCGTGAAGAATTTTTGCACGAAGATGGCACTACTGGAGTTGACGAGAGCTCCGAGTTATATTCGCCTGTAGAAAGCGTCAAGAGTGAGATGGGCGTGATTTCCAGCGAGTTACCAACACGATCTCTCAAAATACCAACCGAACAAAGTGTACCAAGCTACCAGACTGTGTCAGATACTCACGAAGTTACGTCACCGTCAACTCTAACGAATCGCGTCCTCACTGCTGCCGACTATCTTCCATTCGAGTGCGACATTTGCTTAGAAAGATATCCGCATATAGATCATCTAAAGCGTCACAAGTTGAAACATACCGCTACAAAGTCGTTCCAGTGCCAGCAATGTTCATATCGGTGTATCGATAAAGACGACCTACAACTCCATTCAACAATACACATGGATAAACATCTGTTTGAATGCCTGCAATGTTCATACAAGTCTCCGAACAAAGTCGATATAGAAACGCACTTGTTAACTCATAGCGGTGACCAATCTTACGAGTGCGACATTTGTACGACCAAGTTTCGAATGAAAAATAATCTGATTCGCCACATGCAGATCCATACTAGCGATCTACCGTTTAAATGTAGTATTTGTTCATATCGGTGTTGGCTCGAATATAGTTTGAAACGTCACGTTATGACGCATACCAATGAACTGCCTTTCGATTGCACGCAATGCACGTTCAAGTTTCGACAGAAATGTGATCTCGAACGTCACGTTTTGATACATGGTGATCTACAGTTTAAATGCAGTGTGTGTGGCTATCAGTGTCGGTGGAAAACTCATCTGAAACACCACATGAAAAGTCATCGAGCGTTGATAAACGGATCTGCTGATAAACAGTCGTTGGAATGTAACGAGTGTAGTTTTGACTGTCGACTGAAAAGTGATTTAGACAGTCACGTACAGGACGTACACAGAAAAGAGAATCTAACTGAAACCGATGAGCTATCATTGAAATGTAATGTATGCTTGTATAAGTGCCAACATGTAAACGAATTGAATTGCCATTTATTAACACATGGGCCTGATGAACGACCAGTTGAACGCAATATCGGAACCGAAACCGACGATCTACCGTACAAATGCACCGTGTGCGCGCATCAGTGTCGACACAAACATCATTTGAAACGTCACTTAATGACACACACAGATAAACGCCCATTCGATTGTAAGGTGTGTACGAACAAATTTCGACATAAATCCGATCTCGAATCTCACATGCTCCAACATACCGGTGATTACCCGTATAATTGTAGCGTTTGTGTGTATCGGTGTCGCCAGAAATATCATCTCAAACGTCACATGCGAACGCACGAAGAAAAACAATCGGGAGAACGCAAAAACCGAACTGAAATCGAAAAGTTACCGTACAAGTGCAGCGTACCGTCGTGTGTGTATCGATGCGCTTATAAACATCTTCTGAAAATTCACATGATGATACATACGAATGAACGGCCTTTCGATTGCACGAGTTGCACGTTCAAGTTTCGACGGAAATGTGATCTCGAACGTCACGTTTTGATACATGGTGATCTACAGTTTAAATGCAGTGTTTGTGGTTATCAGTGTCGGCGGAAAACTCATCTGAAACATCACATGAAACGTCATCAAACATTGACAAACGCGTCTTCTGATATACGGTCGTTGGAATGCAACGAGTGTAGTTTCAATTGTAACCTAAAAAGTGATCTAGACAGTCACGTTGTGAACGTACACAGAAAAGAGAATCTAACCAAAACCGATGAGCTACCATTTAAATGCAATATATGCTCGTATCAGTCCCGCCAGAATTATTATCTGAAACTTCATATGGTGAAACATACCGATAAACGGCCCTTCGAATGTGCGGAGTGTTCACAAACGTTTCGACGGAAGTGTGACGTCAAACGTCACATGTTGGTACATAGCGGTGATCTACCGTTTAAATGCGATGTTTGTGATTATCATTGTCGACAGAAACATCAGCTGCAGCGTCATTTTTTGAAACATCATTCCTTGAAAGAAGTCGGCTTGACATGA
Protein Sequence: MVKSCVVSGCKYRFKKNNSISLHSFPKNDLMRQQWLKAIRCGDDYNWKYHHALCSQHFEPASFDRTGQTVRLRENVVPSIFNFPDHDLKNVTTMCTSIEAREQDIPGVLTSLQAEVEIKEEPIPESEEMMDFDFVGVTEEPYQIIKEEYELDSEEMNDFDFVESIEKPREEFLHEDGTTGVDESSELYSPVESVKSEMGVISSELPTRSLKIPTEQSVPSYQTVSDTHEVTSPSTLTNRVLTAADYLPFECDICLERYPHIDHLKRHKLKHTATKSFQCQQCSYRCIDKDDLQLHSTIHMDKHLFECLQCSYKSPNKVDIETHLLTHSGDQSYECDICTTKFRMKNNLIRHMQIHTSDLPFKCSICSYRCWLEYSLKRHVMTHTNELPFDCTQCTFKFRQKCDLERHVLIHGDLQFKCSVCGYQCRWKTHLKHHMKSHRALINGSADKQSLECNECSFDCRLKSDLDSHVQDVHRKENLTETDELSLKCNVCLYKCQHVNELNCHLLTHGPDERPVERNIGTETDDLPYKCTVCAHQCRHKHHLKRHLMTHTDKRPFDCKVCTNKFRHKSDLESHMLQHTGDYPYNCSVCVYRCRQKYHLKRHMRTHEEKQSGERKNRTEIEKLPYKCSVPSCVYRCAYKHLLKIHMMIHTNERPFDCTSCTFKFRRKCDLERHVLIHGDLQFKCSVCGYQCRRKTHLKHHMKRHQTLTNASSDIRSLECNECSFNCNLKSDLDSHVVNVHRKENLTKTDELPFKCNICSYQSRQNYYLKLHMVKHTDKRPFECAECSQTFRRKCDVKRHMLVHSGDLPFKCDVCDYHCRQKHQLQRHFLKHHSLKEVGLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00242248;
90% Identity: iTF_00242248;
80% Identity: iTF_00242248;