Basic Information

Insect: Brachyptera putata
Gene Symbol: -
Assembly: GCA_907164805.1
Location: OU015472.1:14606580-14613268[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00016 0.014 16.7 2.1 1 23 172 194 172 194 0.97

2 9 0.0091 0.8 11.2 1.0 1 23 200 223 200 223 0.94

3 9 0.00085 0.076 14.4 0.2 3 23 382 402 380 402 0.96

4 9 0.0012 0.11 14.0 0.1 1 23 408 430 408 430 0.95

5 9 4.4e-06 0.00039 21.6 2.3 1 20 436 455 436 458 0.93

6 9 0.00063 0.056 14.9 4.2 1 23 464 486 464 486 0.96

7 9 0.00039 0.034 15.5 0.4 1 23 492 514 492 514 0.99

8 9 6.6e-08 5.9e-06 27.4 0.2 1 23 520 542 520 542 0.99

9 9 0.0049 0.43 12.1 1.2 1 23 550 573 550 573 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00016	0.014	16.7	2.1	1	23	172	194	172	194	0.97
2	9	0.0091	0.8	11.2	1.0	1	23	200	223	200	223	0.94
3	9	0.00085	0.076	14.4	0.2	3	23	382	402	380	402	0.96
4	9	0.0012	0.11	14.0	0.1	1	23	408	430	408	430	0.95
5	9	4.4e-06	0.00039	21.6	2.3	1	20	436	455	436	458	0.93
6	9	0.00063	0.056	14.9	4.2	1	23	464	486	464	486	0.96
7	9	0.00039	0.034	15.5	0.4	1	23	492	514	492	514	0.99
8	9	6.6e-08	5.9e-06	27.4	0.2	1	23	520	542	520	542	0.99
9	9	0.0049	0.43	12.1	1.2	1	23	550	573	550	573	0.95

Sequence Information

Coding Sequence: ATGACTGACTTGGACAGTGAGAAGCAGCTCGGCTTGAACTGCTTCCTCTGCAATGCCGGAATCGCTTCGGACTCGAGTTACAGTATTTATTACACTGTAATGCCACACAGTGGAACACTCCTCATGAATGCAATTCAGAAACTAATTCGCAAGAATCTTGATCAGTATTTACTATCCAGCTCGTTTCTTTGCACAAAGTGTTTCTCATTTTTCGAGCAGTTGGATTCATCAGAGGAGAGATGCAAAGGTTTACGAAGTGATATCATGAAAGTATTTGTAGGAAACTTTAAAAATAGGGGTTTTGAAAATAATGTTGTCCCTGGTGTGGCGTGCCAGACTGATAATGTAATAGTTGAAAACGTTTGTGGCAACTTGAACACGAGTTCCGAATCTCCCAAACCCGACGAGAGTGCAACAAGTATGGAGCCTGAAGTTAGTTTAACTGTGTTGAAGGAGAATGCAACTATAAACAAGAAAATACTGCGTAGTGCTCGAAGTCTACACCGTTACGTACATCCGTGTACCATTTGTGGCCGCCTTTTTCGTCGTCCTTGTGAAGTGAACCAGCATATGCTCTCACATGACGGAGCCAAGCCTTACAAGTGCGGCCATTGTAGCCGGCGATTTGGGTCCAAGTCAGGTGCAGCAATCCATGCTCTGAAGAAACATGGTGTCGATAATGCGGAGGCAATCATTGTCGAGCCAAAACAGGAATTAACTCCAAGTGAAAACGTTACGGCAGATGATCAGGTTGAACCCGAAGAAGATCTTTTTCCAGAATCTCAAGATGACGTAGATACTAAAAATCTCAAGAGAGCTTCAAGCTCATCAGAGAGTGATGATGATATTAAGAATGAAGATTTTGACTGGAAGAACAATGCTGATAATGATGATAATTTTGAATCGGATGATAACTGGGACAGCAACTCGGTGCCTGACGACGTAGCCACAGTGAATTTGAAAAACGTGAAAGATACGAGCCCGAAGGTAAAAAAGAGTCCTCAAGTGAGAGGTCGACCGAAAGGATCGAGAAAAGTGCCAGCCGCAAAACTCAAAACAAGAAAAAGAAACTCGGACGAAGGCGTTGAAAAATCTAATAAAACCCGTCCAAAGAAAATTCCCGGTGAACAGATTCGTTTGGACTGCTCAATATGCGGCAAGCAGTGGCGCACGCGTTCCGAGCTGAAGGCGCATGAGGCGACGCACAGCACCGAAAGGCCATTCATCTGCGAGATCTGCGGCCAGGCGTACAAGCACAAGCCGGCCCTGGACGTTCACGTGGGCATGCACCAGGGCATCAACCCGTTCTGTTGCCCCTACTGCAAGAAGTCGTTCACGCAGAAGGGGGCCCTACAGAGGCACCTGCCCATTCACACGGGCGACGCTCCCTTCCAGTGCGAATTGTGCGGCAAGCGCTTCGTGCACCACACCAGCTTCAACATGCACACGCTGGCGCACACGGGCGAGAAGAGCTACAAGTGCGGCGTGTGCGGGCTGGCGCTGCTGTCGGCGTCGCACCTCAAGCGCCACACTCGGGTCCACACGGGCGAGCGCCCCTACCAGTGTCCAACGTGCGGCAAGCGCTTCGCAGAGCGCTACAACCTGGCGGCGCACCAGCGCATCCATCAGCACTCCGCCTCAAAGCTTCACAGTTGTCAGTTGTGCGGCGCCGGATTCGACCGGAAGCCCAAGCTGGAGGACCACCTGGCCTCCTGCCACAACAAGATCTCCGACAACCACAAGATGCTGCTAGACGAGTCGCGGAAGTGGCTCGGACATCCGCACCAGATGCCCGGCGAGATGAACCAGTCGTGGCACCTCCTCGACCCCAACAACCTGCTGCCGCCCAGAATGAACATGATGCAGTGA
Protein Sequence: MTDLDSEKQLGLNCFLCNAGIASDSSYSIYYTVMPHSGTLLMNAIQKLIRKNLDQYLLSSSFLCTKCFSFFEQLDSSEERCKGLRSDIMKVFVGNFKNRGFENNVVPGVACQTDNVIVENVCGNLNTSSESPKPDESATSMEPEVSLTVLKENATINKKILRSARSLHRYVHPCTICGRLFRRPCEVNQHMLSHDGAKPYKCGHCSRRFGSKSGAAIHALKKHGVDNAEAIIVEPKQELTPSENVTADDQVEPEEDLFPESQDDVDTKNLKRASSSSESDDDIKNEDFDWKNNADNDDNFESDDNWDSNSVPDDVATVNLKNVKDTSPKVKKSPQVRGRPKGSRKVPAAKLKTRKRNSDEGVEKSNKTRPKKIPGEQIRLDCSICGKQWRTRSELKAHEATHSTERPFICEICGQAYKHKPALDVHVGMHQGINPFCCPYCKKSFTQKGALQRHLPIHTGDAPFQCELCGKRFVHHTSFNMHTLAHTGEKSYKCGVCGLALLSASHLKRHTRVHTGERPYQCPTCGKRFAERYNLAAHQRIHQHSASKLHSCQLCGAGFDRKPKLEDHLASCHNKISDNHKMLLDESRKWLGHPHQMPGEMNQSWHLLDPNNLLPPRMNMMQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -