Basic Information

Insect: Brachyptera putata
Gene Symbol: salm
Assembly: GCA_907164805.1
Location: OU015465.1:16835712-16848667[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 9 7.9e+02 1.8 0.1 2 21 65 84 65 85 0.89

2 10 7.8e-06 0.00069 20.9 0.9 1 23 377 399 377 399 0.98

3 10 1.5e-05 0.0014 19.9 2.1 1 23 405 427 405 427 0.98

4 10 0.097 8.6 8.0 3.8 2 23 757 778 756 778 0.98

5 10 9.4e-08 8.3e-06 26.9 0.6 1 23 784 806 784 806 0.97

6 10 9.3e-05 0.0083 17.5 2.6 1 23 816 838 816 838 0.98

7 10 0.015 1.3 10.5 2.4 2 23 1104 1125 1103 1125 0.97

8 10 0.15 14 7.3 0.9 1 15 1131 1145 1131 1145 0.93

9 10 2.1e-06 0.00019 22.6 4.0 3 23 1324 1344 1322 1344 0.96

10 10 3.1e-07 2.7e-05 25.3 0.9 1 23 1350 1372 1350 1372 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	9	7.9e+02	1.8	0.1	2	21	65	84	65	85	0.89
2	10	7.8e-06	0.00069	20.9	0.9	1	23	377	399	377	399	0.98
3	10	1.5e-05	0.0014	19.9	2.1	1	23	405	427	405	427	0.98
4	10	0.097	8.6	8.0	3.8	2	23	757	778	756	778	0.98
5	10	9.4e-08	8.3e-06	26.9	0.6	1	23	784	806	784	806	0.97
6	10	9.3e-05	0.0083	17.5	2.6	1	23	816	838	816	838	0.98
7	10	0.015	1.3	10.5	2.4	2	23	1104	1125	1103	1125	0.97
8	10	0.15	14	7.3	0.9	1	15	1131	1145	1131	1145	0.93
9	10	2.1e-06	0.00019	22.6	4.0	3	23	1324	1344	1322	1344	0.96
10	10	3.1e-07	2.7e-05	25.3	0.9	1	23	1350	1372	1350	1372	0.98

Sequence Information

Coding Sequence: ATGAGCAGTAGAGAAGTTGCTATTTCTGTCAGAAGAATCTCTGAGTCGACAAACGTGGTACCATCCACCCAAGCAGCCGGCAAAAACAAAGACAGACAAATGAGGCGCGAGGTGTCGAGTTTCAGCGCGGAAATTGACGCCACCATCGAAGATGCTGAAGGAGACGACACTCATAAATCTGCAGAAGAGCGCGTGTGTCGTCACTGCAACGCGGAGTTCCCTGAACTTCCAGACTTCTACGCGCACAAGAAGGAGTGCGATCGTAAGGCAATGTTGCTCGGTATTGGCGAAGAACCGTCGTCAGGTGCCGAGGAGATGGAAGAGGAGGAGGAGGACGAGGAGAGCAATTCAGTGGCAGAAGAAGGAGTCAAGAGGTTAGAGGAAGTGCAACGGCAACGTCAAGACGCTGAGAACAATAATCGTGGGGAGGGAGGAGATGTAGAAGTTGACGGTGAATTACAAGACGGCGAAGGGTTTCCGTTTCCTGCTCCTGCCGTACCTGCGCCGGCAAGTCACGTTACATTAGAAGCCCTTCAAAATACTAAAGTAGCCGTTGCGCAGTTTGCAGCCACCACCATGGCCAACAACGGGGACAACGCAGCAGCATTACAAGAGTTAGCAGTATTACAGTCAACTTTGTTCACATTGCAACATCAGCAAGTGATGCAGTTGTCATTAATTCAACAACTGCAAAGCCAATTATCAATAACATTACCTAAGGATGATGATTCTCTGGCGCCTTCCCCACCCCCAGTTCCTGTTACCCCTACGATACCAATCCCACCTCAATCAACAACGCCAAAGTCATCGCAGACACCGATACCGCCACACATATCCTCAGCATCGTCATCCCCACCAGCACAGACTTACATGAACTCCCTCCAGTCCATGTGCTCCATCTCATCTACTCTGGCGGACACAATCATCACCAACAATGACCCGATGCCACTAAACGAGCCGAACACGCTCGATATGCTACAAAAGAGAGCTCAAGAAGTTCTCGATAACGCCAGTCAAGGCTTACTCGCTAACAACTTAGCTGATGAACTCGCGTTCCGGAAAAGTGGATGCAAGTCTCTATCGCCGTACGACTCAAAGACGGGAGGTCGAAACGAGCCCTTCTTTAAGCACCGTTGTCGCTACTGTGGGAAGGTGTTTGGCAGCGACTCCGCCCTCCAGATACATATCCGGTCACATACAGGTGAGCGGCCCTTTAAGTGCAATGTCTGTGGCAGTCGGTTCACAACTAAGGGCAACCTCAAAGTCCATTTCCAAAGACATACTTCCAAGTTCCCACACATCAAGATGAATCCTAACCCTGTACCCGAACATTTGGACAAGTATCACCCTCCTCTTCTCGCTCAAATGGGACAAAGTTTATCACCTGGACATTCCCCACACCCACATCATCCACACTCACATCATCCACCACCACCTCATCCCCATCATCCTTTCCATTCGAGTTCAAGTTTCCCCCAGACGTCCATACCTCTTTATCGACCTCCACAGCCTCAGGATCTCATGCCTCATCATCAGCAACCTCCACCACTGCATCAGCTCGATTCTGGAAAACCAATGTTACCCGGACACCCGATGTTCAGTCCCCGAGCAGAACAAGATATGCCAGAGAATTTAAGCAAACCTCAGTCATCACATTCCTCTCCGCCTCCTCCCTCGGAGCACAGCGACTTATACAAGAAAGAACCACTTGACGACGAGCAACATCACTCAGATGACGGCGGACGACTATCTCCCAAGCACGAGGTGGACACGGACCACGAGCCTGACGAGGACCACGATATGGAGGAAGGCTGCTATGACCCGTCTCCGTACGACGACTGCAGTTTAGACAGTAAGTACAGTGACGAAGATATGCTGATGGGGGAACCAGATAGTCCCCTTATGGACAAGAATGAAGATAGTCTGCAAGAGCAACCTGAAAACCTATCTAGCAAAAGTACATCTGCCGTAAGGCAATCCATTGAACAGCGTCTACCTCCTTCATTCCCTTTCCCTTCACACGCTGTCTCCCCTCCGAGCAGTACTTCCTCGGGAAGCGCTAATAACACCCCAAATCCAGGTGCACACATTCCTTTTAACAATGATTTAGATCCTTCTAAAGATCCGGCTATCTATACGAACCTACTGCCACGGCCGGGTAGCAATGATAACTCGTGGGAGAGCCTTATTGAAGTGACCAAAACTTCAGAAACGTATAAGCTACAACAGTTAGTTGACAACATCGAGAATAAATTGACCGATCCAAACCAGTGTGTCATTTGTCATCGTGTTCTGTCTTGTAAAAGTGCTTTGCAAATGCACTATCGTACTCACACAGGCGAGCGGCCATTTCGTTGCAAGATTTGCGGTCGTGCCTTTACGACCAAAGGCAATCTGAAGACTCATATGGGCGTGCACCGTGCTAAACCACCGATGAGAGTACTTCATCAGTGTCCAGTATGCCACAAGAAGTTTACAAATGCTCTAGTCCTGCAGCAGCATATACGATTACATACCGGTGAACCTACTGATCTCACCCCTGAACAAATTCAAGCAGCAGAAATTAAAGAATATCCTCATTCCCCATTCTCACTTCCAAATTCCATGAATCCTTTCCTAGCTCAAGGTTTCCATATCCCTGGCATGCCACTTCCACCTCATGGACTCCATCTTGGTCCAGAATATGATGACAGGAGAGACGATGATCGAGAAATGAAGGACGATTACAGATCCTCGGATTTTCTAGAAGATGACTCATCAAATGATAGCAGTAGCCCTCCAATGCCCTCATTCTCAACATCTCTCGCTGCTTTGGAGAATCAAGTACGCACGATCACGACAAGTGTATCTCATCTATCTTCGTCTGGACTTAGTCGCTCCGCTGAAGAGCTATGCAAAAATAGAAACTCTAGTCCGATTCCGATGAACGGTGACAAATCACCTGAATGTGTGGCAAGTCCTGCCGAGTCTGAGATACGTGCATCACCTTCACCTCCACCTCCTGCGTCTACACCTCTCCTCATTCCTCGACCGCCGTCATCTCAACAGCCAGACGATAGCCCTATCGCTGACGGCTCGGAGACTAATTCTTCCCATGGTGCATTAGACTTGACACCGCGTTCAGCCGTCACCGCCGCCGTTCAAGCAGTCGTCACAGGTCCAACTCCTGGCGTCTTCTCCGGGTTCGGCCTTCTGCCCCCCGGTTCCATGACCTCTGCGCTCTCAGCGCTCACCACGTCAGTGCTCACCTCGACATCTTTCAGCCCTCTTGGCATGGCAGTCGGCCCAGCAGCTCGACCCGGCAATACTACATGCAACATTTGTTTCAAAACATTTGCGTGCAATTCAGCATTAGAGATTCATTTTCGCAGTCATACCAAAGAGCGGCCATTTAAATGCACTGTCTGTGAAAGAGGTTTCTCCACAAAGGGCAATTCAGCCCCACTCGATGCCCAATCAAACCGTGATTGTATCTGTGATCAGTGGCGTATCCAGCGGGGGGACAGTGGGGGTCGAGAGAGTCAGACATCTACTGACAACAATAAAAGACACAGAAAGAGAAATGGAAATGATGATTCTAATAGGCACAAAAAGCAGGGCAATGGATCAAGCAGCAACAAGAAGTACAGTACTCTGCCCCCACTCCTGTGCAACCCTGGATACGCCGCTGAATGGAACCCTTTATTGGGTAACATGAAACAGCATATGCTCACCCACAAGATTCGTGACATGCCCTCTCACCTTTTTGAGAATATCAAGCCACCGCATCCACCGCCAATACATGAGACAACAGCGTCCAACGACGACAACAGCGTCCCAGAGGATGTTCGACCTCCACCTCCGCCACCCCCACCGAAGATCGAGTCACCAGTCATGATGAAAATGGAGATGGGGATGAAGAGGTCACCACCGGAGGGCGAATCACTTTTACCAATACCTAAACGACAACCAGGCTTGCCAAAACACTTATGCCATGTTTGCAATAAGAACTTCTCATCTTCTTCGGCCCTTCAGATCCATATGCGCACCCACACTGGTGACAAGCCATTCAGATGCACTGTCTGCCAAAAAGCATTCACCACTAAAGGCAACCTTAAGGTACACATGGGCACACATATGTGGAGCAACGGGGCGTCGCGACGCGGTCGACGCATGTCCTTGGATCTGCCACCAATACCAATGACGCCAAAGGATTCAGAGTTCCTACAACGGAGGCCAGATCTTTTCTACCCATATCTACCGGCACCATTCCTTAACGGAATGCAGCAAAAGTTAAACGAGATCTCCGTGATCCAAAGCGTCAACAGCAACAACATCAGTGGGTTGAATCACCCCAACAGCAAATACGCCAGTCTCCTGGGGTTCGGAGGTTACTGCGTCGATAAGCCCCACTTACCTGAACCTCATCAGCGATCTCAGACCAACTCTCCTCTCTCAGACAAGCCCCCCTCTTCCGTGTCGTCGCCGCCCCCCCTCTCGCTCACCCACCATCATGGATCACCACCCCTGAGGGAGCGGGAGTCCGACATCTCCGACCGGGACTCGATGCCAAGAGGAATGTGGGACCTTCACTATGACCGTAAACCTACTATGACCAACGGCGACGAACCTATGAACGTGTCACCCTCCCCGCCCCCCGGTCATGTGACTTCGCACCCACCCCCTACCCCGCGAGGTGAAGGTCTAGCAGCATAA
Protein Sequence: MSSREVAISVRRISESTNVVPSTQAAGKNKDRQMRREVSSFSAEIDATIEDAEGDDTHKSAEERVCRHCNAEFPELPDFYAHKKECDRKAMLLGIGEEPSSGAEEMEEEEEDEESNSVAEEGVKRLEEVQRQRQDAENNNRGEGGDVEVDGELQDGEGFPFPAPAVPAPASHVTLEALQNTKVAVAQFAATTMANNGDNAAALQELAVLQSTLFTLQHQQVMQLSLIQQLQSQLSITLPKDDDSLAPSPPPVPVTPTIPIPPQSTTPKSSQTPIPPHISSASSSPPAQTYMNSLQSMCSISSTLADTIITNNDPMPLNEPNTLDMLQKRAQEVLDNASQGLLANNLADELAFRKSGCKSLSPYDSKTGGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHTSKFPHIKMNPNPVPEHLDKYHPPLLAQMGQSLSPGHSPHPHHPHSHHPPPPHPHHPFHSSSSFPQTSIPLYRPPQPQDLMPHHQQPPPLHQLDSGKPMLPGHPMFSPRAEQDMPENLSKPQSSHSSPPPPSEHSDLYKKEPLDDEQHHSDDGGRLSPKHEVDTDHEPDEDHDMEEGCYDPSPYDDCSLDSKYSDEDMLMGEPDSPLMDKNEDSLQEQPENLSSKSTSAVRQSIEQRLPPSFPFPSHAVSPPSSTSSGSANNTPNPGAHIPFNNDLDPSKDPAIYTNLLPRPGSNDNSWESLIEVTKTSETYKLQQLVDNIENKLTDPNQCVICHRVLSCKSALQMHYRTHTGERPFRCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEIKEYPHSPFSLPNSMNPFLAQGFHIPGMPLPPHGLHLGPEYDDRRDDDREMKDDYRSSDFLEDDSSNDSSSPPMPSFSTSLAALENQVRTITTSVSHLSSSGLSRSAEELCKNRNSSPIPMNGDKSPECVASPAESEIRASPSPPPPASTPLLIPRPPSSQQPDDSPIADGSETNSSHGALDLTPRSAVTAAVQAVVTGPTPGVFSGFGLLPPGSMTSALSALTTSVLTSTSFSPLGMAVGPAARPGNTTCNICFKTFACNSALEIHFRSHTKERPFKCTVCERGFSTKGNSAPLDAQSNRDCICDQWRIQRGDSGGRESQTSTDNNKRHRKRNGNDDSNRHKKQGNGSSSNKKYSTLPPLLCNPGYAAEWNPLLGNMKQHMLTHKIRDMPSHLFENIKPPHPPPIHETTASNDDNSVPEDVRPPPPPPPPKIESPVMMKMEMGMKRSPPEGESLLPIPKRQPGLPKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEISVIQSVNSNNISGLNHPNSKYASLLGFGGYCVDKPHLPEPHQRSQTNSPLSDKPPSSVSSPPPLSLTHHHGSPPLRERESDISDRDSMPRGMWDLHYDRKPTMTNGDEPMNVSPSPPPGHVTSHPPPTPRGEGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00895065;
90% Identity: iTF_00243530;
80% Identity: -