Bput029865.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- -
- Assembly
- GCA_907164805.1
- Location
- OU015474.1:527766-536144[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 22 0.076 6.7 8.3 0.8 1 23 309 332 309 332 0.96 2 22 0.006 0.53 11.8 0.1 2 23 357 379 356 379 0.93 3 22 0.061 5.4 8.6 0.0 1 23 385 407 385 407 0.96 4 22 0.04 3.6 9.2 0.6 1 23 422 444 422 444 0.98 5 22 0.0014 0.13 13.7 0.9 1 23 497 520 497 520 0.95 6 22 0.017 1.5 10.3 0.1 2 23 525 547 524 547 0.96 7 22 1.2 1.1e+02 4.5 0.3 1 21 567 587 567 588 0.95 8 22 0.0063 0.56 11.7 4.9 1 23 603 626 603 626 0.93 9 22 8 7.1e+02 1.9 0.1 2 23 703 725 703 725 0.86 10 22 0.093 8.2 8.0 0.0 2 23 732 754 731 754 0.95 11 22 0.0016 0.14 13.6 1.1 1 23 761 783 761 783 0.97 12 22 1.2 1.1e+02 4.5 0.0 2 23 813 837 812 837 0.94 13 22 0.0027 0.24 12.9 4.3 1 23 840 863 840 863 0.96 14 22 0.038 3.4 9.2 1.3 2 23 870 892 869 892 0.96 15 22 4.3e-05 0.0039 18.5 1.0 2 20 919 937 918 939 0.93 16 22 0.14 13 7.4 2.1 1 23 957 980 957 980 0.96 17 22 0.0056 0.5 11.9 0.1 2 23 984 1006 983 1006 0.96 18 22 0.27 24 6.6 0.0 2 23 1010 1031 1009 1031 0.94 19 22 1.6 1.4e+02 4.2 0.1 1 23 1067 1090 1067 1090 0.93 20 22 0.13 11 7.6 0.2 3 23 1100 1121 1099 1121 0.96 21 22 0.5 44 5.7 0.0 3 23 1127 1148 1127 1148 0.96 22 22 0.00069 0.061 14.7 0.6 1 23 1255 1278 1255 1278 0.98
Sequence Information
- Coding Sequence
- ATGCAGAGTGAAAGTGTTCCTGTGGATCCCGCGGCGCGATGTCGTCTGTGTGCCGCACACGAAGCAATTAAAGTGGACATTTTTGGGGATGAAGGACGTTCAAGGAACTTGGTTAACAAGATTGAGACATGCCTACCAATCACTGTGGAGTGCGAGGACCGTCTGCCCAAGTCTCTGTGTTACCGCTGCATGTACCTGCTGGAGAAGTTCTACAACTTCCGCATCAGCTGCGTGACTGCGGCCGAGCTGCTGCGCGTCTGCGTCGATGAGCACGAGTCCCGCGCGACCCCGGGGGACGAGAGCCAGCGCTACGGAGATCTCGAGCAACAGCTGTGCTCCATGAAGAAGGAGGTGCAGCACGACGTCATGCCCACGCTGGAGATACAGGTGGCGTCGAGTCCCAAGGCCGCGCCGGTCCCGGCTCCTCCGAGTCCCGACGTGCAGGAGGTGGCTCCCGTCATCGACCTCGAGGCGCCCAAGTCCCAACCCAAACCCAAACCCCCGTCGAGACCTTCCCCGCAGTCGAGGAGCGTGCTAAAGCCCTCCGTGACCAACCGGCCCGGCCAATCCAAGCCCGGCCCCAGGACTCCCCACCGGATCGTCCAATCGGAGCGGACGGTGGTCCGTGTCGACCGACCGAACGCTGCCGACGACAAAGCCATCATAAGCATCGACCTGACCGACGAGCCGGGCACGAGCCGAGACGCGCGCCACAACGGCGGCCTGCTCAAGGAGACTCTCCTCCAGAGCCGGCGGAAACGTCCCGGGTCCGTCGAGCCGGAGGAGTCGGGCGGACGCAAGCGCGTGTCGAGCGTCAAGGCCGTCGAGAACGTGGTGAACATGCTGAACGACGAGGCGGGCGGGTCGAGCCGTCGCAAGAACGCCAAGCCGCGCAAGATCGCTCGTCCCGACGACGTCCGGCCGTACGCGTGCATGCTCTGCGACAAGAGCTTCTTGCTGAAGAACGCGCTGAGCCGACACTTCAACACCAGCCACGGCGTGGAGACGGCCGACGCGAGGCCCGACGTCGAGTGCGTGGACCTCGACGACGTCGAAGCCGCGACGCTGCCGTGCGAGATCTGCGCGCGATCGTTCAACGACCGGCCCAGCCTGTGGCTCCACCTGCTCTACACGCACAAGGACGCGGCGCCGTACGCGTGCGGCCTCTGCCTCAAGGTCCTCCCCGACAACGGAGCGCTGTCGCGACACTGGAAGGGCCACTACGCGTCGGGCCGGGCGGAATCCTTCGCGCTCGACCGCCGGTACTCGTGCGAGATCTGCGGTCGGCAAGACAACTCGCGCAAGAAACTACTCAACCATCTCAAGATCCACGTCTTCGACGGCGGCTACGACCCGGAGATGCTCGTCATCGTCAACTCGGACTGTTACGACGCGATCGGTCGAACTTTCGATTTCGGCGATTTCGACGTCTCCCAAGACGCCAGTTACACCGGTTCGACGATCGCCGGTTGCGAAGTGATGCCGTACCACCCGTGCAATCTCTGCTTCAAGGCGTTCGAGACGGAAGAAACGCTCGCGAAACATCGCAAACTGGTCCACAAGGTCGTGATAACGTGCGAGGTCTGCCAGGAGGGCTTCGACTCGGAGGAACGGCTGATGCGCCACGTGACGACGGAACACTTCGACGGCAACCACATGCTGGCCGACCCGTACGAGCCGATCGTGGGCGTGGACGTGTTCTACTGCAAGTACTGCTCGCACGAGTTGGCCAGCATGGAGGCGGTGTCGCGGCACCAGCGCGCCTGCAAGACGGCCGCGGCCAAGAGGCAGGACGTGTCGTGCTCGCACCACTGCGAGATATGCAAGAAGTCCTTCGTGTCGGAGGATTGCCTCGTCAAGCACAAGAAGGGCGCTCACAAGGAGAGCGCGGAAGATCCGGACGTTGGTTACGACGCGTTTTATTTCTGCGAGCTCTGCGGCAGTTCTCACGCGACTAAGGTGGGGCGATGGCGCCACGTGATATCGAGCCACGCCGACGAGCCCTCGATCCGCTGCGATTACGAGTCCTGCGGCAAGATCTTCGCCGCCGAGTCCCTCTGCCTGGACCACCGCTCTCACCACCGCCTCCAGGGCAAGACGCCCAACACCTGCGAGCTCTGCGGCAAGCTGTGGAACTCCACCGTCGAGTTCTGGAAACATGTGCAAGGGGTCCACGCCGAGATGCTGCCGCTGATCTGCGGGATCTGCCTCAAGATGTTCGCGGAGGTCGACAGCCTGGTGTACCACGTGAAGACCACGCACGAGCTCGACGAGGGCAGCTACCACTGCGCCGTTTGCGCACGCCAGTACTCGAACCAGTCGAAGCTGTTGCGCCACCAAGCCATCCACGCGACGGCTGACGCGGCCAGGATCGTGCTGAAGACGCCGGCGGTGCGCGTCGGAGCGGTGGCGGTCAAGAAGCCGATTGACGCGTTGCGCTGCGACGTGTGTCCCGGCGCGGAGGACTTCGAGGACGCAGGCGCGCTGGCCGAGCACCGCCGGTCGGTCCACGCGCTGCATCCGTGCGACTTCTGCGAGAAGTTTTACGGGCGGAATTCGCACCTGTGGAAACACGTGAATAAGAAGCATCGCGGCAATCCGGAGATAACGTGCACGATATGCCAGAAGGTGTCGGCCACCAAGACGCAGCTGTTCTTCCACTACCGCAAGCTGCACAAGGGCGAGGTGTCCCTGCCGGACGACCACATCCTCTCGATCCCGACGTTCCGGGCCCGGGCGACGCCGCCCACGTGCGACTGCCCGGTCTGCGGCAAGGCGTTCTCCAAGCGCTACCTGCTGCGCAAGCACCAGGCGTTCTGCTTGAAGCGGGCCCGGCAGCGCCAGAGGGCGGGCAAGGGGGCCGACGGGCACGAGTGCGACGCGTGCGGGCTCTGCCTGGACACCAAGTCGAGGCTGGCCGACCACAAGCGAAGCTCGCACAAGGCGAGCCCCTGCGAGAACTGCGCCGAGACCTTCCCCACCCGCCCCTCCCTCCTCGACCACCTCCGCTCCTCCCACCCCTCCCTCGTCTGCCCCGTCTGCTCCGCCCTCACCCGCTCCCCCTCCGCCCTGGCCGCCCACACCGCCCACCACGCCACCACCGCCCACCCCCCCTACTGCCGCCCCTGCGCCGAGGTGCTGCCCACGATGGCGCGAGCGTACCACCACCTCAACGCCTACCACAAGGGCGACGTGCCGTTCACGTGCGGCGTGTGCCTGGAGCGCCTGCCTGACACCGCGGCGCTCCGATCACACGTCTCGCAGCGCCACCCCGGCGCCACCGACGCCGACAGGGCCTGCAGGATATGCGCCAAGGCGTACAGCACCAACTACAAGGTCGTTGAGCACGTGAAGAAGTACCACGCGGGGTATCGGGGCTGTCGAGAGTGTCTGGCAGTCTTCGAGGACAGAGGGGAGTGGGAGCGCCACGCGAGGGAAGCGCACCAGAACAAGGAGGAGGAGGAGGAGACGAGAGGAGACGAGGAAGAGACGGGGACGGCGAAAGTGAACGAGGGGAGAGACGGCGAGGGAGAGACGGGAACGTTGAAAGTGAAAGACGACGAGAAAGAGATGGGAACGGTGAAAGTGAACGAGGACAAAGAGAAAGTGAACAAGGGGAGGGATGGCGAAGGAGAGATAGGAACGGTGAGAGACGAGGAGAAAGAGAAAGCAACTGTGAAAGTGACCGAGGAGAAAGCGTCGTCGAAAGCGAAAGCCGCGACTGTCGAACTCATCTCCCCGTCGCCGCGCGCGAAACGCAGCTACTCGTGCGACAAGTGCCCGATGACGTTCGGCAAGCCGTCGGAGCTGAGCGGTCACAAGCGACGCCGCCACCTGTCGACGGGGCTCAAGGTCGAGTCCGGCGTCGAGGAGGACATGCCCGTGCTCGAGCCCAACGCGCCCGTCGACCCGTGCAAGTCTCCCGGCCCGCCCGGCGACCTCAGCATGCCGACCTTGAGCGAGGCGACACTGGAGCCGACGGGCGTGGAACCTGCGGAGGTCTCCGTGGTGACGTGCGCGGAACCTGCGGGGGTCTCCGTGGCGACGGACGGAGGTGAGGTCGTTGTCGTGGACACGGACAAAGTTCCTATGAAGAGCGAGGCAACGGGCGCGGAACCTCCGGAGGTCTCCGTGGCGGCGGGCGAGGACGCGGACATAGTTCCTGTGAAGAGAGAGGTGGAGGAAATGGATGTCGGTAGTCCGGTGAAAGTGGCCGGGAAGTCGGGACACTTCCTGGAGTCTCTGGAAGACGCGCTGGATATTTTAGAGGCTCAGAACAGCTAG
- Protein Sequence
- MQSESVPVDPAARCRLCAAHEAIKVDIFGDEGRSRNLVNKIETCLPITVECEDRLPKSLCYRCMYLLEKFYNFRISCVTAAELLRVCVDEHESRATPGDESQRYGDLEQQLCSMKKEVQHDVMPTLEIQVASSPKAAPVPAPPSPDVQEVAPVIDLEAPKSQPKPKPPSRPSPQSRSVLKPSVTNRPGQSKPGPRTPHRIVQSERTVVRVDRPNAADDKAIISIDLTDEPGTSRDARHNGGLLKETLLQSRRKRPGSVEPEESGGRKRVSSVKAVENVVNMLNDEAGGSSRRKNAKPRKIARPDDVRPYACMLCDKSFLLKNALSRHFNTSHGVETADARPDVECVDLDDVEAATLPCEICARSFNDRPSLWLHLLYTHKDAAPYACGLCLKVLPDNGALSRHWKGHYASGRAESFALDRRYSCEICGRQDNSRKKLLNHLKIHVFDGGYDPEMLVIVNSDCYDAIGRTFDFGDFDVSQDASYTGSTIAGCEVMPYHPCNLCFKAFETEETLAKHRKLVHKVVITCEVCQEGFDSEERLMRHVTTEHFDGNHMLADPYEPIVGVDVFYCKYCSHELASMEAVSRHQRACKTAAAKRQDVSCSHHCEICKKSFVSEDCLVKHKKGAHKESAEDPDVGYDAFYFCELCGSSHATKVGRWRHVISSHADEPSIRCDYESCGKIFAAESLCLDHRSHHRLQGKTPNTCELCGKLWNSTVEFWKHVQGVHAEMLPLICGICLKMFAEVDSLVYHVKTTHELDEGSYHCAVCARQYSNQSKLLRHQAIHATADAARIVLKTPAVRVGAVAVKKPIDALRCDVCPGAEDFEDAGALAEHRRSVHALHPCDFCEKFYGRNSHLWKHVNKKHRGNPEITCTICQKVSATKTQLFFHYRKLHKGEVSLPDDHILSIPTFRARATPPTCDCPVCGKAFSKRYLLRKHQAFCLKRARQRQRAGKGADGHECDACGLCLDTKSRLADHKRSSHKASPCENCAETFPTRPSLLDHLRSSHPSLVCPVCSALTRSPSALAAHTAHHATTAHPPYCRPCAEVLPTMARAYHHLNAYHKGDVPFTCGVCLERLPDTAALRSHVSQRHPGATDADRACRICAKAYSTNYKVVEHVKKYHAGYRGCRECLAVFEDRGEWERHAREAHQNKEEEEETRGDEEETGTAKVNEGRDGEGETGTLKVKDDEKEMGTVKVNEDKEKVNKGRDGEGEIGTVRDEEKEKATVKVTEEKASSKAKAATVELISPSPRAKRSYSCDKCPMTFGKPSELSGHKRRRHLSTGLKVESGVEEDMPVLEPNAPVDPCKSPGPPGDLSMPTLSEATLEPTGVEPAEVSVVTCAEPAGVSVATDGGEVVVVDTDKVPMKSEATGAEPPEVSVAAGEDADIVPVKREVEEMDVGSPVKVAGKSGHFLESLEDALDILEAQNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -