Basic Information

Insect: Brachyptera putata
Gene Symbol: -
Assembly: GCA_907164805.1
Location: OU015464.1:8794216-8800723[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.1e-05 0.001 20.3 0.8 1 23 11 33 11 33 0.99

2 15 0.00017 0.015 16.6 2.3 1 23 39 63 39 63 0.94

3 15 7.4e-06 0.00066 20.9 3.2 1 23 69 91 69 91 0.97

4 15 3.2e-05 0.0029 18.9 0.4 1 23 97 120 97 120 0.97

5 15 0.0046 0.41 12.1 4.4 1 20 176 195 176 197 0.92

6 15 0.027 2.4 9.7 2.3 1 23 266 288 266 288 0.98

7 15 5.1 4.5e+02 2.5 0.0 11 23 328 340 326 340 0.88

8 15 2.1e-06 0.00019 22.6 2.7 1 23 346 368 346 368 0.98

9 15 3.3 2.9e+02 3.1 0.0 12 23 422 433 421 433 0.90

10 15 0.37 33 6.1 7.2 1 23 438 462 438 462 0.98

11 15 0.028 2.5 9.7 6.3 3 23 473 493 471 493 0.95

12 15 3.1e-05 0.0028 19.0 2.6 1 23 499 521 499 521 0.99

13 15 0.00013 0.011 17.0 0.8 1 23 527 551 527 551 0.93

14 15 1.3e-07 1.1e-05 26.5 1.2 1 23 557 579 557 579 0.98

15 15 2e-05 0.0017 19.6 0.4 1 23 586 609 586 609 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.1e-05	0.001	20.3	0.8	1	23	11	33	11	33	0.99
2	15	0.00017	0.015	16.6	2.3	1	23	39	63	39	63	0.94
3	15	7.4e-06	0.00066	20.9	3.2	1	23	69	91	69	91	0.97
4	15	3.2e-05	0.0029	18.9	0.4	1	23	97	120	97	120	0.97
5	15	0.0046	0.41	12.1	4.4	1	20	176	195	176	197	0.92
6	15	0.027	2.4	9.7	2.3	1	23	266	288	266	288	0.98
7	15	5.1	4.5e+02	2.5	0.0	11	23	328	340	326	340	0.88
8	15	2.1e-06	0.00019	22.6	2.7	1	23	346	368	346	368	0.98
9	15	3.3	2.9e+02	3.1	0.0	12	23	422	433	421	433	0.90
10	15	0.37	33	6.1	7.2	1	23	438	462	438	462	0.98
11	15	0.028	2.5	9.7	6.3	3	23	473	493	471	493	0.95
12	15	3.1e-05	0.0028	19.0	2.6	1	23	499	521	499	521	0.99
13	15	0.00013	0.011	17.0	0.8	1	23	527	551	527	551	0.93
14	15	1.3e-07	1.1e-05	26.5	1.2	1	23	557	579	557	579	0.98
15	15	2e-05	0.0017	19.6	0.4	1	23	586	609	586	609	0.97

Sequence Information

Coding Sequence: ATGCAAAGCAAACACTTGAAGGAAGAATTATATAAATGCAGTGTGTGCTTCAAAGTGCTTTCCACCCTCGGCTCACTTAAAAACCATCAACGTATTCACACCGGAGAGAAGCCGTTTTGTTGCGATGCTCCGAACTGCGAAAAAACTTTCAGCTCCAACAAGTATTTAATCACTCATAAGCGGATCCATTCGGAAGAACGAAAGTTCAAGTGTATTGAATGTGATAAATGTTTTACGCAACAATCTTCACTCATCATACATCGTCGATCTCACACCGGTATAAAACCTTACGAGTGTGAACTGTGCCCCAAAGCATACGTGACGAAAACACTGCTTAATACTCATGTGAAGAGTAGACACTCAAAACACTTCATCCAATGGCAGACTGATGAACAAAGTAAAGAAGAAGCCAACGTCCCAGAAGAAGTATATGTTTGCAAGTTATCTAGCTCGGAGGGAATCTTCTTGCTCCCGGAAGAATTCAACATGTACAAGAATCCCCAGAATCTGGCGTTCACAAAACAATACCTATGTTCCAATTGCAAACGATGTTTTAGCACATTGGCTAACCTTAATTTGCATACTTGTCAAAATAAGCAACCTTTAGTGACTTTGCAAGAAACAAAGCCCGACTCGCTGACTACACACAACGAGCAGGTATCAGATTTGGACGTACCAATGAGTTCCTTGAAAGTTGATAGCAGCGATACAACACATGTTTCACGTCCGACTAGAAAACCACGTGGAAAGCCTGTTGACGTCTCAAATGCATATGTGATCACCCCAGACGAACTTTTCGAATGTGTGATATGTAAAAGGAGAATGACAAAACTGAAGTCTTTCAAAAGACATTTGCTCTCTCATCCGACTTCATTGTTAACAGATTTGGACATACCAATGAGTTCCTTGAAAGTTGATAGCAGCGATACAACACATGTTTCACGTCCGACTAGAAAACCGCGTGGAAAGCCTGTCGACGTCTCGGATGCAAAGTACTTACGTGTTCACATGAACGGTCATACAGGAGAACGGAAATATGCTTGTAGTGAATGCAATAAGACATTTATTCATCAGTCGACTCTTTCCACTCATAGGCGTGTGCATAGAGACATTGCGAAGCCGTTTGAGTGGACCAATGGCAAACCGTTCAGCTTGGAGATAATGCTACTTCTTACACTAAACTACATCAAACAAAGCAAGACAATGCTGCAGAGATACCTATACCAGCAGTACTTCTACCAACTGTTTACAAATGAGATGGCCACTCCGTCAGCATTGAAAGCACATATGGTCGTTCACGGAGATAAAAAGTTCAAGTGTAACGAGCCAGGTTGTTGTAAAGCTTTCTTCCATCACAAGTCGTTACAAGATCATCAAAAGTCTCATATTCCCGAACTGAAAGGTCACACTCATTTGTGTTACATTTGTGGTAAATCCTGCTTGAACTCGTCCAAGTTGAATCACCACTTAATGATGCATGCCGATAAGGAACGGTACAAGTGTGAAGTTTGCAAGAAGGTTTTGACGACGCTGCACTCCCTTAAAGATCATCGTAGGATTCACACGAAAGAGCGTCCGTTTTCGTGCGCCGTGCCCGAGTGCAAGAAATCGTTCACCTCCAGAAAGTATTTACGTACTCACGCGCTCAGTCATTCCAAAGAGCGGAAGTATAAATGCGCGGAATGCAATAAGACGTTTACTCAGCAGTCATCTCTTATTGTTCATAGACGCTTGCATAGTAACATTGCAAAGCCTTTCGAATGCGAGCAGTGCGATCAAGCGTACATTACCAAGACTCTTCTCAAAGCACACATAAAAAGTCGGCACTTATAG
Protein Sequence: MQSKHLKEELYKCSVCFKVLSTLGSLKNHQRIHTGEKPFCCDAPNCEKTFSSNKYLITHKRIHSEERKFKCIECDKCFTQQSSLIIHRRSHTGIKPYECELCPKAYVTKTLLNTHVKSRHSKHFIQWQTDEQSKEEANVPEEVYVCKLSSSEGIFLLPEEFNMYKNPQNLAFTKQYLCSNCKRCFSTLANLNLHTCQNKQPLVTLQETKPDSLTTHNEQVSDLDVPMSSLKVDSSDTTHVSRPTRKPRGKPVDVSNAYVITPDELFECVICKRRMTKLKSFKRHLLSHPTSLLTDLDIPMSSLKVDSSDTTHVSRPTRKPRGKPVDVSDAKYLRVHMNGHTGERKYACSECNKTFIHQSTLSTHRRVHRDIAKPFEWTNGKPFSLEIMLLLTLNYIKQSKTMLQRYLYQQYFYQLFTNEMATPSALKAHMVVHGDKKFKCNEPGCCKAFFHHKSLQDHQKSHIPELKGHTHLCYICGKSCLNSSKLNHHLMMHADKERYKCEVCKKVLTTLHSLKDHRRIHTKERPFSCAVPECKKSFTSRKYLRTHALSHSKERKYKCAECNKTFTQQSSLIVHRRLHSNIAKPFECEQCDQAYITKTLLKAHIKSRHL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -