Bput024286.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachyptera putata
Gene Symbol
-
Assembly
GCA_907164805.1
Location
OU015464.1:15163403-15169047[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.0006 0.053 14.9 0.1 1 23 290 312 290 312 0.95
2 12 4.4e-05 0.0039 18.5 1.7 1 23 320 342 320 342 0.99
3 12 0.00011 0.0095 17.3 0.2 2 23 350 371 349 371 0.97
4 12 1.4e-06 0.00012 23.2 0.8 1 23 377 399 377 399 0.98
5 12 5.8e-05 0.0051 18.1 1.5 1 23 406 428 406 428 0.99
6 12 7.1e-05 0.0063 17.8 0.0 1 23 434 456 434 456 0.94
7 12 1.5e-05 0.0013 19.9 0.2 1 23 462 484 462 484 0.98
8 12 1.2e-06 0.0001 23.4 1.2 1 23 490 513 490 513 0.96
9 12 4.6e-06 0.0004 21.6 0.6 1 23 519 542 519 542 0.96
10 12 2.8e-05 0.0025 19.1 3.4 1 23 548 570 548 570 0.99
11 12 0.00014 0.012 16.9 1.6 1 23 576 598 576 598 0.96
12 12 0.00048 0.043 15.2 0.1 1 23 604 628 604 628 0.94

Sequence Information

Coding Sequence
ATGGCATCTGATAAAGATACAGAAGCTGTAGTTGAAGAAACTGCTGGCGCGGTTCCTCCTACAAGTTCTCACTGTTTGATTTGTCATAGTCGAGTAGGTGTATCTTCACGTAACAGTGTTGACATATTTTCCAAAAATCTTTTGTCTGATGATCGACCAGTTTCGTATACAATCACTTCTCTTTTGGGAGACGCAGTACAAGGTTCGTTTCACAGCCAAGTGATCTGTAAGAAGTGCTACAAACTGTTGTATGAGCTTGATGAAATCGATAGTAGAAGAGTTGAGATAAAAGACGAAGTTCTATGCAATTATAAGCGAACTCTCGAGCTTCGTAACGAAGAAAAAGAGATGCAGGAAGTTGTGAATGTAGACAATCGAAAGTTACCGCTTGGCTCTGATGACGGCAATGTAGTCAAGTACAAACTCTTGATACCTAAAGGGCGCAAGAAAGCTGTACCTAAAAAAATTCAACCGCCTCCAACAAATGGCAGTGGCGAAGAATCCGAGCAAAAGGAGAATGCAGTGACCGAGTGTGATGCTGAAATGATTGATCACGATAGTGACAGCGACTATACGCTAGAACTTCCTGAAGAGGGCCAGGAGTTGACAGTGGAGCATGATGGGGAACAGATCATTGTGCAGATCAAAATGGAACCAGATGATGAAATGAGTGATGTAGAGGTGGGGAGGCCAAAGAGGTTGAAGAGGAAGACAATGGTAAAAGAAGAAGAGTTTGAGCTACCAGATAAGCTTGTGAATAAAGAGGAAACAGACTTCACCTGCTGCCTCTGTGTAGATGAAAAAAATACCTTAATGGATATGAAAGAAATAATAACGCATTTAAAGAAGTTTCACAATGTTCGCGTGTACATATGTGACATCTGTGGTTTAGACTTCAAAAAACGAAATGAGCTGTCAGTTCATCTGGATGAGCACGTAGCAACAGAAGAAGGAGACTTCCAGTGTGAAGTTTGTAATCGAATCTTTACTAACCTCCGACTGTTTCGGGTGCACAAGCGTATGCACTATCCTCAAACAAAGCTCTGGACCTGCGATACGTGCGGCAAACGCTACAGCTCTCGCAACCTGCTAGACGAACACATCAACGTGCATACCGGCTCTCGCCCGTACATGTGTCCCGTATGCGGAAAAGATTTTGCCTCGAAATACACATACAAAGCTCATACCAAAACACATGAAGTTCGCCCTCGTCCCTACGTCTGTGGAGAGTGTCACAAGTCGTTCCTGAGTGCTCAGAATCTCCAGCAACACGAGCGAACCCACAACGGAATGAGAAACTATGTGTGCGATCTTTGTGGTAAGGCTTTCGGCACTGCTCGAAACTTGGAGGTTCATTCGGTGGTACATTCAGGATTCAAGCCATTCATCTGCCGGATATGTGGCAAAGCATTTGCACGAAAGGCGGAGATCCGCGATCACGAGCGCACGCATACCGGAGAAAAGCCGTACCAGTGTGAATTCTGCGGTGCTACATTCAGTCAACGTAGCAACCTCCAGTCGCACAAACGCGCAACTCATTACCAGGACAAGCGCTACAAGTGCAATGATTGTGGTAAAGGTTTCAAGCGACGGCGTCTGCTTGACTACCACATCAAGGCGGCTCATACTGGCGAACGTCCGTTCAAATGTTCGACGTGCGACGCAACGTTTGTGTATCCTGAACACTTCAAGAAACATCGGCGAATTCACACTGGCGAGAAACCATTCCATTGTGAAGTATGCGGCAAGGCATTCAACAGCCGAGATAATAGGAACGCTCATCGATTTGTACACAGTGATAAGAAGCCCTACGAGTGTTTGGTGTGTGGGATGGGTTTCATGCGTAAGCCGCTTCTGTATAATCACATGCAGACCCAAGGCCATCTCAACGACACTATCGTTGTCAATCAGCCTCGTCTTACAACTGACGATGATCTGATTGTTGAATCGTCTGTGGCCGAGATAACGGGCGAACATGAAGATGTGGAAGTGTCGATAGTTGATGGCACCGGTGGGCACTCGGATCAAGAAACCAAACTCTACATTGCCGAACTCAAAGAGCATGTCATTATTCAGGAGGAAGACGAAAACGGACATTTCACGGGAAAAACAGTGGTTGTCGGCGATTCGGACCAAGAAGATGATGGCGAAGACGATGAACATATTGTTCAAGGAGCTGTCGAACATCTCATAATAGATGGACAAGTTCACTTTGCCGACCCCAATGACATGGATATTGATTCTGTAGCCGAGATCACTACTTCGACATCAGAAGGAAGGGGACGAATGGTAGTGGTACCTGCTACACCAAACATGATAAACGCCTCTGGCGAGTGCTACGAAGAACAGATTGCAGCCGATCATGGTGAAGTTGAGTTGACCGATCTCTCGCCGTCACACATGGCCGAAGGTGGACCAGTTCACCTTGTACAAATTCGAATCCCCTCGTCTGACAATCCCGATGGTAGTCGCTGGTTTAATGTGGTTAATGAAGATGTTCACGAGTGA
Protein Sequence
MASDKDTEAVVEETAGAVPPTSSHCLICHSRVGVSSRNSVDIFSKNLLSDDRPVSYTITSLLGDAVQGSFHSQVICKKCYKLLYELDEIDSRRVEIKDEVLCNYKRTLELRNEEKEMQEVVNVDNRKLPLGSDDGNVVKYKLLIPKGRKKAVPKKIQPPPTNGSGEESEQKENAVTECDAEMIDHDSDSDYTLELPEEGQELTVEHDGEQIIVQIKMEPDDEMSDVEVGRPKRLKRKTMVKEEEFELPDKLVNKEETDFTCCLCVDEKNTLMDMKEIITHLKKFHNVRVYICDICGLDFKKRNELSVHLDEHVATEEGDFQCEVCNRIFTNLRLFRVHKRMHYPQTKLWTCDTCGKRYSSRNLLDEHINVHTGSRPYMCPVCGKDFASKYTYKAHTKTHEVRPRPYVCGECHKSFLSAQNLQQHERTHNGMRNYVCDLCGKAFGTARNLEVHSVVHSGFKPFICRICGKAFARKAEIRDHERTHTGEKPYQCEFCGATFSQRSNLQSHKRATHYQDKRYKCNDCGKGFKRRRLLDYHIKAAHTGERPFKCSTCDATFVYPEHFKKHRRIHTGEKPFHCEVCGKAFNSRDNRNAHRFVHSDKKPYECLVCGMGFMRKPLLYNHMQTQGHLNDTIVVNQPRLTTDDDLIVESSVAEITGEHEDVEVSIVDGTGGHSDQETKLYIAELKEHVIIQEEDENGHFTGKTVVVGDSDQEDDGEDDEHIVQGAVEHLIIDGQVHFADPNDMDIDSVAEITTSTSEGRGRMVVVPATPNMINASGECYEEQIAADHGEVELTDLSPSHMAEGGPVHLVQIRIPSSDNPDGSRWFNVVNEDVHE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00243486;
90% Identity
iTF_00243486;
80% Identity
-