Basic Information

Insect: Brachyptera putata
Gene Symbol: -
Assembly: GCA_907164805.1
Location: OU015469.1:17206205-17234169[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 2.1e-05 0.0019 19.5 0.8 1 23 316 338 316 338 0.96

2 21 0.01 0.91 11.0 3.7 1 20 344 363 344 366 0.93

3 21 8.9e-06 0.00078 20.7 0.7 1 23 372 394 372 394 0.99

4 21 2.4e-07 2.1e-05 25.6 1.0 1 23 400 422 400 422 0.98

5 21 1.7e-05 0.0015 19.8 5.6 1 23 428 450 428 450 0.99

6 21 0.00015 0.014 16.8 3.8 1 23 456 478 456 478 0.96

7 21 8.9e-07 7.9e-05 23.8 5.1 1 23 484 506 484 506 0.98

8 21 0.00025 0.022 16.1 1.1 1 18 512 529 512 529 0.95

9 21 0.019 1.7 10.2 9.6 1 23 558 580 558 580 0.97

10 21 0.0073 0.65 11.5 7.1 1 23 586 608 586 608 0.97

11 21 0.001 0.092 14.2 7.2 1 23 614 636 614 636 0.97

12 21 5.6e-06 0.0005 21.3 7.1 1 23 642 664 642 664 0.99

13 21 3.9e-06 0.00035 21.8 2.0 1 23 670 692 670 692 0.99

14 21 2.7e-06 0.00024 22.3 5.7 1 23 698 720 698 720 0.98

15 21 4.1e-06 0.00037 21.7 5.6 1 23 726 748 726 748 0.98

16 21 2e-05 0.0018 19.6 5.6 1 23 754 776 754 776 0.98

17 21 2.5e-05 0.0022 19.3 7.7 1 23 782 804 782 804 0.98

18 21 0.00077 0.069 14.6 7.9 1 21 810 830 810 832 0.94

19 21 0.00016 0.015 16.7 0.3 1 23 838 860 838 860 0.98

20 21 0.047 4.1 9.0 4.5 1 23 870 892 870 892 0.98

21 21 1e-06 9e-05 23.6 0.9 1 23 898 920 898 920 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	2.1e-05	0.0019	19.5	0.8	1	23	316	338	316	338	0.96
2	21	0.01	0.91	11.0	3.7	1	20	344	363	344	366	0.93
3	21	8.9e-06	0.00078	20.7	0.7	1	23	372	394	372	394	0.99
4	21	2.4e-07	2.1e-05	25.6	1.0	1	23	400	422	400	422	0.98
5	21	1.7e-05	0.0015	19.8	5.6	1	23	428	450	428	450	0.99
6	21	0.00015	0.014	16.8	3.8	1	23	456	478	456	478	0.96
7	21	8.9e-07	7.9e-05	23.8	5.1	1	23	484	506	484	506	0.98
8	21	0.00025	0.022	16.1	1.1	1	18	512	529	512	529	0.95
9	21	0.019	1.7	10.2	9.6	1	23	558	580	558	580	0.97
10	21	0.0073	0.65	11.5	7.1	1	23	586	608	586	608	0.97
11	21	0.001	0.092	14.2	7.2	1	23	614	636	614	636	0.97
12	21	5.6e-06	0.0005	21.3	7.1	1	23	642	664	642	664	0.99
13	21	3.9e-06	0.00035	21.8	2.0	1	23	670	692	670	692	0.99
14	21	2.7e-06	0.00024	22.3	5.7	1	23	698	720	698	720	0.98
15	21	4.1e-06	0.00037	21.7	5.6	1	23	726	748	726	748	0.98
16	21	2e-05	0.0018	19.6	5.6	1	23	754	776	754	776	0.98
17	21	2.5e-05	0.0022	19.3	7.7	1	23	782	804	782	804	0.98
18	21	0.00077	0.069	14.6	7.9	1	21	810	830	810	832	0.94
19	21	0.00016	0.015	16.7	0.3	1	23	838	860	838	860	0.98
20	21	0.047	4.1	9.0	4.5	1	23	870	892	870	892	0.98
21	21	1e-06	9e-05	23.6	0.9	1	23	898	920	898	920	0.96

Sequence Information

Coding Sequence: ATGAATGCAGATCAGCACTCCCTGGTTCCAACATCTTCAGCAAGTAATTCAGAGGAGAACTCTCACGCTGGCGCTTTACAAAAGCAAATGGGTTCTCCGACGGACCTCCGAGTGGGTACTTCGGTCGCGCTCTCTAGCGTTGCCAAGTATTGGGTCCTCACCAACCTATTCCCCGGACCGATACCGCAAGGGGTGGTATACGGCTTACAGCACGGTGGCAAACAGCAAGACGGCATGCCGCAGTTGCAACAGCAACATTTACCGGCTGGCGGGTTTGGAATGTCCGCGGAAGGCATGACACTCGTGCCGCACTACCCACAACATTCGCAATCACAGATCCCCGTGTCGTCCGTGCTCAGTTCCACGTCCGGCGCGGTGCCAACCGTGTCCACGGGCAGCCAAGGTCAGCACATCGAGATACCGACGCCGCAGTCCGTCGACCCCGACAAAGACAAGAACCCCGACAAGGGGACGTGCACGACGGAACGATGTGGAGACAATCAGGTTCATTGTCAGGCACGTTATTTAGCTCCTAGAAGCTTTCAAATACACGGCGATAACACGCGAAGGGACTTATCTACGGACGAGGAGAAGCCGACGACTAGTGGATGTCTGAAAGACGAGCGGGGGATATCGCTGGCTGGTTTCCCCCTCCAGGACATCAAGGGTCACATGATGGACATCCGGACGGCTGACGGCAGCATCGTGAAGATCAGCGCCCCCGGCAACGGCGACCAGGAGCTCAGCAAGACGCTCGGCGTTGAGATGGTGCAGAACATGTACAAGGTGAACGTCGAAGACATCAACCAGCTGCTCGCGTACCACGAGGTGTTCGGCAAGCTCCAGAGCGAGATCGCCAACCCGAATGGCGCCGTCAAGCAGCAGGGCGCCGAGACGTCGGGCGGCGCACCCGCGGCGGGCGCCATCGTCACGTCGCCGGGCTCGCACGCCTGCGACATCTGCGGCAAGATATTCCCGTTCCGGTACCAGCTGATCGTGCATCGGCGGTATCACACCGAGCGGAAACCGTTCACCTGCCAGGTGTGCGGCAAGGCGTTCACGTGCGCTGACGAGCTGACCCGCCACGGCAAGTGCCACCTCGGCGGCTCGATGTACACGTGCGCCATCTGCTTCCACGTGTTTGCCAACGCCGCCAGCCTGGAGCGCCATATGAAGCGCCACGCCACCGACAAGCCGTACCCGTGCCAGGTCTGCGGCAAAACGTTTGCACGCAAGGAGCATCTGGAAACACATGCCCGCTCCCATACTGGGGAAACGCCATACCGGTGCCAGTACTGCTCGAAAACATTCACGCGTAAAGAACATATGGTTAATCATGTACGAAAGCACACCGGCGATACGCCCCACCGTTGCGATATTTGCAAGAAGAGCTATACGAGAAAAGAACACTTTCTAGCCCACGTTCTTTGGCATACTGGAGAGACTCCTCACGTTTGTCAGGTATGCGGCAAGAAGTATACAAGGAAGGAACACCTAAACAATCACATGCGTAGTCACACCAACGATACCCCCTTCAGATGCGAGATCTGCGGAAAGTCGTACACACGGAAAGAACACTTTACAAGGCGAGACTCCGCACCGATGCGATTTCTGTTCGAAAACCTTCACGAGAAAAGAGCACCTACTTTGCAGCACACTGGGGAGTCTCCTCACCGCTGTCAGTTCTGTTCAAAGACATTTACACGAAAAGAGCACCTCATTTGTCATATAAGACAACACACTGGTGAGACCCCATTCCGTTGCCAGTTCTGTTCAAAGACGTTTACGCGAAAAGAGCACCTTATTTGTCATGTTAGAGAACATACTGGGGAGACCCCATTCCAGTGCCAGTACTGCTCTAAGACGTTTTCTCGAAAAGAGCACCTTATTTGTCACGTCCGCCAGCACACGGGCGAAACGCCGTTCCGCTGTCAGTTCTGTTCAAAGACGTTCAGTCGCAAGGACCATCTGACGTCGCACACGAGAACACACACCGGCGAGACACCGTTCCGTTGTGCGTACTGCGACAAGTCGTTCTCGAGGAAGGAAAAGATGGTCATTCACACGAGAACTCATACAGGCGAGACACCCTTCCGCTGTCAATACTGCTCGAAAACATTTAGTCGGAAAGATCACCTTAATTCCCACGTCCGCCAACACACCGGCGAAACCCCATTCCGCTGTCAGTACTGCTCGAAAACGTTCAGTCGGAAAGAACACCTAAATTCCCACGTGCGACAACATACCGGGGAATCGCCGCACAAATGCCAGTACTGCTCTAAGAGTTACACGCGGCGAGAGCATCTAAATAATCATATTCTCATTCATACAGGCGAATCTCCGCACAGGTGCGAATTCTGTCAGAAGACGTTTACGAGGAAAGAGCATTTGACAAATCACTTGCGCCAGCACACAGGAGACACGCCCCACTGCTGCAACGTCTGCTCGAAGCCGTTCACGCGCAAGGAGCACCTGATCGCGCACATGCGCTGCCACAGTGGCGAACGCCCGTTCGTCTGCGCCGAGTGCGGCAAGTCGTTCCCGCTCAAGGGCAACCTGTTGTTCCACCAGCGCTCGCACAACAAGGGCGTCGCCGCCGAACGGCCGTTCCGTTGCGATCTCTGTCCCAAGGATTTCATGTGCAAGGGCCACCTCGTCTCTCACCGCCGCTCGCACTCGGGCGACCGTCCGCACGCCTGCCCCGACTGCGGCAAGACGTTCGTCGAGAAGGGCAACATGCTGCGCCATCTCCGCAAGCACGCCCCTGGGGGCGGCGAGGTGTCTGCCGGTCCCGCCGGTCCGCCCCTTCTCCACCAAGTGCCGCCGACGCTCCACCTCCAAGTGCCGCCCACGCTGCATATCCAACATCACGTGCCTATACCGCCCCCGACCCAGTCGCACCCCCACGGCGCGGTCCCGGTGCCGCCACCCAACCTGCTGCCGGCCGCGTCCTACTGA
Protein Sequence: MNADQHSLVPTSSASNSEENSHAGALQKQMGSPTDLRVGTSVALSSVAKYWVLTNLFPGPIPQGVVYGLQHGGKQQDGMPQLQQQHLPAGGFGMSAEGMTLVPHYPQHSQSQIPVSSVLSSTSGAVPTVSTGSQGQHIEIPTPQSVDPDKDKNPDKGTCTTERCGDNQVHCQARYLAPRSFQIHGDNTRRDLSTDEEKPTTSGCLKDERGISLAGFPLQDIKGHMMDIRTADGSIVKISAPGNGDQELSKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIANPNGAVKQQGAETSGGAPAAGAIVTSPGSHACDICGKIFPFRYQLIVHRRYHTERKPFTCQVCGKAFTCADELTRHGKCHLGGSMYTCAICFHVFANAASLERHMKRHATDKPYPCQVCGKTFARKEHLETHARSHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGDTPHRCDICKKSYTRKEHFLAHVLWHTGETPHVCQVCGKKYTRKEHLNNHMRSHTNDTPFRCEICGKSYTRKEHFTRRDSAPMRFLFENLHEKRAPTLQHTGESPHRCQFCSKTFTRKEHLICHIRQHTGETPFRCQFCSKTFTRKEHLICHVREHTGETPFQCQYCSKTFSRKEHLICHVRQHTGETPFRCQFCSKTFSRKDHLTSHTRTHTGETPFRCAYCDKSFSRKEKMVIHTRTHTGETPFRCQYCSKTFSRKDHLNSHVRQHTGETPFRCQYCSKTFSRKEHLNSHVRQHTGESPHKCQYCSKSYTRREHLNNHILIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGDTPHCCNVCSKPFTRKEHLIAHMRCHSGERPFVCAECGKSFPLKGNLLFHQRSHNKGVAAERPFRCDLCPKDFMCKGHLVSHRRSHSGDRPHACPDCGKTFVEKGNMLRHLRKHAPGGGEVSAGPAGPPLLHQVPPTLHLQVPPTLHIQHHVPIPPPTQSHPHGAVPVPPPNLLPAASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00243475;
90% Identity: -
80% Identity: -