Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_907164805.1
Location
OU015470.1:24570904-24573702[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.9 1.7e+03 0.1 0.0 3 13 136 146 135 155 0.81
2 6 0.0025 4.9 8.3 0.1 22 46 213 238 201 238 0.88
3 6 1.1e-12 2.2e-09 38.2 0.0 2 43 245 288 244 291 0.93
4 6 1.2e-11 2.3e-08 35.0 0.1 3 44 301 348 299 350 0.92
5 6 2e-11 3.9e-08 34.2 0.0 1 41 356 397 356 401 0.96
6 6 3.2e-13 6.2e-10 40.0 0.0 2 42 410 451 409 452 0.98

Sequence Information

Coding Sequence
ATGGCATCTGAGGAATCATCTGTACAGTCGATTGAGTTGGAAACTGTTACCGACGACGATGGAAAGTATTTTGAAGCTCTGTGTTTAAACATGAAACTTATGAATAGCTTATGTTTTATAGAAGAAACTTTGACTAATCGTCTCCAGGTTATTCGGACCAAGCTAGCCGACATTAAAGTCGATATTGACGTAGCTACCTCGGGTACCAAGATTCAACGCATGCAAGCTATTTCACAAAAACGTAATGATGTTCATACTCTTAAACAGGGGGCCTCATATTACCTGCGTAAATTTCTAATGCCTTATTTTGGGTCAGGTTTGACAGGTAAACCTTTGCCCAATGCAGATACTAAAATGAAAGAAGCTAATTGTGATGCAGCATTGTCTTTGTTGAACACCGTAAAACCGTGGACAGAAGAAGACAAAAGATGTCTTCGATATACAATTCATAAAATGGAAGTTGACCGTGCGAGAAACTCATACACTTCTTTCCGTGATGCTCTTCTAGTGCAACGAGACAAGTGTGAAAGTTCTGATGAAAGAGATGAACTGAATAAGCATATTTATAAATTCTCTGCGGATAATATCAGAACAATGGATTTGAAAGACTTATTAAAGAGTAGCAACGAGGATTATGATTGGGCTCAGGTTGCCCTGAAGTTGCGTAATATGCACAGCCCATTGGAATGTAAAAATATGTGGACCAATTATTTACATCCTAAGTACAAGAAAAGTGTGTGGACTGAAGACGAAGATGATAGATTGGTGGGCTTGGCAACAAAGTACGGGAACCAGAACTGGGAAACAATAGCACAAGAACTAGGAACGAGTCGTTCAGCGTATTCCTGCTTCATCCATTACCAAGGTCGCCTCAACAATGAAGCACTGTCAATGAATTCGGCGTGGTCGCCAGAAGAAGATAACAGACTTTTAGAGTTGATTGAAAGCAATAGAAACAGTGACGGTAATGTGATTTACTGGGATAAAATAATGGCTTTTATTGGTGATCGAACAAAAAATCAAGTTATTGGTCGATGGAAGTATACGTTAGATCCGACAATCAAGAGAGGAAAGTTTTCCGACGCAGAAAGACAGTTGTTATTGGAAGGTGTTAACAAGTATGGTCACAATTGGGTCCGCATTAGGAACGATCTGTTACCCGATCGAACGAGCGTGCAGATACGCGACCACGCCAGTCGTACGGTGTTGGCTGTTCACTTGAAATGTGGGAACTGGAGTTCGGAAGAAGATGAGAAGTTGATGCGGCTCGTGAACGTGGTTGGCTACGGGCAGTGGAGTAAGATCGCTACGTATTTCCCAGACCGCGGCCGAGTGGCTCTCAGGAATCGGTACGGAGTCATACGCAAGTTTCGATTGAAGTACGGAACTGCGGCGTCGGAGAAAGAACCGATGCGACCGCCCACGAAGCAAGGTCGTCGGAAAGTCAAGCCCAATATTCGCAAGCAAGTTATGCTGAACAATCGAAAAGAAGACCTTGGAGAAGAGTTTGCCGAGTATTTTCGAAGTGCGTATTACGTAAACCGCGGGGGAAAAGAGAAGAGATTATGCACCGGTTCCGAGATAAAAGAATACAGTAACGTTCTGAACAATTATCTTGTCACTTTCGATGCTGCAGTCGAAGTTCCGTCCGCAGACGACCTTCGAAACGACCCTCACTTTCGTTTGCTAGACCAAGAAACTCTGATTTATATGCTAGACAATGAGTCTATTGAACGTGTAGATTATGTAAAGACTATTTCGTCTTCTCCATCGATACCCATGAAACCGAGATCGTTGATTCCAAGTGGGCGTAATGCTGGTTTGAAACCTGGGATATTCTTAGAGTCGGTCGCGTCGTCGTGTACCCACGTTCCTCGACGTTCGCCTTCCCTGTCGTTACCGACGACATCAAGCGCCTACGACCTGGAGACTTATGACTCGATCGCTGCCGACCGCCCTTCAACGTCATCAACCGCCAGCAACAGTGAAACATCTCGCGAGTATCCTCGTGGTCCGTTGGATCTGTTCGTTGCCCAGCGTGTTCCTCCTGCCGAGGAATCAAACGGCCGCGCATTGGATGTTCACGCCAAAGGTGTGCGGCGTAAACGCGACGACGGAAGCTCGGAGTCGAAGGATCGAGAGTCATCGTACGACAAACGCTACGAGCTGTACTACGAACATTATTCCGGTGAAAGTGACGAAACAGAAATGGACGGAACGGATTCGATCTTACGATCGTCGCTCGACGAATCATCCTCCGAGGATGATTTTTCATTGCCTTTCGACAGTTCGAGACACGCCGAACTACTCCCGTCGAATCCTACAAGTGTCGAGGAAAATTCTAACCGCCAGAAACATTGTGGATATTATTTACCTCCAAACTCCCAAACTCTATCCACTTTCCGCTCGCTGCTCATGTCAGGGAGAGAACTGGAAGAGATGAGCGGAGGCGAGACGCGGAACGATGGCGCCGTATCCAAGAGAGGAGCGGAGGCTGGAGAAGTGTGGATGAAGAGGCTGGAAACGTTGTTTCACTTCCCGTGCCTGATGTCCCGAGAAGCGCCGGAACGAAGGCCTTGCCCGGTGGGTCCTGTCCCGGCGCCCGCGGAAGAGAGCGACCCGCCGCCGAGGAAGAAGGCTGGCAGGAAGCCGTCGCTGCGTCCGAACAAGAGGAAGAAAGCCGACGGCGAGCCGACGAGGAAGTACGTGCGGACCGGGAAGTACAAGGCCGTCGCAAGTATCGACCCGGTCGCCAAACGACGGTTACGGCGGGACGGATTGTCGAGCGAGGCCGAGTGA
Protein Sequence
MASEESSVQSIELETVTDDDGKYFEALCLNMKLMNSLCFIEETLTNRLQVIRTKLADIKVDIDVATSGTKIQRMQAISQKRNDVHTLKQGASYYLRKFLMPYFGSGLTGKPLPNADTKMKEANCDAALSLLNTVKPWTEEDKRCLRYTIHKMEVDRARNSYTSFRDALLVQRDKCESSDERDELNKHIYKFSADNIRTMDLKDLLKSSNEDYDWAQVALKLRNMHSPLECKNMWTNYLHPKYKKSVWTEDEDDRLVGLATKYGNQNWETIAQELGTSRSAYSCFIHYQGRLNNEALSMNSAWSPEEDNRLLELIESNRNSDGNVIYWDKIMAFIGDRTKNQVIGRWKYTLDPTIKRGKFSDAERQLLLEGVNKYGHNWVRIRNDLLPDRTSVQIRDHASRTVLAVHLKCGNWSSEEDEKLMRLVNVVGYGQWSKIATYFPDRGRVALRNRYGVIRKFRLKYGTAASEKEPMRPPTKQGRRKVKPNIRKQVMLNNRKEDLGEEFAEYFRSAYYVNRGGKEKRLCTGSEIKEYSNVLNNYLVTFDAAVEVPSADDLRNDPHFRLLDQETLIYMLDNESIERVDYVKTISSSPSIPMKPRSLIPSGRNAGLKPGIFLESVASSCTHVPRRSPSLSLPTTSSAYDLETYDSIAADRPSTSSTASNSETSREYPRGPLDLFVAQRVPPAEESNGRALDVHAKGVRRKRDDGSSESKDRESSYDKRYELYYEHYSGESDETEMDGTDSILRSSLDESSSEDDFSLPFDSSRHAELLPSNPTSVEENSNRQKHCGYYLPPNSQTLSTFRSLLMSGRELEEMSGGETRNDGAVSKRGAEAGEVWMKRLETLFHFPCLMSREAPERRPCPVGPVPAPAEESDPPPRKKAGRKPSLRPNKRKKADGEPTRKYVRTGKYKAVASIDPVAKRRLRRDGLSSEAE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-