Bput032721.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- bab1
- Assembly
- GCA_907164805.1
- Location
- OU015468.1:1159714-1162266[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-16 1.6e-13 51.1 0.0 1 43 28 71 28 73 0.95 2 2 2.6 2.5e+03 -0.8 1.5 6 15 152 161 150 176 0.79
Sequence Information
- Coding Sequence
- ATGTGGCAGAAGTGCTGGAACACGAACCAGAGCCTGGTGCACAACCTGCGGTTCCGCGAGCGTGGCCCCCTCAAGTCGTGGCGGCCCGAGACCATGGCCGAGGCAATCTACTCGGTGCTGAAAGAAGGTCTCTCGTTGTCTCAGGCGGCACGGAAATACGACATACCTTATCCCACGTTCGTGCTGTACGCCAACCGAGTGCATAACATGCTGGGACCGTCCATGGATGGAGGGGCAGATTTACGCCCCAAGGGTCGCGGCCGGCCTCAGCGCATCCTGCTAGGCGCGTGGCCCGAGGAGCACATACGCGGCGTCCTGCGCACGGTCGTGTTCCGCGACACTGCGGGCCACATCAAGGAGGAGTCTCAGATCGGCTACGCGTCGCCGCACCCCATGTCCAACTACTCGCTGAGCAACGGGCCCGAGCAGTCGGTGTCGCCGACCTCAGCGGCGGCGGCGGCGGTGGCGGCCGTGGCTCAAGGGCTGCGCCAGCAGATGTGCAGCATGGTGGCGGCAGCGCAGCATCACGCGCAGCTGGACCCCAGCCTGCTGGCGCACTGCGGCCTGCAGAGCAACGGAGCGCTGGGAATGAGGTTGCCGAGCAGTCCCAGCAGTCCGACGGAATCGGCCGGCAGTCCGCTGCCGTCCCCGTTGGGAGACGTCGAAGTGGGGATAGGCGTCAGCGGGATGACTTACAATCATTCCTCTTCGTTTACGTCTCCGAGACCAGAAACGTTGTTCCAGGAAGATATCGACAATATTGTTAAAAGCCCGTCGCCCGAAATATGCATCACTAAAGAGACGAGAGATAAGATGATGGGAGTGAAGTTAGAGCCTCTTATCGATCACGATTAG
- Protein Sequence
- MWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIYSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSMDGGADLRPKGRGRPQRILLGAWPEEHIRGVLRTVVFRDTAGHIKEESQIGYASPHPMSNYSLSNGPEQSVSPTSAAAAAVAAVAQGLRQQMCSMVAAAQHHAQLDPSLLAHCGLQSNGALGMRLPSSPSSPTESAGSPLPSPLGDVEVGIGVSGMTYNHSSSFTSPRPETLFQEDIDNIVKSPSPEICITKETRDKMMGVKLEPLIDHD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -