Bput023957.1
Basic Information
- Insect
- Brachyptera putata
- Gene Symbol
- lov
- Assembly
- GCA_907164805.1
- Location
- OU015464.1:9013835-9021622[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-18 5.8e-15 55.7 0.0 1 44 459 502 459 503 0.96
Sequence Information
- Coding Sequence
- ATGGCGACGCCACACTACAGCTTGCGATGGAACAATCACCAGAACCACATCCTCCACGCGTTCGACACGCTCTTGCAGAACGAGACGCTGGTTGACGTCACGCTAGTCTGCGAGGAGACGAGCGTCAAGGCGCACAAAGTCGTCTTGTCGGCGTGCAGCCCGTACTTCCAGAGAATCTTCTCTGAGAACCCGTGCAAGCATCCGGTGATCGTGCTGAAGGACCTCCAGGGCTGGGAGGTGCAAGCAATCGTGGACTTCATGTACAAGGGAGAGATTAGCGTTGGCGAAGAGCAGCTCTCGTCGCTCATCAAAGCGGCAGAGTCGTTACAGGTGCGAGGTTTGACCCACACAGACACGGTTGTCTCTGAGAAGGAAAACGCACACTCCACGTCCTACTCTCCGCCGCTCGAGAAACTCGGGGTCTTTCCAAACCACGTCCGCACATTTGCCTCCCACCAACACGACAAAGATAACGGCCTGACGATACTATCGCCGTTCTCGCCTCCGTCGCATTATGAACCGTCTGTCAAGTTGCCAGTACTGCCTCACATGCCGCATATCTCGTTTTCGGAGAACCCGCTCCCGCCCGGTGATCACACGTCGCCGCAACCGAGGAGGAAACAGGCAAGGCCGCGCAGACGATCAGGTGACTTGTGTGGCGCCCAGGACTTATCGAAAGGTCCGTCGACACCGCCTCAACTAGAAACTGCCGAGAACTTGTCTATGAAGAAGTCTACAACCCTTCAGCCTCTAAACAACAACATTGTCAACAACAACAACAGTAGCAACAACAACGTTCATCATGTCAATCATCAACTGCCTCAACCTCAGCTCGCCCACAGTACGCCCGTATCGTCGCCACATCCACCGCCTCCATCATTCAAGATTGAGTCGGAAGAACAACAACAGCAACTGGCAGAGAACGCTAGGGAAAGCATGCACACGCCAGAGCAAGAACGAGAAAGAGAAGGGAGAGAACGGGGGCGCGACCGAGAGAGAGACAGAGAATCACGTGAGCGAGAAAGGGATCGAGACAGAGAGTCGCGCGAACGAGAGAGAGAAAGAGATCGAGCAGAGTATTGTAATAGTCTCGAGTCGCTGGGGTTAACGCCTCAACCACCGGATTCTTCTATGGATAATTCTAGCTTTCCTCACCTCCCGTCAATGTCTGCTCTGTCGTTAACACCACCACACATGTTTTCATTGGATTCTCCTCTCGGCTTTTTCCCCGGCATGGACGCATGTCGGAATCCGTTGTTGAACGATATTCACCAAGAGCCAAGGAATGACAATCATCATATCATGGGCAAACGGAAAATGGGTCGCCCAAAAGGTCAACACAGCGCACCCCGCGGAGGTCCCCCAAGGTCGTGGACCAATGCTGAGCTTACCGAGGCGCTGCAACACGTTTGGAACAAGAAGATGACAACGTCGCAAGCGTCGAGAATCTTCGGCATCCCGTACAACAGTCTACTAATGTACGTTCGTGGCAAGTACGGCAAATCATTAAAACTCGAGCAGCTCAAGAAGGATTGTCTCGGGAGTCCAGGAGGACCATTAGAGCTTTTAGGACTCGGTCCAATGGGCCCAATAGGAAGTAACAACAACAACAATAACACCGGTAAGTCGAACCATCCAGACGATCTCGGTATCCCGTCGGAACACGACTTATTACCGCACGGTTTCAACCCGTATTCGGCGGCAAATTTCTATCCGGATTTTACCGGATCGTTCCCCATTCCCGTCAGCATGATTCATCTGTTGCCACAGTCGGAGAAGAATCGAGAGCTGTTCGCCCACGGCTTGCCCCACCTTGTCGACATGTCGCCGAAAGACGAAGATTGCAAAAGTTCGAGCGGCAGACGTTCGAGAGATAATAATAGTTCGGGCGACGAGGATAGCGATCTCATTCACCCGCAAATACCACTACCAAGGGAAGATATAACACAGCTCATAGAGCAAAACGGACAGAATTAA
- Protein Sequence
- MATPHYSLRWNNHQNHILHAFDTLLQNETLVDVTLVCEETSVKAHKVVLSACSPYFQRIFSENPCKHPVIVLKDLQGWEVQAIVDFMYKGEISVGEEQLSSLIKAAESLQVRGLTHTDTVVSEKENAHSTSYSPPLEKLGVFPNHVRTFASHQHDKDNGLTILSPFSPPSHYEPSVKLPVLPHMPHISFSENPLPPGDHTSPQPRRKQARPRRRSGDLCGAQDLSKGPSTPPQLETAENLSMKKSTTLQPLNNNIVNNNNSSNNNVHHVNHQLPQPQLAHSTPVSSPHPPPPSFKIESEEQQQQLAENARESMHTPEQEREREGRERGRDRERDRESRERERDRDRESRERERERDRAEYCNSLESLGLTPQPPDSSMDNSSFPHLPSMSALSLTPPHMFSLDSPLGFFPGMDACRNPLLNDIHQEPRNDNHHIMGKRKMGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLKKDCLGSPGGPLELLGLGPMGPIGSNNNNNNTGKSNHPDDLGIPSEHDLLPHGFNPYSAANFYPDFTGSFPIPVSMIHLLPQSEKNRELFAHGLPHLVDMSPKDEDCKSSSGRRSRDNNSSGDEDSDLIHPQIPLPREDITQLIEQNGQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00243066;
- 90% Identity
- iTF_00242369; iTF_00243066; iTF_00243409;
- 80% Identity
- iTF_00242369;