Basic Information

Gene Symbol
XBP1
Assembly
GCA_907164805.1
Location
OU015464.1:12463057-12465582[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.7e-16 9.1e-13 49.0 16.7 2 63 43 104 42 106 0.95
2 2 0.013 25 5.9 0.5 36 54 91 109 90 115 0.67

Sequence Information

Coding Sequence
ATGATGATATCCTCATCCTACAGTTGCATCGAAACATCTGGTTGCGGTTTGTCGGGTTCTGTCTTTGTAATGGATGGCAGTCCACCAAAGCCGAATGTAAAACGAAAATTAGATCACTTGACCTTGGACGAAAAGATTAAAAGGAAGAAGCTGAAGAACAGAGTAGCTGCTCAAACATCTCGAGATCGTAAGAAGCTGCGAATGGACGAACTGGAAGCTGAAATTAAGGAGCTTAAAGAAAACAACAAGAAATTAGTTTTGGCTAATAACCGTCTAAAAACACAAATGGAGAAGTTATCATCTGAGAATGTGGAACTCCGGGAGAAATTCACAAATCACAAAGCTATTGAGTGTTGTCATCATCAGTCCCCTGATGTCACCTGCAGACCTGGTTTCTTAGGACCAGCCGCGTCCCCTCAGCCGAAGGGAATACCGGGTCTGCAGCGGGCATCGGGACTGAAGACCGGACAGCATACGATTGCGATATGGAAGATTTTGACTTTCTGCATTCTCTCCCAGATCTCCTCGCAGACTTTCAAGAAGACGAGTCAATTGACCAACTTGAAGAACTTGCAGCAAGTTTGCTTCGAGAAGCTTTTGTTGACGAGTCAAGGGAGCTTTCACAAGCGGATATTAAGGCTTCAAGAACATGTAAAGAACAATTCGGTTCCACTGAAATGGTGGGGACGCCATCAGAAAACGTGGAATCCTGTGGACTTCTTAATTCGGAAATGA
Protein Sequence
MMISSSYSCIETSGCGLSGSVFVMDGSPPKPNVKRKLDHLTLDEKIKRKKLKNRVAAQTSRDRKKLRMDELEAEIKELKENNKKLVLANNRLKTQMEKLSSENVELREKFTNHKAIECCHHQSPDVTCRPGFLGPAASPQPKGIPGLQRASGLKTGQHTIAIWKILTFCILSQISSQTFKKTSQLTNLKNLQQVCFEKLLLTSQGSFHKRILRLQEHVKNNSVPLKWWGRHQKTWNPVDFLIRK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00242898;
90% Identity
iTF_00242898;
80% Identity
-