Blap024211.1
Basic Information
- Insect
- Brachypalpus laphriformis
- Gene Symbol
- -
- Assembly
- GCA_945910015.1
- Location
- CAMDTZ010000815.1:1079726-1080461[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-09 3.6e-06 28.5 0.0 1 42 16 57 16 60 0.93 2 2 4.8 5.3e+03 -0.8 0.0 27 44 105 123 105 124 0.81
Sequence Information
- Coding Sequence
- ATGGAAAAATCTGAAGGACGGCCAAAACGTGCTTTCCATAAGTACTCAGAAGAGGCACTTAATGAGGCCTTGAAAAAGATCAGGGAGGAAAATTGGCCAATAAGGAAAGCAAGCAAGGAATTCCGAGTCCCTAGAACAACAATCCAAGACCGAATCCATGGGAAAAATTTTGGAAAAACCAAGACAAAAGGGGCCGGATACTACTGGCTTTTGAACTTAGCAAAATGTGGATTTCCACAAAAACCAACAGATCTGCTAAACAAGGTGCAAAAAATAATTTTAGAAGAAAATCGAAAAACACAATTCAAAGACGGTCTACCAGGAAAGACTTGGTACTACGAGTTCCTAAAGCGCCATCCTGAACTGTCCCTCAGAACACCAGACGGACTCTCAAAAGGTGGGGCGGTAGTCACCGAAGAGTCCGTCAGGAAGTGGTTTTCAGACCTAAAAAATTATCTGCAGGAAATTGATGCTGCAGATATTCTTGAATACCCTTCCAGGATTTTTAATGGCGACGAAACATCGTTCAGCATGTCTCCGAAATCTGGGACTGTTTTGGCACCTAAAGGCTGGAAAAACCTTTATAAGTTTAGCCAAGGCAACGAAAAGGAGACAGTCACTGTTTTGTTTCTTTTTAGTGCTAATGGTGAAACTTCACCCCCTTTAGTCGTTTTCGCATACGTCCGCCCCACACAGCTCTAA
- Protein Sequence
- MEKSEGRPKRAFHKYSEEALNEALKKIREENWPIRKASKEFRVPRTTIQDRIHGKNFGKTKTKGAGYYWLLNLAKCGFPQKPTDLLNKVQKIILEENRKTQFKDGLPGKTWYYEFLKRHPELSLRTPDGLSKGGAVVTEESVRKWFSDLKNYLQEIDAADILEYPSRIFNGDETSFSMSPKSGTVLAPKGWKNLYKFSQGNEKETVTVLFLFSANGETSPPLVVFAYVRPTQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00241391;
- 90% Identity
- -
- 80% Identity
- -