Blap030940.1
Basic Information
- Insect
- Brachypalpus laphriformis
- Gene Symbol
- -
- Assembly
- GCA_945910015.1
- Location
- CAMDTZ010001135.1:228852-234344[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-11 1.9e-08 35.8 0.0 5 38 19 53 16 56 0.90 2 2 0.19 2e+02 3.7 0.0 7 25 115 136 114 136 0.85
Sequence Information
- Coding Sequence
- ATGAGTCAAGAAATAGGTGAAGAAGAATCACAAGAACTTTCACGTACGCAAAGAATCGAACTTGCTCTAAAGGAAATCCGTGAAAACAAATTAAGCCATAGAAAAGCCGCTTCTACATATAATATTCCAAGGAGTACCCTTCAGGATAGAATATATGAAAAAGTTGACGACGATTTCTGCCCACTTTTAGAAACAGTCCTCTCCAATAACAACCAGTTGGCAGAAACCATTAAGAACGGATTTCGGAAATGCGGACTTTTTCCATTCGATTCTAATGCTGTGGACTATGGAAAATGCGTTCAAGATGTAATGGAAAGCTTTACTGCACAGCCTACAGAAGTTGAAGCCATAGAACCTGTGCAACTAGCTAAAGAAGATAGATTCTCCATTGCAAAAGCTTGTCGGAAACAGAATTGTATCAAGGGCGAATCGAGCTACGGTAACTCTGCTACTATTGGAGAAAATTCTTCAGCCCAATCAATACCTCCGGATACCCCAACTACTTCAAAAAGATATCCTCTCTCCCCAATACCTTTAAATAAAAGCAATATTTTTAAAACTACAGGATCCACCACATTCAATTCACCATCACTTCAAAAACCATTTTCAAATCTAAAACAAATTAATTCAACAGAAAGCAGCCGATCCTGTTCGCCCTGCAGATCAAGATCTCCGCTTCGTTTATCGAAACATTTATTTTACCCAGACCCTATTAAAAAGAAAAATACTACACAGGCTTGCCGATTTCCCAGTGCAATATCTTCACAGGCTTGGAGGGATATCTTTAAGCGTAAGGAAAAGGCCAAGCAAGAAAAGATTGATGCGGTAGAGAAAAGGAAAGATGAAAGGTTACGAAGAAAAAAAGAAAAGGAAGCACAAAAATCATCTGGACGTAAAAGAAAAACCGAAAAACAAACCATTAAATGCAACAAATGCCAAGAAATTCTTATAAGCGATGCTGAAGAAGACGGTCTCAAAAACATAGCTTGCGATATTTGTCCTTTGTGGTATCACCTTAAATGCAGCTCCATCAGTTTTTTGCCATATGAAGACGCTATGCACATGAAATTCGTTTGTGATATTTGCCTGGACTCAAATACATAA
- Protein Sequence
- MSQEIGEEESQELSRTQRIELALKEIRENKLSHRKAASTYNIPRSTLQDRIYEKVDDDFCPLLETVLSNNNQLAETIKNGFRKCGLFPFDSNAVDYGKCVQDVMESFTAQPTEVEAIEPVQLAKEDRFSIAKACRKQNCIKGESSYGNSATIGENSSAQSIPPDTPTTSKRYPLSPIPLNKSNIFKTTGSTTFNSPSLQKPFSNLKQINSTESSRSCSPCRSRSPLRLSKHLFYPDPIKKKNTTQACRFPSAISSQAWRDIFKRKEKAKQEKIDAVEKRKDERLRRKKEKEAQKSSGRKRKTEKQTIKCNKCQEILISDAEEDGLKNIACDICPLWYHLKCSSISFLPYEDAMHMKFVCDICLDSNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -