Blap005877.1
Basic Information
- Insect
- Brachypalpus laphriformis
- Gene Symbol
- -
- Assembly
- GCA_945910015.1
- Location
- CAMDTZ010000166.1:596446-602465[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.2e-13 6.8e-10 40.4 0.0 4 41 642 680 639 683 0.85 2 3 7.2 7.9e+03 -1.4 0.0 28 37 713 722 712 726 0.85 3 3 1.9e-08 2.1e-05 26.0 0.0 3 39 751 787 750 793 0.86
Sequence Information
- Coding Sequence
- ATGATAATACTTGCAAAAAGGAAAGGCACTACCCCGCCAGGCACTACCACTGTTGTGCATGGTACTGATCCTGGACCGAGCAGAAATGTTCGGGTCAGAGCTATACGGATTCCGGGGGCTAGCAACATAATGAAACAGTTTGGACGCAATTTAGGGGTCGCGAGTTGGAACGTTGGAAGCATGACCGGTCGAAGTTACGAGCTGGAAGAGATGATGAATAGAAGGCGGGTGGACATCTTGTGTGTCCAAGAGACGAAATGGAAAAACACCGGGAATCGGGGGCGTTTCTTGGACGTTAGGACAAAAGATTACAAGATGTTCTACTACGGAACGGAAAAGGCTAGGAACGGAATCGGTATCATCCTTGCGGCAGAGCTACTTGGAAACGTCTTGAGCATTTCGAAGTCCAGCGACATCAAACGAGAGGTGTGGAATATTGTCAGTGCATATGCTCCCCACGATGGGTACAATCAGAGAGATAAAGATGCATTTTGGCTAGATTTCCACAATCTCCTTAAGGACATCCCAAAGGAAGAATTTCTGTTTGTTGGAGGAGATTTGAATGGACATGTCGGGAAATCAAACGAAGACTATGAAGACTGCCATGGAGGACTAGGATATGGCACCAGGAACCTTCCTGGTGAAGACATCCTAAGCATGTGCAAATCACACGGTCTTATCGTGTTAAATACCATGTTCATCAAACAAAGCCGACACCTGATCACTTACAGCAGTGGTGGAGATGAAACTCAGATTGACTACCATTTGGTAGGCAGTTTCATGAAGCCTCGGGTAAAAGATTGCAAAGTGATCCTGGGAGCGGCAATCGCTCGACAACACCGTCTCCTGCTAACAGAAATTTTTATGAAAACAGCAAAGAAAAGCAAACAAACAAGGGTCTCTGAGAAAATCAAGTGGTACAATCTGGACAAAGAAAAAGGCGAGGCTTTTGTTTTCGTAATGAAAAATTACCTCTCTCACACCATCAACGGAGCTGAGGATGAAGAGTGCAGAGCACAAAATATGTGGGATTCCCTACAGCGAACTTGCTTAAAGAAGGCCAAATCACTGCTAGGAGCTTCAAAAGGCCACCATCAACACGCCAAAGAAACATGGTGGTGGAGTGATGAAGCTAAGAAAGTGATAAATGAGAAGAAAGCGGCTTTCAAAGCTTGGTCAAAGTGCCCCTCTAATAATAGTGACGAAAAAGCTCGCCTCGAAATGGAATACAGATGCTGCAAGAAAAAAGCGAAGAAGAAGTGCGCTCAGCTTCAAGCAGAGAGTACGGAGGGCCTGTATCGGGAGCTGGAGAAAATATTTTCCCCGGTTGCTGATGCAAACCAGGCTATCCAGGAGCTGCGAAGACACAATATGAACAAGAGTGCCACTATCTTCAAAATAGCCGCCCAAAGAAGGAAGAATGCTCAGAAGATTCGTTCGCCAAACTTCATTAGCAATGCTCATGGCCAGCTTCTTGTGGATGACGACAAAATTCTGCAGAGGTGGCGGCAGTATTGTGAAGAGCTTTTGAATGAACAGTTTCCCCGGCTATACTTTCCAAGAGCCACCCCTAACTGTGAACAAACACCCGACATTACAGTCGAAGAAGTTAAATCAAATGCCGCCCCGCCTGCTGTATTAATAGATGACTCTGTTTCAACGAATGATCAGTATATAATATTCGAACTGAAAACTGACGCGGAACCCATGTTTAACTACGTCATCACTCAAGTAAAGAAACCACCACCCGATGATGGGGATCCCATTCAAAATGCCTCCTCTGGTCCTGTGGAGAATCAAAATAATCCTGGACCGCAGCAGAATACCACTCCATATGTGATAACTGTACAGATACCACTCGAGGGTGATGAAGAAGAGACCAAGGAAAATTCGAAAAAAAGTATGCGTGCTTTAAACCGGAAGAGACTTCTAGAAGCGGTAGATTCCGTAGTCAACAAACAGATGACCATCAGTAAGGCTGCCACTGTTTTTGAAGTCACAAAGAGTACCCTCTGGAGGGAAGTAAATAAACACACAAATCATCGCCGGAAGAAAGTCGATCAAGAGTTACATCGCAAGATCGCTGATCGTATTTGCGCTGGCGAAACACTCTCGGGCATATCGAGATCCTTAAAAGTGGCTAAATCCACCTTACATCAACATAAGGTTCGACTAGCACAGAGCGGGCAGCTACCATCAAATGTGAAACTTAGACCACCTGTAGATCCATCAGAGCGGTACGCCATGAAGGAGCGTATTATACAAGCGTTTCGTGGTTGCCGGGTAAATGGTATGTCGATACGTTTTGCGGCGAAATTTTTCTCCATACCTCCGACGACCCTATGGAAGTATATACGACGTTTTAAAGCTTCACAACAAAGTGTAGATGCCGATGCAGCAGGTCCCGCGGATGAAAATGTTAAAGATATCAAAGAAGATGTTTCAGAGGAGCAATCGAATAGTAATGATGAGACTGTAGACTTAAGTGACTTCGATGTAGACGCCTACTGTGAGCAACAAGAGGAGACTGCCAGTGAAGATGGTGACTTTTTGATCAGTTTTGACTTTGAAACGTTCGAGGAGTTTGTGAAGAGAGAGCTCGACTGA
- Protein Sequence
- MIILAKRKGTTPPGTTTVVHGTDPGPSRNVRVRAIRIPGASNIMKQFGRNLGVASWNVGSMTGRSYELEEMMNRRRVDILCVQETKWKNTGNRGRFLDVRTKDYKMFYYGTEKARNGIGIILAAELLGNVLSISKSSDIKREVWNIVSAYAPHDGYNQRDKDAFWLDFHNLLKDIPKEEFLFVGGDLNGHVGKSNEDYEDCHGGLGYGTRNLPGEDILSMCKSHGLIVLNTMFIKQSRHLITYSSGGDETQIDYHLVGSFMKPRVKDCKVILGAAIARQHRLLLTEIFMKTAKKSKQTRVSEKIKWYNLDKEKGEAFVFVMKNYLSHTINGAEDEECRAQNMWDSLQRTCLKKAKSLLGASKGHHQHAKETWWWSDEAKKVINEKKAAFKAWSKCPSNNSDEKARLEMEYRCCKKKAKKKCAQLQAESTEGLYRELEKIFSPVADANQAIQELRRHNMNKSATIFKIAAQRRKNAQKIRSPNFISNAHGQLLVDDDKILQRWRQYCEELLNEQFPRLYFPRATPNCEQTPDITVEEVKSNAAPPAVLIDDSVSTNDQYIIFELKTDAEPMFNYVITQVKKPPPDDGDPIQNASSGPVENQNNPGPQQNTTPYVITVQIPLEGDEEETKENSKKSMRALNRKRLLEAVDSVVNKQMTISKAATVFEVTKSTLWREVNKHTNHRRKKVDQELHRKIADRICAGETLSGISRSLKVAKSTLHQHKVRLAQSGQLPSNVKLRPPVDPSERYAMKERIIQAFRGCRVNGMSIRFAAKFFSIPPTTLWKYIRRFKASQQSVDADAAGPADENVKDIKEDVSEEQSNSNDETVDLSDFDVDAYCEQQEETASEDGDFLISFDFETFEEFVKRELD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -