Basic Information

Gene Symbol
JARID2
Assembly
GCA_945910015.1
Location
CAMDTZ010003162.1:13520-19945[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-22 3e-18 67.9 0.0 6 89 1676 1757 1671 1757 0.92

Sequence Information

Coding Sequence
ATGTACTTTAAATTTAGTAATATATGTTTTTTTTTTATTAGGACTAAAGTGCAGGCACAAAGAAAATTCGCTCAAGGTCAGAGTGCACCGACATCATCGTACAGTTCAGCATTGGCATCATCTTCAAATGCAATCGCTAGTGGCAGTACATCTTTGGGTAATTCATCGATTCAAGAGAGCCGAGAGCCTCCCACAGAAATATTACCCAACAAAAGGCCGAAAACTGAAGACTTCTTAACATTCCTTTGCTTTCGAGGTACATCGGCCTTGCCGGCTCATTTAGATTTCCTAAACCAAAATACACCTCAAACTCCAAAAGATGAATCTCCAGTAAATCAAGATGAGAAAGCTAAAGAGGATGAAGAGTCTCCAGCAAAACCGAAATCTACAAGATCGACAACCACCAAAAAGAAGGAGAAGAGTGCAACAGTAGACGAAAGCTCTACATCAACGGTGAGCGTGAAGAAGCCTGAAACCAAAAAATCCATTGGAAAGAAAAATGATGAAGCAAAAGATGCAAAACTGATAGCATTTGCTGTCAGGAAAAGGGCAGAGCAATTACCCGAAGGCAATCGTCGTGGCAGACCCTCAGATAAATCAAAAGAAAAACTGAACAAATCCACTGAAGGTAATCGTCGATCTGTTCGAAACAGAGACATCACTAAGTCCCTGGCGGAGCCGGATGATAACGAAACAGAAAATAATGATATTGAAACAGTGTCAATCGAAAGTGGACAAGATATCACGAAAATAGACAAAACTCCGCAACAGAAGGGCAAACGAGGAAAGCCTGCGAATTCGGCTAAGAAGAAACAAGAAACAAGTGCGACTGCCACACCAGAGACAACTCGAAATCAAGATGCTATCATCGAAAAACCAGAACCGCCCGAACCTGTTCCACAAATTAAACCGACGCAGCCCAAAGAGAAACCTATAAAACGACCACGCCAAAAAGAAGCTCCCATATTTGTTCCCTCCCCTGAACCAACAGGACGCATGACACGCCAGCGAGCGTTTTTTGAACCAGTAAAAGTAATACGCCGTGAGGAAAATGATGAAGATTCTGAAAAGAAAAAAGAAAACGATGAAAACATGATCAAAGTACAACCGCCTGTGGAATTGGTGATTGACAAAGAAGCAGAAATTACTTCAGGTAAAGATGTTTTTGATTTCTCCTCAGAAGATGAACAGCCGCTGGCAAAAGCGATCAAACTAAAAAATACAAAAGTAGCTTCAACAAGAAAGTCATCGCCAAAAAAGCAGCAAAAAACACCTATCAAAGGTAAGGGAGCTACATTGAGTGCTGATATTGCTCAATTGAGTGATGATATTGTTCCAAGCATCCAATCAACAGAAAATGTGAAAGGCAAGAAATCCTCCTCTACAACCGATAAAGAACCAGAAAAACAACAAACCGAAGTAATTGATAAAGCGCCAGTTCCAGAGAAAGAGGAAGAAGAAAAGGTCTTACCAGAGAAGACAAAAAGGACACCTGGAAGGAAACCTAAGAAAAAGTTAATCGAAGAGCAAAGTGTCATATCCGAAAAAAGTTCTAAATACTCAGTCGAAGTAGCAAATAAGAATCTTAAAAAGCTAGAAGCTGAAAAGGAGAAATCAACTGAAAGCACTAGTAAGGCGACACCGATAGCAACAGCATCACGACAGAAAAAGAAATCACCAATATCACAAGCAGCACCAAATTCCCAAACGCCTGATATTTGCGAAAATGAAGCTCGAAGCGTGCGACCCACGAGAAAAACTAAAGAAGCTGCCACAATTTACATGGGAATCATCGGCCAGAAACTTCAGCAGGATGAATTCGAAGACGACGAATTGTCCCTGAATAGCTTTCCAGATCTGCCAAATGTAAAGGAGATGGAGAAAATGGAGACGGAACTTAAAAAGAATGTCGATCAAAACAAGCAGTCAAATAAACAACCATCAGTGAGCGACTGCCAGAAGGTCGAAGAGAATCAACCGCTCAAATTAAGCGAAAAAGTACCGGCAAGAAGGGGGCGTCCGCCTAAAAATGCAGCTGTTAAAAACAGCAAACAAAAACCCGCAAAACCCTCTCAAATAGAAGGAATGCTTCGAAAGAGGGAGGCACCAAAACCAGAGGACAGAGACGAAAAAGAAGACGAGGAAGATTTCCTAATCAATGAAGAGGTCAATGAAACCAAAAGAAAACTCGAAAAGAGCTTTAGTGATTCAGACGACGAACCGCTCGCTATAAAACTAACGAAGAATAGTGAGAAGGACTCGGAACATTCAAAGAAATCTGACATCCCTCCGGTAGTGAAGCTCCCAACCGCTAAGAATGAGCGCGCTGAAGAGCCGAAGCCAGCACCGAAAATGTTAAACCTTCTGCCACTCACAACACCAGCCCCAACGTTGCAGTGCAATGTTCCGACATCTAGTATTGTGAATCCTCCGTCGTCAGAGAGCAAACCAAAGTTGGACGATAAACCAAAAATGCCCACCCCGCTGCCAGCACCTGCTCCCCCGTATATACCACGGCAACCTGTCGTCAAATCTCCCCAATCTCAACCACCATTACCCCCGCTACCCCCAACTATAAAATATCAAACTCCGCCTACTACATATCCACCCCCCATTGAAGCATATCCGTCTCCAAAAATCAATCCAAACTTTCTCACTCCGAAATTCGATCGAAATATTGATCGACGCATAGTATGTCTCGACGGTTCCTCTTCGCTGTCAACTCTGCAGAGACCAAGCAGTAGCTTTCCGTCACCGTCTCCGGTAAAATATGACATGTCTACGCCGAAAACCCCAAGCACTTCTAACGCGAAGATACCTATTGTGCCATCTACAGCGTCGTCTAATGCCCCGTCAGCTGATCCACTTAAAGATGAAATAGGAAGCATTCTTGCCGCTAATCTAATGCCAAGCAAAGAGGAGTCAGGCAAGATTTTTGGAATTGCCAGTGTCAGTCTGGCACAAAGCTCTGGTCCAGATAACACAAAGTGCACACTGGGCAAGTGCGGATCGATCCATAAGCCAGTATTAGGCCCTGTTGTTCCAACTGAATCCTATTTAGGCGAACAGCTTTCGAGTAAAGAAAGACGTAAAGCCAAAGTAAACATGACACACGAGCAAATCCAAAAGTGGTTAATTGAATGTTCTTCGAATCCTGATGAAATTCAGGATGATTTGGACGATGATTTTGATGACAACCTGCGTCCGAACATATACGCAACAACGCCTCCGCCTACCAGAGATGACAAGGAGAGCACTTCATTTAGTTCTTCTTCAAAAACTACTAGAGATCTGGGTAAGAGTGAAAGCGCTTGGTCAGGCAAAGGTCCTTCTCTGAAAGCCACACCAGTGGTTCTGCCCAAGGATGATCAGCGACCGGAAGAATGTTCTCTGTCATCTGATGCGCCAGCAAACAAGGAATTGAAAGAAGCTGCCAAAGAGTACCAGGCACAAAAGGCGTCAAATACAAGCAAGAAGAACGACACCATTGCCAAATCGAAGGAAAAAATGAAAATTGATAAAGCAAAAGAGGAAAAGGAAACGAAGAAAGTACAGGAAAAGTCAACAAAGGAAGGAGGACCGCAAAAGGGTGCAAAACCATTGAATTCGACGACCACGACAGCAGCTACCACATCTTCACCCCGGCAACAAAGGAAAGTTGATGAAAGTAAAAATAATTCGGGACCTTCTCAAGCCTCTAAACTGGGAGCAGGAACGTCAACAGTTGCGCCTAGAACGCCGAAAAGAACAACAGTATACAATTCAAAATTAAAGGAATCTACAACAACGAGTCACAAGAAAAAGGGTCCGTTTTCCTATACGTTCGGCGCTTTTTCAGCAGATAACGAGAAGAGTATTTATTCGTTTGATAAAGAGGATGACGAAACCAAATTGCCATTATCCAAACCATTCCGAAGGCAAAGTCGTCGTGAATCGCATACTGAAGAAACTACTACCCAAAACGAACCGCCTTCACAGAAGAACGCTGCGGATAAAAAAGAAGGCAATGCATCACAGACCAGTGTATCGGTCACGCTCAGCCCTGAGGAGAATAGTAAACTTGTAAAAGTGAGTCTTGAATCCGAACAAAGCAAACCACCAGCAGAGACAGCTGAGAAACCTAACGAATTTAACTTGGGGGATTCCGATTCAGATATTCATACATTCTACATACCCCTTCAAGGGGCTGGAGTTGGAGGAAGCAGCGAAGGCAAGGCGGACCTTATCCAAGGAGTTGCTGTAAAGCTCGGTCGAGAGGGACCCGATGGCCCCAATCAAAAAGTTGTCATGCATGCTACTTTGGTAACAAAATCCCAGATGGGATCGAATTCTAAACCTCTTCCCGATTCCATGAATGTTTCGGAGATAGTCAAGAATCTGCTCAGTTCCGCTAATATGACAAATAACAAAGATTCAGGTACTGTGACGCCAGTAACAGCCCCGACAACATCTGCTCTGGCAGTGACAAGTACCGCTGTTGCAGTAGCTGCCCCGCAGCAAAGTACATCAAATGTACAGAATGCAACAGCTGGTACATCTTCCTCTGTGGCAGTGGGTAGCTCTAAAAGTGTACCCGTTGGTACAGTACAACCCAGATTCAAGTCGGCCGAATCCACTGCCACGCAACCAAATCATCCATCTGGTTCTGGTGGCGGGGGAGCTTTAACGCGTGTCAATTCAAACTCGTCACTCTTTTCCGGCTCAAATAAATCACGCGGTCAATCCAGTAAGAAGATCAAGGACGACACACCCATAAAAATGTGCAATAATACAGCTTTTCCTCGTCACGATGATCCAACACAAATGGTGGAAGCTCCAATTTTCCGCCCGACCGAGAAGGAGTTTCAGGATCCCATGGAGTTCATCGATAGGATCACACCAATTGCCGCACGTTTTGGAATATGTAAGATAATACCACCAGCAAGTTTTAAGCCGGAATGCCGCGTTTCTGATGACATGCGCTTTACAGCATACAATCAGTATGTCCACAAGATGCTACACCGTTGGGGACCCAGTGCAAAGGAACTGAGTGCAATTAAGAAATATTTGGCCACACAAAGCATTGTGATGAATCATCCGCCATGGATTGGAGGTATGGAAGTCGACCTACCTAGACTTTATCATACCGTTCAGGAATTGGGTGGCCTCAAAGAGGTCATCGAAAAGAAGAAATGGGCTCGTGTAGCTGAAGAAATGTGCATTCCGAAGTTAGCGCAGGATCGCGTAACTAAACTTGATGATATCTATTGTAAATATCTCCTCCCATATGACACGTTGTCGCCAGGCGAACGACAGAAACTGTTTGATGAAGTGGAAGCTGACTGGGCAAAGCGGGAGGCTAGGGCCAGACGAAACGCTGATCGTTTCGTTAACACCGAAAGTGTGAGTAATGAAGATGATGACGTATCAAGTGAAGACGATGAAGAGTCAGAAGAAGAAGTCGACGGAGTATCCATGGAGTGCATTGTGAAAGGTCGAAGTATGCCACTCAGTCAGTTCTTCCGCATTGCTCGGAACACGATGTCTTTGTGGTTTAAAAACACAGAACCGTCTGTGACTGAAGTGGAGGCGGAGTTCTGGCGTCATGTTGCTGTTCGTGATAGTCATGTTTGTGTCCATTCCGGATCGATTGATTCCAGCGGCTGGGGATATGGATTTCCGTCACCTGGTCCCAAAGGAAAGGGTTCAGTGTGTGCACGACATCCATGGAACCTTAAAGTGCTAACAAACAATGCAGGATCTGTGCTGAGATCATTGGGTCCGGTAATGGGAGTCACTGTACCAACACTGCACGTTGGTATGTTATTTAGCGCGTGTTGCTGGTATCGGGATCCACATGGACTGTCGTGGATTGAATACCTGCATACTGGAGCAAGTAAATTATGGTACGGGATACCAGATGATCAGAGTGCAAATTTCCGAGCAGCACTTACTTCACTCATCCCGACACATTGTCAAAATAAAACAATTTGGCTGCCTTGCGATACAGTGATGGTGCCTCCTCATATGTTAACCGATCGTGGAGTATCGTTGTGCCGGATAGAGCAAAAACCTGGGGAATACGTTGTGATATTCCCTAGGGCCTATACGTCGAGTGTTGCAACTGGATATGTTGTCTCGGAAAGTGTTTATTTCGCTACAAGTTCTTGGCTTGAACTAGGCAAAGATGATTTTAGGGATATTCACGATAGCTGTGAGCCGGCCATGTTTTCGTTGGAGCAGTTGCTATTTGCCCTGGCCTCCGACCAGCGCGTAACGGCTGATGTTCTCTCTCAAATGTTGCCTATGATCAATGAAGTATTTGAAAAAGAACTTGCGGCTAGAGAGCAGCTCAAGGTAAGCACATTTTTTTGGTTTTATTAA
Protein Sequence
MYFKFSNICFFFIRTKVQAQRKFAQGQSAPTSSYSSALASSSNAIASGSTSLGNSSIQESREPPTEILPNKRPKTEDFLTFLCFRGTSALPAHLDFLNQNTPQTPKDESPVNQDEKAKEDEESPAKPKSTRSTTTKKKEKSATVDESSTSTVSVKKPETKKSIGKKNDEAKDAKLIAFAVRKRAEQLPEGNRRGRPSDKSKEKLNKSTEGNRRSVRNRDITKSLAEPDDNETENNDIETVSIESGQDITKIDKTPQQKGKRGKPANSAKKKQETSATATPETTRNQDAIIEKPEPPEPVPQIKPTQPKEKPIKRPRQKEAPIFVPSPEPTGRMTRQRAFFEPVKVIRREENDEDSEKKKENDENMIKVQPPVELVIDKEAEITSGKDVFDFSSEDEQPLAKAIKLKNTKVASTRKSSPKKQQKTPIKGKGATLSADIAQLSDDIVPSIQSTENVKGKKSSSTTDKEPEKQQTEVIDKAPVPEKEEEEKVLPEKTKRTPGRKPKKKLIEEQSVISEKSSKYSVEVANKNLKKLEAEKEKSTESTSKATPIATASRQKKKSPISQAAPNSQTPDICENEARSVRPTRKTKEAATIYMGIIGQKLQQDEFEDDELSLNSFPDLPNVKEMEKMETELKKNVDQNKQSNKQPSVSDCQKVEENQPLKLSEKVPARRGRPPKNAAVKNSKQKPAKPSQIEGMLRKREAPKPEDRDEKEDEEDFLINEEVNETKRKLEKSFSDSDDEPLAIKLTKNSEKDSEHSKKSDIPPVVKLPTAKNERAEEPKPAPKMLNLLPLTTPAPTLQCNVPTSSIVNPPSSESKPKLDDKPKMPTPLPAPAPPYIPRQPVVKSPQSQPPLPPLPPTIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNIDRRIVCLDGSSSLSTLQRPSSSFPSPSPVKYDMSTPKTPSTSNAKIPIVPSTASSNAPSADPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYLGEQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDNLRPNIYATTPPPTRDDKESTSFSSSSKTTRDLGKSESAWSGKGPSLKATPVVLPKDDQRPEECSLSSDAPANKELKEAAKEYQAQKASNTSKKNDTIAKSKEKMKIDKAKEEKETKKVQEKSTKEGGPQKGAKPLNSTTTTAATTSSPRQQRKVDESKNNSGPSQASKLGAGTSTVAPRTPKRTTVYNSKLKESTTTSHKKKGPFSYTFGAFSADNEKSIYSFDKEDDETKLPLSKPFRRQSRRESHTEETTTQNEPPSQKNAADKKEGNASQTSVSVTLSPEENSKLVKVSLESEQSKPPAETAEKPNEFNLGDSDSDIHTFYIPLQGAGVGGSSEGKADLIQGVAVKLGREGPDGPNQKVVMHATLVTKSQMGSNSKPLPDSMNVSEIVKNLLSSANMTNNKDSGTVTPVTAPTTSALAVTSTAVAVAAPQQSTSNVQNATAGTSSSVAVGSSKSVPVGTVQPRFKSAESTATQPNHPSGSGGGGALTRVNSNSSLFSGSNKSRGQSSKKIKDDTPIKMCNNTAFPRHDDPTQMVEAPIFRPTEKEFQDPMEFIDRITPIAARFGICKIIPPASFKPECRVSDDMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPGERQKLFDEVEADWAKREARARRNADRFVNTESVSNEDDDVSSEDDEESEEEVDGVSMECIVKGRSMPLSQFFRIARNTMSLWFKNTEPSVTEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSVCARHPWNLKVLTNNAGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEYVVIFPRAYTSSVATGYVVSESVYFATSSWLELGKDDFRDIHDSCEPAMFSLEQLLFALASDQRVTADVLSQMLPMINEVFEKELAAREQLKVSTFFWFY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00314052;
90% Identity
-
80% Identity
-