Basic Information

Insect: Brachyopa scutellaris
Gene Symbol: -
Assembly: GCA_949775065.1
Location: OX459112.1:67203929-67208279[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.052 12 8.1 3.1 2 20 1022 1040 1021 1042 0.93

2 8 0.00099 0.23 13.5 0.3 1 23 1049 1071 1049 1071 0.99

3 8 0.01 2.4 10.3 5.3 1 23 1075 1097 1075 1097 0.96

4 8 2.3e-07 5.4e-05 25.0 2.5 1 23 1103 1125 1103 1125 0.99

5 8 0.00024 0.055 15.5 1.9 1 23 1131 1153 1131 1153 0.98

6 8 5.6e-05 0.013 17.5 0.9 1 23 1159 1181 1159 1181 0.98

7 8 0.00053 0.12 14.4 2.3 1 23 1187 1209 1187 1209 0.95

8 8 0.0001 0.024 16.6 0.9 1 23 1215 1237 1215 1237 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.052	12	8.1	3.1	2	20	1022	1040	1021	1042	0.93
2	8	0.00099	0.23	13.5	0.3	1	23	1049	1071	1049	1071	0.99
3	8	0.01	2.4	10.3	5.3	1	23	1075	1097	1075	1097	0.96
4	8	2.3e-07	5.4e-05	25.0	2.5	1	23	1103	1125	1103	1125	0.99
5	8	0.00024	0.055	15.5	1.9	1	23	1131	1153	1131	1153	0.98
6	8	5.6e-05	0.013	17.5	0.9	1	23	1159	1181	1159	1181	0.98
7	8	0.00053	0.12	14.4	2.3	1	23	1187	1209	1187	1209	0.95
8	8	0.0001	0.024	16.6	0.9	1	23	1215	1237	1215	1237	0.98

Sequence Information

Coding Sequence: atgaCCAGCACTGCCATATCAACGTTCTCGGCTTATAATCCGCCAGTTGTTAGCACACATTGTGGAGAAGTTTATTGCTCTCAGAATCTTGAGTACTTTTTGATAAATTGTACGAAATGCTCACAAGAATTCAACTTACTAAGTTGCAATTTATTCATCAAACACATCAGGGAATGCATACCACCAAGACTAACCCATCCTAGTGATCAGAATCCTGCAATTCCAGAAAATTCCAGCTGTACAGTCAACTTACTGAAGGATGCTTTAAAAAATGATAATATTGATGTTCAAAGTAGTACTGCAAATCATGTGGATCCATTGATGTCCTTAAAAACGGAACTGGTAAAGGAGAAAGATGAGATACCAGATTCGTCAGATGAACAGGAAGTGGAATATCTATCCGATTACCAAGATGAAGATGATTTAACCATAGACAAGATGGTCCGTCGTAGAACGATAGAAGGTGTAATCGATGAATATAAGAAGCACCCAATTTTGTGGAAATCGAATATGGACTCAAACAGTAGTCGAGTGGTCAGGAGACAACATTACAAGCAAATCAGAAAAGCTGTTAATTCTAAGTTCAGGACAAACTATACAGATACTGAACTGCGAACACAAATCATTAACTTGAGGTGCGGATATAGACGGGTActtaaaaagaaagagaaatttGAGAAGTTATTTGCCAACGATCCGAGTATGCGATTCAATGCACAGTTGTGGTACTTTGACAAAATATCGTTTATAGAGGGAACTGGCCATGATGTCGAGATAGAAGAGCTTGAAGATGATAATAATCAAGATGGAAATTCTAAACTAGAAGTTTCCGATTACGGAGAGAAATTACAGTCCTGTGACTCTTCCAATGAACCAGTTTCAAAAGAACCGAAAAGAGAAAAGCGAGAACGACCCAGTTGCAAAATATTAAGTGAACCAAATATTATAACGGATGTTATTGctcaatacaaaaaatatccgTTTTTGTGGGATCAGACGGCGTCCTTATATAATGATAAATATGCGCGAAAGGATGCTTTTCGTCAGATCACAAGTTTTATCAATagaaagtttcataaaaatgtaactGACAAAGAAATGAGGCAACAGATCGTTAATCTACGGAGTGGATACAGGCGAGTTCAACGGAAGAAACATAGAGCCAACTACCGTATAAGTTTGTGGTACTATGACGAGTTGTCGTTTATCGATCGGAAGTCTGAACAAACACAAGAAGATCATATAGAAGACAAAACATTAAGTGAAGAAGTGACTCCATGTGAAGACAAATCTAAAAACCTAAGCCAACAAGCTGTGGATGACACTCAGAACGATAACATGATGGACCAACAGTCCGAAGATTATGGTGATTGTGATGATGCGGCAGACGATAGTGCTTCTGCACGTCGTAAAAGAGATAAGAAAGTAATACTAAGTCTCATCGAGGAATATAAACGACATCCTTGCTTGTGGGATAACTACTATTACAAGACCAGCAATCGTTTTAACCGCTACGATGCGAACAAAGCAATCTCAGCAGCTATCAATGCCAAATTCAACACCACTTTTACCGAAACGGATATTCGAAATAAGCTCGTCCAACTAAGAAGCAGTTATAGACGTGTGCTACGTAACAAGGAAGCTTTCGAAAAGAAGCATGCTAATGCCAAGAGAAAATTCCATCCACAGTTGTGGTATTTCGATAAGATGACCTTTATTGGGGCAACAGAAAGTGATTTCTCGGTGAGTCGTCAAAAGAAAAGCAAATCCAAATCGGGAGATCGACCGGAAGAACATAGAAAAGCAATGATCATTGAAAGTGACGATGAATCCAACGTGGACATGGATTTCTTGCCGGAGGATGATGATGCTACCGAATCTGAGGAGGAAAAGTCAGATGAAGAGGAGCTCAAGCCGAGAGAAAAATCCATAACGAAGAACAGGGAGCTTTTAACGGGTATCATAgaggaatacaaaaaaatacccTTTCTGTGGGCTGTGCAACACTATACCAATGATAATTCAACTCGGAGAAATGCATACGCAAAGTTAGCTAAGAATATCAATGAAAAGCTCAAAACTGAGTTCACTGGCAAGGAAATAAATCGAGAGATCATCAGGTTACGATCTACGTATAAACGTATGGTGCGTAGAAAACGCGAGAATCCAGATGtggaattcaaaacaaaaatgtggtACGCAGATTTACtctctttcattgaaaaaaagCCTGGCGATGTATTCGAAGATTGGCAGGAACCAAATGATGGAATGGATTTCAATTATATCGATGCAAATGAACCGGGAGAGGAAAACTCTTCCCGAAATCATGCTTTAGacgaagacgacgacgacgacgacgagAAAGAACACGTCTTCGAAATCATAGAACTTTACCAATCTGCGCCCATCTTATGGGATATCAATCATCCGCAGCATATGCTTAGAACCGAGCGAAGGAAAGCTATTGAGAAAATAATTGGAACCCTGAGACTCGAACATGATTGCCGACTAACAGTCGAACAATTTCGTTATCAAATTCGTTTCCTGAGAGATTCCTATTTTCGTGCAGTGCGGCATAATATTGCCGAAAAACAGGGAGATCTTAACAGCAAATATACACCGAAGCCATTTTTCTATGATCGAATGTCATTTCTAGCACAGTTTGCTGACAAGAATCCGTTTACAGCTCCATCACTGCAAGCCTCTGCTGAAACAGAACCAAGCGAAGATTTTACTTTTCTCATCGAAAACCGACCACTCATGATGGGCTTCATAGAACTGTACAAGGCCAACCGTTGCTTGTGGGATTTTAAGCACAAAGACAAAAACAATGCGTCGGCTCACTCAGATGCCCACGATAAACTTGTAAACATGTTCTTGCAGAATGATGTAATTTTTACAAAGGAACAAGTTTTGTCAGCGATTGCCTTTCTTCATTCGACcgttataaaaatacaaaagaaatttgaatttcacGACACCAACAACACGAGTGAGCCACCAATTTGGTTTTACGAACACCTCCACTTTCTCGGTAGGATTCCCCGGAACAAGGACAAGTATTGCAATCACTGTGACCAACATTTCCACACATTAGCCGCGTATAAAAAGCACAGAATCGAAATCGCCGGAGACTACCCATACAAATGTGCCGTTTGCAATGCGGGTTTTGTTTCACGTTCGAAATACGCCTACCATCAAATAACCCACAAGGAGCCACATAAATGTGATCAATGCGGGTTTCAAGCGTTCGATAGGCACAATTTTAACGTTCACATGCGCCGACACAAAGGCATTCATCCATTCCGTTGTGAACACTGCGAAAAAGGATTCGTAACCTCAACCGAGCTAAATCGACATATGCGAATGCACACGGGTGAGAAACCCTTTATTTGTCATATCTGCGGCAAACCATTGGCAGCAAACTCTGAATTCCATCAGCATATGAAAAGACATCGCAATCAGCGGGATCACAAATGTGAGTTGTGTGGAAATGCTTTTTATACACCGAAAACCCTTCGAGATCATATGGCGTCACATTCTTCAGAGCGGCAGCATGTGTGCGAAGTTTGCGGTGCGGCGTTTAAACGAAAGAAAACTCTACACCAGCACAAAGCACTGCATTTGGAGAAAAAGAAGCATGAATGCAAAATCTGCGGAAAGTTGTTTGCTCAAAAAGCAGGGGTATACTCTCACATGAAGTCACATGGTCTGATGGTTGGAAGTTGA
Protein Sequence: MTSTAISTFSAYNPPVVSTHCGEVYCSQNLEYFLINCTKCSQEFNLLSCNLFIKHIRECIPPRLTHPSDQNPAIPENSSCTVNLLKDALKNDNIDVQSSTANHVDPLMSLKTELVKEKDEIPDSSDEQEVEYLSDYQDEDDLTIDKMVRRRTIEGVIDEYKKHPILWKSNMDSNSSRVVRRQHYKQIRKAVNSKFRTNYTDTELRTQIINLRCGYRRVLKKKEKFEKLFANDPSMRFNAQLWYFDKISFIEGTGHDVEIEELEDDNNQDGNSKLEVSDYGEKLQSCDSSNEPVSKEPKREKRERPSCKILSEPNIITDVIAQYKKYPFLWDQTASLYNDKYARKDAFRQITSFINRKFHKNVTDKEMRQQIVNLRSGYRRVQRKKHRANYRISLWYYDELSFIDRKSEQTQEDHIEDKTLSEEVTPCEDKSKNLSQQAVDDTQNDNMMDQQSEDYGDCDDAADDSASARRKRDKKVILSLIEEYKRHPCLWDNYYYKTSNRFNRYDANKAISAAINAKFNTTFTETDIRNKLVQLRSSYRRVLRNKEAFEKKHANAKRKFHPQLWYFDKMTFIGATESDFSVSRQKKSKSKSGDRPEEHRKAMIIESDDESNVDMDFLPEDDDATESEEEKSDEEELKPREKSITKNRELLTGIIEEYKKIPFLWAVQHYTNDNSTRRNAYAKLAKNINEKLKTEFTGKEINREIIRLRSTYKRMVRRKRENPDVEFKTKMWYADLLSFIEKKPGDVFEDWQEPNDGMDFNYIDANEPGEENSSRNHALDEDDDDDDEKEHVFEIIELYQSAPILWDINHPQHMLRTERRKAIEKIIGTLRLEHDCRLTVEQFRYQIRFLRDSYFRAVRHNIAEKQGDLNSKYTPKPFFYDRMSFLAQFADKNPFTAPSLQASAETEPSEDFTFLIENRPLMMGFIELYKANRCLWDFKHKDKNNASAHSDAHDKLVNMFLQNDVIFTKEQVLSAIAFLHSTVIKIQKKFEFHDTNNTSEPPIWFYEHLHFLGRIPRNKDKYCNHCDQHFHTLAAYKKHRIEIAGDYPYKCAVCNAGFVSRSKYAYHQITHKEPHKCDQCGFQAFDRHNFNVHMRRHKGIHPFRCEHCEKGFVTSTELNRHMRMHTGEKPFICHICGKPLAANSEFHQHMKRHRNQRDHKCELCGNAFYTPKTLRDHMASHSSERQHVCEVCGAAFKRKKTLHQHKALHLEKKKHECKICGKLFAQKAGVYSHMKSHGLMVGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -