Bscu038103.1
Basic Information
- Insect
- Brachyopa scutellaris
- Gene Symbol
- -
- Assembly
- GCA_949775065.1
- Location
- OX459114.1:109725628-109730923[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.39 92 5.4 3.0 1 23 1208 1231 1208 1231 0.95 2 12 0.00097 0.23 13.5 5.5 2 23 1388 1409 1388 1409 0.97 3 12 0.00048 0.11 14.5 0.4 3 23 1417 1437 1415 1437 0.98 4 12 1.4e-07 3.4e-05 25.6 3.6 2 23 1444 1465 1443 1465 0.97 5 12 2.6 6e+02 2.8 0.1 5 23 1478 1496 1476 1496 0.96 6 12 0.0075 1.8 10.8 3.4 3 23 1503 1524 1501 1524 0.95 7 12 0.13 31 6.8 0.1 2 23 1535 1555 1534 1555 0.96 8 12 7.1e-05 0.017 17.1 0.8 1 19 1561 1579 1561 1580 0.96 9 12 4.1e-05 0.0096 17.9 0.5 1 23 1591 1613 1591 1613 0.99 10 12 0.00021 0.049 15.7 9.0 1 23 1619 1641 1619 1642 0.96 11 12 0.0011 0.26 13.4 4.7 1 23 1647 1669 1647 1669 0.98 12 12 0.0014 0.32 13.1 6.0 1 23 1675 1697 1675 1698 0.96
Sequence Information
- Coding Sequence
- atgggtGGCAATGTACAATGTCCGGTATGTACATTATTCCTGCTTCCTGGTATGGATTTATCCGATCATCTGGAAACACATCCGAAGGAACAGGTCATAAAAGCACTTGTACAGCTGAGCCTTAAATCTGAGGTATCCGAGACAATTACACCAGATGCCCCGaagaaaaccaacaacaacaacaagttaGCTTTCCTCGAGAATGGTGTGAATCATCAGGCTGTCGAAGATGATAGGTCGAACCCGATGTCAGAGATAAGTGGCAGTGGGAGTGGGAGTAATAGTACACCTGTAAAGGTGGTCGTACATGAAACGAGGAGGGATGTAGATGATAATATTGTACTTCCTCCGGTACCTcagaatattttattaaataggcAATGTGGATATCTGTTTGAAAATAATAGTGATAGCAGTAGTAGTAATAATTGCTTTGGACCACCGACACCATATTttcatcatcataatcatcagCAACAACAACTACAACAGCAACCACAACAACCGCATCTTAATCATAATCATCTACATAATTACCACCCCTATAATGGTCACTCTAATGGTGTTAATAACTCTACTATGAGCCAAGGTCCGGCGCAACCTCCATTGCGACTTTTCTCCTATCAACTACCACCCAAACCGTTGCAACCACCGCCTGCCTATGGGGCCGCCATAAGTCAACTACGATCTCAAAATAGCCAAAACCTAATGGTAAACAACATCAATCGCCCATTATATTCACCGGGAAATTTCGCACCAACATCGTTATCACCATCAGCATGCTCATCgccgtcgtcgtcatcgtcttTGGGGACGACACCATCACGTTTGCCGCCACCTCTACCACCGCCACCTTTAAATCAAAGTTATCAGACCAGATTCCCGCATATGGAGACTGCAGCTTTTATTGACACTTGTGACAATAGAGCGATGTCGTCGCCCACAAGAAAAACTATATCGCCACCAATACGACCTCCGCCACAGTTATACCGTTCGCCATTATCCTCCACCGGACAATACTCGCGCCAGTCAAGCTCTCCTTATTCAGTAATGACGGGTTCGCCATCTGTGTTGAGATTTGCTGAGTCTCCAGTAACAGCACACTACTTAGAGCGAGAAAATGGTGACTTTATTGTGCAAGAAACGCCCAAGCACGTGGTAGAGTGCGTTGAAAAGGACGATGGCGAGTTTTCAGTAATAGAACGAGTGTATCACATGCCACCGAGTGTTGTTCAAATCAATGAGGATCAAGAGGATAACTTGTCCGAGCACGGATCCAACAGTGAAGATATGAAAATACTGGAAGACGATCGACCAAGCGGAACATGGTCTCGTGGACGATCACCAGAACCAGGGCAAACTGTCCAGCAGCGACAACAAAAGAAATCCGGGATAACCGTACTCAGTGATGTACAATTAGACTTAAATGAATACCTAGACCTAATGGGAAATATAATAGCTTCCAGCAAGGTGGCTAAGACTCGTactgaaattataaaaattgaaaaattcgaaCCCGAAGAAGTGAAGGACGAATTAGGTGGCATAATATCTCTCGACGAAAAAACCGACGAAGATGTTTCCCAAGAAAATGAAGAGAAACCAGAAGCTAGCAAGGAAGAGCAGGAGCAGCACTATAATGAAGAGGTAATATGTAGCCCTATCGCGATAACAGCAGCGTCTACTTCTGCTACTGCTGTAGCGGAATCATCGGTAACACTTGGAACAACAAGTGTTATACGCTTGGCGGCAAATTCCAATCCAATAAGCAATATacccacaacaacaacaaaagtcGAGGAAGAAATCCAACCACCTAGTATTGATTCACCAGCAATGAAGGATGCGGATGATTTAGAATTAACCAAGATTGCAGAATCAATGCAAACAGGCGATGATACTATTACACCCACAACAAAGGATGAAGAAGTGCTCACGAGCACTGGTGCATCGATATCAGAGGTTAAGGAAAACAACACAACAAAGCTCGAAGATTCAATGCAGGCAACAGAAATAGATATGCCTATAGAAAATGATGTGGTGGAAGATATAGAACCAACGACGAAGGTTGACGAAGCATTACAAACAGCCAACCCAGAAGACTCTCAAGCTCAAGTAATGCAGACAGACAGCCTTGACGATTCAGAACCTCCACCTCAGTTGCTTCTTCCCCATGAAGAGAAACCAGAAAGACCTGAGATAATAGGAAAACAAGAGCAACCCGAAAGACTAGACGTACAAGAAAAACACGAGAAAGAAGTAAAGGAAGAAAGGTCAATAAAAAAGTTAGAGACTCCACCAATTTTTGCGTATCAGCAGCCAATCAAGCGACCCCTCAAAAAGACTACGAAAAAACTGGTTATCAAGTTAAAAAGCAAGGAAAGCGTAACAACTCATCCTGCACCACAACCACAACCACGAACACCAACGCCAACGCCGATGCAAATACCGTCAACGTCAGCTGAAACTACGACATCGGAGCCACAAAAAGAGAAAGTTGTGGCGGAGGCACCTGAAACAACGCAGAAAGAAGAAATAAACAGCATCAAAACAGAACATTTACAGGTGGTTGTTTCTTCAGTGTTCAGAATTTCTCCGCCGCTGTTTGCTGATGCTGATGAGAAACTTCCACCCGATGAGGATATGCAACCATCGACATCAAATGTGATGGCCATAGAGAAAGAAGTCGCGCTGCCGACTTATCCCTCAGAAGGGAAACCCACCGCCGACCTAGCAGCATTCCTTGATCAGTGCATGAAAAAGGAAGAAGTAGAGGAGCACCCAATGCACTCGATATTTGGCATGGAAATCCCGAGTACAGCGGAGACACTGGACAATGTACTGACTCCGCAAGCACCGCCAGGGTTTCCATCGGCTTCTCTTTTTTCCAAGCCATTAACTAGCTATGAACAGCTTACAATGTCAGAGTCTGTGCTTCCCGATAGCAATGATGTCCAAGAGCAGGATCAACATCAGTCACAGCCACAGCAGccgcaacaacaaaataactccACCTTTGTTGAATATCCATTTAGTTTTATATACGGCGCCGAAGCGAATCAGCAAGAGCCGAACAACAAGCACACCATCTCACCGCCGATGTACTGCAGTGAAGATTTCAACAAGTACAATGCAAGTACTAGTGGAGGCAACAGTGCCAGTTGCACTTGGTATCAGTCGCAAAGTAGTGAAAACGAATTCGAAATCGATGGAAAAGGTAGCTATTTGGATCTAGATTCGTGCAAACGGAGTGCATCGTTTGCTGCAGCAACAGAGGGAAGTATGCCGACGGCAGACACATTGAACATAAGAACAGATGAGAAGATGCCAGCAAAGGGAGAGATCTCGGAGCAGGAGAGTAATTGTGGTGTAGAGAATTCATGGAGCCAACCGCTATACAATGACTTTCCTGTTCGGTTTCCTAATCATTATCAAAACTTCATGACGACCCACGAGAGCTGGAGCCACGACCACTACTTTCGTCCCCAGGATCTTAGTTCATCCGTGGAGACAAAGAACTTTGGTTTGCGGCTAACCGAGGAATCTCCAATTATGGATGCCCTGCCATCCACGTCAAAGCGAAAAAATAAAGCGGCGGCAAAAGTGCCACGTAAAAAAACCTTCCAGTGTGCGCATTGTAACACACACTTCCCATTACTCAAGGAGAAAAACGCACATTTGATAAAGCAACACGGCTACAAGCGTGTGAATCGACGGCTTATACGTGACCCACCGACTTCAACAGTTACCACGGCTACAATAAATTCAATCGACGCTGGTGCGTCGTTGCTACTTGGTCTGGAATCAAGTGCATTACACCATCCACTGCTGGTCGAGGAGAAGGACTCCAAGCCGGCGATTGTAAAAATCGAGCAGAAAACCCATGAGCGAAAAGATTGCAAGAAAAATATTGCCAAACTCGCACTGACCACCACAGTAACGCCTACAAGTGCAGGTATATCTCGCACCAAGTATGACTCGATGCGGGCACGAGACAATCGCATGCTCATAAACTTCAATTTGAATGCGTTAAATGTGAAAAACGAAGGCGAGGTGCATAGCTATTATATGGAATCTAAATCATCGTTCTGCTGCTTCGTATGCAGGCGGGAATTTCTAACGGTCAAGCTGTTTGATGAGCATTTAGCTGAACACCCCGCCGAGTGTTTCACATGTCACAAGAAGTTCACGAAGTGGAAAAACTTCATGGTTCACCTAAAGCGGCATCTCGGCTGGAAGGACTTTGGTTGCACCTTCTGTGAGAAGAAATTCGTAATTCGTAGCGCCCTCGTTGAACATATGCGAATGCACACAGGCCAGACGCCTCTAAAGTGTAAAATCTGTGGTAAGAGCTTTAAACGCTACTCAAATCTAACACAACACCGCAAGCGACACAGCACCAAAATCAATCGTACCAAAGATTACGTTTGTTACTGCGGCGAGGTGCTGCCATCGAAAGCGCGATTTATCTGGCATAAAGAGACGCACGACTTGAAACCGAAATGCTGCCCATACTGCCGAGATCGATTTGTGCATGCAAACAGTTTGCGACGGCACATACGGCTGGCACACTCCGACAAGTTCGACTACACCGAACCGATGGAATGTCCAATGTGTAAACAAATCTATGCCAAATCCAGCATCAAAGCGCATATGGCGACGCATTCGATGGACACTCAGCACGAATGCTTGATTTGCAACAAATCGTTCAGCACCAAATGGAATCTGAAAATCCACAATTGGGTGCACGCCAATCGCACGACTAAACCCTACAAATGTGATCAGTGCGTCAAAGCATTTGTGCGCGAAGTGGATTACAACAATCACATGAACTCGCACAAGCAGATCAAGCCATACACGTGCGAACATTGCGGCTGCAAGTTCATACGCAAATACAATTATATCCGGCACAGACGTGAGCATCACGGGAATAAAAAATTCACCTGTGATCTCTGTGGCAAACTCTTCCACCGGCACTACTATCTGATCGAACACCGGCGTATCCACACTGGCGAGCGACCATTCCAGTGCACGATCTGTGGCAAGAGCTCCACCACCAAAACCAACCACAACAAACACCTGAAGATTCATCATTCACGGGATCCGTTCACCTCGGAGGCGTAA
- Protein Sequence
- MGGNVQCPVCTLFLLPGMDLSDHLETHPKEQVIKALVQLSLKSEVSETITPDAPKKTNNNNKLAFLENGVNHQAVEDDRSNPMSEISGSGSGSNSTPVKVVVHETRRDVDDNIVLPPVPQNILLNRQCGYLFENNSDSSSSNNCFGPPTPYFHHHNHQQQQLQQQPQQPHLNHNHLHNYHPYNGHSNGVNNSTMSQGPAQPPLRLFSYQLPPKPLQPPPAYGAAISQLRSQNSQNLMVNNINRPLYSPGNFAPTSLSPSACSSPSSSSSLGTTPSRLPPPLPPPPLNQSYQTRFPHMETAAFIDTCDNRAMSSPTRKTISPPIRPPPQLYRSPLSSTGQYSRQSSSPYSVMTGSPSVLRFAESPVTAHYLERENGDFIVQETPKHVVECVEKDDGEFSVIERVYHMPPSVVQINEDQEDNLSEHGSNSEDMKILEDDRPSGTWSRGRSPEPGQTVQQRQQKKSGITVLSDVQLDLNEYLDLMGNIIASSKVAKTRTEIIKIEKFEPEEVKDELGGIISLDEKTDEDVSQENEEKPEASKEEQEQHYNEEVICSPIAITAASTSATAVAESSVTLGTTSVIRLAANSNPISNIPTTTTKVEEEIQPPSIDSPAMKDADDLELTKIAESMQTGDDTITPTTKDEEVLTSTGASISEVKENNTTKLEDSMQATEIDMPIENDVVEDIEPTTKVDEALQTANPEDSQAQVMQTDSLDDSEPPPQLLLPHEEKPERPEIIGKQEQPERLDVQEKHEKEVKEERSIKKLETPPIFAYQQPIKRPLKKTTKKLVIKLKSKESVTTHPAPQPQPRTPTPTPMQIPSTSAETTTSEPQKEKVVAEAPETTQKEEINSIKTEHLQVVVSSVFRISPPLFADADEKLPPDEDMQPSTSNVMAIEKEVALPTYPSEGKPTADLAAFLDQCMKKEEVEEHPMHSIFGMEIPSTAETLDNVLTPQAPPGFPSASLFSKPLTSYEQLTMSESVLPDSNDVQEQDQHQSQPQQPQQQNNSTFVEYPFSFIYGAEANQQEPNNKHTISPPMYCSEDFNKYNASTSGGNSASCTWYQSQSSENEFEIDGKGSYLDLDSCKRSASFAAATEGSMPTADTLNIRTDEKMPAKGEISEQESNCGVENSWSQPLYNDFPVRFPNHYQNFMTTHESWSHDHYFRPQDLSSSVETKNFGLRLTEESPIMDALPSTSKRKNKAAAKVPRKKTFQCAHCNTHFPLLKEKNAHLIKQHGYKRVNRRLIRDPPTSTVTTATINSIDAGASLLLGLESSALHHPLLVEEKDSKPAIVKIEQKTHERKDCKKNIAKLALTTTVTPTSAGISRTKYDSMRARDNRMLINFNLNALNVKNEGEVHSYYMESKSSFCCFVCRREFLTVKLFDEHLAEHPAECFTCHKKFTKWKNFMVHLKRHLGWKDFGCTFCEKKFVIRSALVEHMRMHTGQTPLKCKICGKSFKRYSNLTQHRKRHSTKINRTKDYVCYCGEVLPSKARFIWHKETHDLKPKCCPYCRDRFVHANSLRRHIRLAHSDKFDYTEPMECPMCKQIYAKSSIKAHMATHSMDTQHECLICNKSFSTKWNLKIHNWVHANRTTKPYKCDQCVKAFVREVDYNNHMNSHKQIKPYTCEHCGCKFIRKYNYIRHRREHHGNKKFTCDLCGKLFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTSEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -