Basic Information

Insect: Brachyopa scutellaris
Gene Symbol: -
Assembly: GCA_949775065.1
Location: OX459112.1:6525588-6528829[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00016 0.038 16.0 1.1 2 23 401 422 400 422 0.97

2 16 1.4e-05 0.0034 19.3 1.1 1 23 428 450 428 450 0.98

3 16 6.6e-05 0.015 17.2 0.3 1 23 456 479 456 479 0.98

4 16 5.8e-05 0.014 17.4 2.5 1 23 494 516 494 516 0.98

5 16 0.012 2.8 10.1 2.9 1 23 549 571 549 571 0.97

6 16 7.6e-05 0.018 17.0 1.8 1 23 577 599 577 599 0.98

7 16 8.2e-06 0.0019 20.1 1.0 2 23 712 733 711 733 0.97

8 16 4.9e-06 0.0011 20.8 2.8 1 23 739 761 739 761 0.98

9 16 3.4e-05 0.0081 18.1 0.7 1 23 767 790 767 790 0.98

10 16 0.00018 0.043 15.8 1.2 1 23 801 823 801 823 0.98

11 16 0.0001 0.023 16.7 1.5 1 23 835 857 835 857 0.98

12 16 0.017 4 9.6 2.0 1 23 863 885 863 885 0.97

13 16 6.9e-05 0.016 17.2 1.1 2 23 891 913 890 913 0.95

14 16 0.029 6.9 8.9 0.7 1 23 921 944 921 944 0.96

15 16 0.0028 0.66 12.1 0.6 2 23 953 975 953 975 0.92

16 16 0.0013 0.31 13.1 1.2 2 23 981 1002 980 1002 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00016	0.038	16.0	1.1	2	23	401	422	400	422	0.97
2	16	1.4e-05	0.0034	19.3	1.1	1	23	428	450	428	450	0.98
3	16	6.6e-05	0.015	17.2	0.3	1	23	456	479	456	479	0.98
4	16	5.8e-05	0.014	17.4	2.5	1	23	494	516	494	516	0.98
5	16	0.012	2.8	10.1	2.9	1	23	549	571	549	571	0.97
6	16	7.6e-05	0.018	17.0	1.8	1	23	577	599	577	599	0.98
7	16	8.2e-06	0.0019	20.1	1.0	2	23	712	733	711	733	0.97
8	16	4.9e-06	0.0011	20.8	2.8	1	23	739	761	739	761	0.98
9	16	3.4e-05	0.0081	18.1	0.7	1	23	767	790	767	790	0.98
10	16	0.00018	0.043	15.8	1.2	1	23	801	823	801	823	0.98
11	16	0.0001	0.023	16.7	1.5	1	23	835	857	835	857	0.98
12	16	0.017	4	9.6	2.0	1	23	863	885	863	885	0.97
13	16	6.9e-05	0.016	17.2	1.1	2	23	891	913	890	913	0.95
14	16	0.029	6.9	8.9	0.7	1	23	921	944	921	944	0.96
15	16	0.0028	0.66	12.1	0.6	2	23	953	975	953	975	0.92
16	16	0.0013	0.31	13.1	1.2	2	23	981	1002	980	1002	0.97

Sequence Information

Coding Sequence: ATGTCAGTCAAGCTAGACGACACTGTTTGCCGAGTATGTTTAAGTTCCTCGGGCAACATAACACTGTTTGATGAGTGCGGGAAAGATGACCAATTTCGTTATTGTACTTCTTTGGAGgCATCAAAAGACGATGGACTTCCGTCAAAGCTTTGCAAAAAGTGTAATGACCATCTCAAGGTTGCCTATGATTTTCGATTCCAGGCGATTTATGCAGAAAAATATTTTCGGAAAACTATATTTCTGCCATCGTTAAAAGATGATGGAGGGTCTGCGCTGGTCTCTGATGGACGCATTTCCACAGATGAACTGGACGAGAACATGGCAGAGATTGATATGTTGATTGCGATACACACGGAAGCCGTAGATGAGGGTGATGATGACAATGACAATGACAATCTGAACAATTCGGGATTCTTCGATGATGACAGTATGGATGTCAATGAGAAACAGGTGGAGGTAATTGGAATGGACATGTTTGAAAAAGAACAGCGGGAACAGAAAGAGCAGAAGATCAAAATAGAAATTGGCAATGTTCCACCTCCGCTCGTTTCAACAACGTCCAGTAATACGGGGTATGTCACATCTGTTCCTTTAGTAAACATGCCTCTAGAGTCACCGCAATCAACAACGAGCCACACTAATGCGTTACAGCATTCCCACGTGGATATGAGTGAAATTCAGCAGTTTACAACTTCGAGTCCTTATTCCGCGCAGTCTGTGCAGGATCTACGAATGGTGCATGACAATGGTAGATCCCTGCAATTGGAAATTCTCCCAGCTATGAAGAATGATCCTTCCACATCTTCGTTTGAATATAATTCATCTGCAACGGGTGACGGCGGATTTGAATCTTATAGCGCAACAACCCACATGCAATACCAACAGCAAATGCCCTTGCATCTGCAATACGAGCCACCTTCAACTACCGAACATTCAACGTTGCCGGAATCCGCTCCAAACACAAGTAGTTATGATTTCTCATATCAACAGCAGTTCCAATTATACCGTACACCGACGCCCGAAATAAGATCTGAGCAGCAGGCAATGCCTCCAATTCCACAAGAACAATCAGATAAAACGGCAGAAGCTCATGGGATTCTAAACGAATCCGATACCATTAAAAAGACTGAAAATAAAGGAATTTCAAACTTTAAACCGAATAAGGTTAAACATGACGCACCTCGTCGTAGGGATAAGATCGAGTGCAATATCTGCGGAAGCATTTTTACGCATTTGAACTCGTTGAAGACTCATCTTCTCAAGCATTCCGGTGAGAAACCCTTCAAATGTGACTTTTGCGACAAGGCCTTCGCAAGAAAAACCGTTCTCAACATTCATCGAAGGTTGCATACCGGCGAAAAGCCCTATAAGTGTTCGCTTTGTCCAAATGCCTATGTTACAAAGGAAGCTCTAACGcgCCATCTACAAAAGGATCACGAACAAGAAGTGGGAGCTAACTTTCGTAAGGACAAGGTGTCCTATATTTGCTCCATATGTAACAAGCCTCGCTGTTCGAAGTACTCGTTAGCGTCTCACATGAAAACTCACTCCAGTGATGCAAAGGCCCGCCGTACGGTTTTTCGTCGGAAAAAGGGTAAGTGCGATGGAGTCAATGGTTCAGTGACAAATAATATTCCGCTGAAGTACTCATGCAAGATTTGTCATAATGGTTTTCACAACAAATGGGAACTTAGTACACACGCTGAGTCGCATGATATAAATAAGACCTTTGAATGTGATGTCTGTCAGCGAACGTTCGAAAAGAAGTTCCAGTTACTGTACCATTTGCAGACCCACGATGGGGGTGAGGAGTTAGTGAAAGCTAAGATGCAACCAAGTGGTGATAAACTAATACAAAAAGAAACCGCAGAGACTAGCAAGAAGATAGAGGAAAAGCAACAGTCAACGGACAAGAAAACCAGAATAAAACTTCCGTCTAGGAAACGCCGAAAAAGGAAGGTTAAGGTTGTACGTGATGAAAGTGATGAGAATGATAATGTAGACGAAAATGGTGACATTGATGGTGATATTGCCGAAGAATACGAGCAATTAACAACGAAAAAGGTCCCAGCCAAGAGAACTAATCGTACACAGCGTGAGAACCTGAGAACACTGCGGGCTGGTAGTAAAATTGAGTGTCATATATGCGAGGCAGTGTTTACGCATCCCACGTCACTGAAGACCCACATGCTGGTACATTCAGGCGAACGGCCATATAAATGTGATCACTGTGATAAGTCATTTGCCAGAAGAACCGTTCTCAATATCCATCGAAGACTGCACACCGGCGAGAAGCCCTATAAGTGTCCGCTTTGTGATAGTGCCTGCGTCACCAAGGACGCTCTTATGCGACACATGTCAAAAGACCACGATGACGACAGGGAAGCTGATCGCATCAAATTTACCTGTGGAATCTGTCACAAGGCGATGGGTACAAAGTACTCTCTCCAAGCGCACATGAAGCTACACGAACAGTACTCGACGGCGGATACAGAAGTGAAGTACTCCTGTAACACTTGCACAGAGTCGTTTAATTCCAAACTGGACTACACGAATCACATAAAGGTGCATGATTCTAATCGAAATTTCCAATGCGACATCTGCCAGGTAACATTTGAGAAGAAGTTTAAGCTACTCTTCCACCTACAGACGCATAAAATTGAGGACTTGCCTTGTAAAAAGTGCGGCGAGACATTCTGCATAAGAGAAAACCTCATCCAACACATCAAGCTGCAGCACATGGATCCTCGAAACATGGATTTTCAGTGTCCGCATTGCAACATTGGACAGTATGACACCCGTGATTTAAAATTACACATGCTGAGTGTACACGATGTGTCTATGGGTGGCATTAATTCCTGTGATCTGTGTGGGGAGAGCTATTACACTGCAGCGGAGTACTACAAACATATGCACGATAAACATGACACAATTAGTAAAACATGCAACGAGTGCGAAAAGTACTTCGATTCGAGGAAAGCATTTGATAAGCACATACTGTCGCACTATATGTAG
Protein Sequence: MSVKLDDTVCRVCLSSSGNITLFDECGKDDQFRYCTSLEASKDDGLPSKLCKKCNDHLKVAYDFRFQAIYAEKYFRKTIFLPSLKDDGGSALVSDGRISTDELDENMAEIDMLIAIHTEAVDEGDDDNDNDNLNNSGFFDDDSMDVNEKQVEVIGMDMFEKEQREQKEQKIKIEIGNVPPPLVSTTSSNTGYVTSVPLVNMPLESPQSTTSHTNALQHSHVDMSEIQQFTTSSPYSAQSVQDLRMVHDNGRSLQLEILPAMKNDPSTSSFEYNSSATGDGGFESYSATTHMQYQQQMPLHLQYEPPSTTEHSTLPESAPNTSSYDFSYQQQFQLYRTPTPEIRSEQQAMPPIPQEQSDKTAEAHGILNESDTIKKTENKGISNFKPNKVKHDAPRRRDKIECNICGSIFTHLNSLKTHLLKHSGEKPFKCDFCDKAFARKTVLNIHRRLHTGEKPYKCSLCPNAYVTKEALTRHLQKDHEQEVGANFRKDKVSYICSICNKPRCSKYSLASHMKTHSSDAKARRTVFRRKKGKCDGVNGSVTNNIPLKYSCKICHNGFHNKWELSTHAESHDINKTFECDVCQRTFEKKFQLLYHLQTHDGGEELVKAKMQPSGDKLIQKETAETSKKIEEKQQSTDKKTRIKLPSRKRRKRKVKVVRDESDENDNVDENGDIDGDIAEEYEQLTTKKVPAKRTNRTQRENLRTLRAGSKIECHICEAVFTHPTSLKTHMLVHSGERPYKCDHCDKSFARRTVLNIHRRLHTGEKPYKCPLCDSACVTKDALMRHMSKDHDDDREADRIKFTCGICHKAMGTKYSLQAHMKLHEQYSTADTEVKYSCNTCTESFNSKLDYTNHIKVHDSNRNFQCDICQVTFEKKFKLLFHLQTHKIEDLPCKKCGETFCIRENLIQHIKLQHMDPRNMDFQCPHCNIGQYDTRDLKLHMLSVHDVSMGGINSCDLCGESYYTAAEYYKHMHDKHDTISKTCNECEKYFDSRKAFDKHILSHYM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -