Bscu046115.1
Basic Information
- Insect
- Brachyopa scutellaris
- Gene Symbol
- -
- Assembly
- GCA_949775065.1
- Location
- OX459115.1:72264014-72266323[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.7e-11 3.3e-08 34.7 0.1 3 41 14 52 12 54 0.93
Sequence Information
- Coding Sequence
- ATGAAAACAACAAGTAGGTCAAATAAAGTTCCAGAGAAAGAGAAAATGGCACTGGCTCTTCGGGACATACGAAATAACACATTGAGCATAAGAAAAGCCGCAGCAACGTACGCAATTCCTAGGACAACAATTCAAGATCGCCTTCATGGCAGAATTTCTGAAGACGTTTCGAGGTTTGGACCAGAATCATACCTTTCAGCagatgaagaaaagaaatttACAGAGTGGATAATTAATCTAAATGGGCATAAGTCTCATCTTACAATGGAGTTAAGCCAATTTTGCAGTGAGAAAAACATCATACTCTATGCTTTGCCACCTAATACCACTCATATTATGCAACCTGCTGATGTTAGCCTCTTCAAGCCATTAAAATCTAATTGGAAACAAACAGTGCATTCCTGGCAAAAAGAGAATTCTGGTGTTATTCTGACCAAGAAAAATGTTTGTCTTCTGTTGCAAAAAGCGCTTCTCGCcagtaaaaatataaatgagaCAATTAAAAACGGATTCCGTAAGTGTGGCATATACCCATTAGATCCGAATGCTGTGGATTATACCAAGTGTGTTAAGACGACTGCCATCAACGTTACACAAAGCATTCAGTCTGAAATGTGTTTCTCTGATAGGTATAAAATTGCTGCTGAAGTTATTTTGGAGTTTCGTGAGTGCGGACTGAATCCTGATGACATAGTTAAAGTTATAACTGAAGCATCGACCATACCAAATGTGTCATCTTGCTCTCCAAAAAACATATGTGATAAAGAATTGTCCCGCGTCCTGGAGGAAGCATCCAATATTTTAGGAGAGCCAGCTCAATTGCCGGGAGATCTAGTAGGCTTTCGAGAAGAAATATTGACACAAGATTTGGCCCGAAACTCGGAAAGTTCATCTAATGTACCAGAAGTTCAACATCATTTGCCAGCAGCGCCAATAGGCGATCCGAAGGAAATCATCACTGCTCAAAAGGAGTTAACCCATTCCTTAGAAGAACATATACAAGGAAAACCAGACTGCATTCCAGATGACGGACCTGACAATGAAGAGGACAAAAATGCCACATCAACAATCTCGCTTTTGAACGTCACACTAGGTGATATTGAAATACCATCAGGCATCTTTGATATAGACGACGACGAAGGAGTTTTACACGAAGCTGAAACGTCAACAAATCGAAAACACGatttagaaataaacaaaataccgTCCTGTTCAACTTCAGATGTCACTGTAACTTCATCACCAGGCGCACGGTCAGAAGTATCACATGCAATAGTGACACACCTATTTTATCCTAAACCAATTGGCTTTGAAGGCAAGAGGAAATCCAAAGAATCTACAAAATCTCCAAGTGCTATTTCCTCACAAGGTTGGAGAGACATTTTTTTGAACAAAGAGCGGAAAAAACAACTGGAACAGGAAGCTCTATTACAGCGGAAGGAAGAACGTCTCGCCAAGAAGCTTCTTAAACAGAAGCAACCTAGAAGGAAGCAGAAAAGAGGAATTAAACCCAAACCAAGTTCAACAACAGCCTCGGAAGTTAGACAAATCTGCaaaaattgttttgaagaaCTTATAAGTGATGTAGAGGATgataatctgaaaaatataggTTGTGATTCTTGTCCTTCGTGGTTCCACCTCAAATGTACTTCGTTGAAAGAATTCAGTTATGCAGAAGCATAA
- Protein Sequence
- MKTTSRSNKVPEKEKMALALRDIRNNTLSIRKAAATYAIPRTTIQDRLHGRISEDVSRFGPESYLSADEEKKFTEWIINLNGHKSHLTMELSQFCSEKNIILYALPPNTTHIMQPADVSLFKPLKSNWKQTVHSWQKENSGVILTKKNVCLLLQKALLASKNINETIKNGFRKCGIYPLDPNAVDYTKCVKTTAINVTQSIQSEMCFSDRYKIAAEVILEFRECGLNPDDIVKVITEASTIPNVSSCSPKNICDKELSRVLEEASNILGEPAQLPGDLVGFREEILTQDLARNSESSSNVPEVQHHLPAAPIGDPKEIITAQKELTHSLEEHIQGKPDCIPDDGPDNEEDKNATSTISLLNVTLGDIEIPSGIFDIDDDEGVLHEAETSTNRKHDLEINKIPSCSTSDVTVTSSPGARSEVSHAIVTHLFYPKPIGFEGKRKSKESTKSPSAISSQGWRDIFLNKERKKQLEQEALLQRKEERLAKKLLKQKQPRRKQKRGIKPKPSSTTASEVRQICKNCFEELISDVEDDNLKNIGCDSCPSWFHLKCTSLKEFSYAEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00240602;
- 90% Identity
- iTF_00240602;
- 80% Identity
- iTF_00240602;