Bscu028662.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachyopa scutellaris
Gene Symbol
bab2
Assembly
GCA_949775065.1
Location
OX459113.1:130229921-130253331[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-16 2.6e-13 51.0 0.0 2 43 1036 1078 1035 1080 0.95

Sequence Information

Coding Sequence
ATGCCTAACATTTGCGGTAATACATCATGTAAACTAGCGACGAGTGACTTTAATGCTGACTGGGTAGTCTGCAATGGGCTGTGCGGTAATTCTTTTCATGCCCTGTGTATCGGTTTAAGCAAGCGATCTGTGCCCTATATTAGTGACTTTAGCAAGAATTTCGTATTCTACTGTGATGAGTGCAGAGAATTATCACTCTCACATATAATGATCGCGATAAAGTGCTGTAGTGACTCTATAAAAACCGTCTCCTCCGAAAATAAActactaaacaataaaatactgaaCGAGTTTAATAAGTTTGATGACCTGTTAAAAAGTGTTGATGATTTATCTAACAGCATCGAACTCTCGGTTAACCTCTGCCGGTCCAAGTTTAAAAGTATTGACAAGCAGTTGGTAGGCCTTAATGACTCATTTACCAAGTCTCCAGCTGACTTAAACTCAAAGCTTGTGAAACTAAAATGTGATAtccttttaaactttaaaacccTTTTCGCCTCCGAGCTTTCTACTATCAATGGCTCCCTCAACTCTCTTCGCTCCGATTTTGACATACACTGTCAAAGCTCATCAAAGACTGTTGCTGCCTCTACCCTACCCAGCGATCCATTACTTCTTCACATGATGAGCAGAATTAATGATGTGAGCAACAATGTCGAGGCTTCCCGGGTAACCATAGGCGATATAGCTGAGGACATCAGACTGACTATCAACAAAATTGATGACATCCCAGATCTCTTTCAGCCGCAACAGAGTTCTCTCAACAATAGATCATTACTAACGGAAATGCTTGAATCCGATCCTCCAGCGACAAAATCTCCTCCTCTTCAACCATCAATTCTATTGCCACCAAGACTCCCCCAAGAAACCGCAGCTGCCCCAGAAGTTGTACCGACTGTCGAGCGTTTTGGAACGATATGGACCCTTTCTGACTGGAATAAGAGGCTTAGTAAACTCGGTGGTGGTAACATAGCggaaacaaaaactaatgcgtTCACTTCGCTCATCATTTCTGGTGCCCCCCATCATGCTGATACCACCTGGATAGTGAATCTTTTCCACAAAAAGTATTCCATTACCGTAAACGACTGTCAGAAGACTTCGCCACTCAGCTCCAAGAAGTCCCCGTGCTTCAAAATAACCATTCCCTCCAAATATGAATGGCTTTTCCTCAACCCAGCTAGTGACGATTTTCATCTGGataatttagttataaaaaaagtagaaccCAAGAAAAAACGTAAGACTAAAAAACCTAGTCCTAGTTcttataaaaatctaaaatcttatAATAACCCTAGCCCTAAGCCTAATGTAAGTATCACAACCCATAAAAATAAACCTAGCTCTAATAGTACCAACTCAAACTGGAGTTTTAAGCAGGGAACATTTCCTATCTTCTCCCCGCAAATTCGCCAACCACCAACCTCCGTTCCCTCAACTCCAATATTGGCAAAGCCGCCATCCGTAAATAACACCCGCCAAAACCGTGTGTCTTTTAACTTACAGCCTGACCCATCTCATTCAACTAGCCGCACCGCATCAACCATCTCTACTCCCTCTGCTTCTCAATATCCGAACTTTTTTCGCTCCCACATTATTAATCCCTCCCCATCCTCTATGTCTGTCAAGTCATCTAATTCTACCACAGTCAACACCCCATCTAGTTTTTTAGACCCTTTGCTTTCTCCTACAGTCAAACTCACCAAGCAGCTTGTAGATGGTAATGACGACAGCCGCTATGTACTGTCGCGTTTGAGAGATCATAGAATTTACGAGAACGTCCGTCTATATCTTGCCTACCTTCATGACAAACCGGACTCCATTTGCATTAATGGAGTAACTAAGACTAACGTCATGGTCTCAATTCACCAAGAGGGCCTTCCAACAAACCTCGACGACCTAAAGCGCATATTTGTCCGTTTCCATGAGAGCTTCAGTATTTCTCCTACTGATGTAGCAAATGATCTTTCCTCATATGCCTCACATGTTAACTCCAAACtTCCTAACCTTCCCTCTTCTGTTTTGTCTCACCCCGCTCCCGACTGCTTATCTCTTTATTACCAGAATGTTAGGGGCTTACGTACAAAGACCTCCACAGTATACCTTAACTCCCAAACTCTCCCGTATGACATCTTTGCACTGTCTGAAACAAATCTATCTTCCGACTATAATAGTAACGAGCTATTCACGTCAGAATTTAATGTCTTTAGAAATGATGGTCTTGAGAAAGAAGACGACTCCACTGGTCGTGGTGTTCTCCTTGCAATACATAATCGTTTTGACTCTACGCTCTATAAAGCTTCACATACCGGTATCTTTGAGTTCATTTGCGTCAAAATAACTGTCTCAAAGCGTAACCTTTACCTTTTTTGCTGCTACATTCGCCCTTCTCAACCCATCCATGGTTACCAGCTTGCTGTAGACGCAATCGACGACCTGTTTGATGTTGTAGACCCCTGCGATGTTATCGTATTCCTTGGTGATTTCAACCTACCCGACCTCAAATGGATTCAGTCTGATGACGAGTCCCATTTTGTGGCCCTGAATCTATCTACAGACAAGGAAATCCTTTTCACTGGCTGTCTTTCCGACTCTGGCCTACACCAATTAAGTGGCATCACTAACAACTTAGgaatgtatgaatgtatggCGAAATGCACCACCCCCAGTAGTACGGGCACGGAGGCCACCGACACCGACACCGACACCGACACGGACACGGAGTGTTTTATACGTCTTTGTCGTTTTTTTCTGCTTTTCTTGAAAAGAAAGAAAGCGCTACTGGTATCTAGTAGTAGTACTAAGTATGCAGCTAGCTATAAGAAGAAATCCGAACCGAAACAAAGTCGTGGCCAGAGTGAGGAGGACGAGATGGATGACGGGCCGGGCCGGGATGACGATATGGGACGAGCGCAATTTGCAAACGCTAAGCTCATCGAAGGAGCGCATCCATGGATGGCTGGAGCATCGTCGGCATCTGTTGCTGATAGCTACCAATATCAACTGCAGTCAATGTGGCAGAAATGCTGGAATACCAATCAGCAAAGCTTGGTTCAACAGCTGAGGTTTCGTGAACGCGGACCTCTTAAGTCATGGCGACCAGAATCAATGGCCGAGGCAATATTTAGCGTTCTAAAAGAAGGACTATCGCTGTCACAGGCCGCTCGTAAATACGATATCCCTTACCCAACCTTTGTTCTGTATGCCAATCGTGTGCACAACATGCTGGGGCCATCACTAGATGGCGGTTCCGATCCTCGACCCAAGGCCAGAGGTCGTCCCCAGAGGATTCTCTTGGGAATGTGGCCAGAAGAGTTGATTCGATCCGTCATTAAAGCAGTGGTGTTCCGCGACTATCGTGAAATTAAAGAGGAAACCGTGCAAATGTACGCGAATGGTGGTGGAGGTGGCGCAGCCGCTGTATCTCATTCGTCCCAGTATGGAATGCCAGGTGCTCCATCTAATGGCTCCTCATCCAACGGTTACCACAATAAAATGGGActtcccagtggcaacttacaACCGGACTCAACGAGCCCCCTGTCAACTATGGCGGAAACCCTCCGTCGCCAGATCCAAATGTCACAACAATCTCCGTCGCCATCGTTGAATATGTACAAGTCACCCGCTTTCTTACAACGCTCTGAAATGGAAGACCCAATGTCAAAGAGAAGTTCCGCGGACCTTCACTTATCCGCTGGAAAAATGGCGGACAATATGCCTGACCTAACCGCACTTGGTCTCATGGGAATCCCCGGTCTGAATGTCATCCCGCAGGGGCGTAGTCAGCATCCGATCACGCATCAGCAACAGCAGCCACAGCATCTCCAGCCGAATACATCATTCTCAAGTCGAGATTTAAAAGAGGGAATGCAGCAGCACATGGCCAATGCAATGTCACAGGCGGCCGCCGCTGCAGCATCAAGACCCCAACTTCCATACGGACAACAGCGAGGCAACAGCCAGAGCGGCAGTAGTAGTTCCCACCAGAAGCCCAGCAGCAGTTCCCCCTTCTCTATAAACTACAAAACCAAACCCGATCCCGCATCCTACAAATTCACCGACAAACGGATGCTCGAGGGCCTAACGCCCGGCATAGACTTCGAGGCGATCGCCAACGGTTTGCTCCAGAAATCGCACAAGGCATCGCCCCGCTTCGAAGACTTTTTCCCCAGCCCCGACGTCAGTGATCTCTTTGCTACGAATCCGGGCGCGGAGGCGACAGCCGGCTACCCCATGAAGGATCACCCGATAGCGAAGATCAAACTGGAGCACCAGCACCATAGCACCGACACCCACGAGGAATAA
Protein Sequence
MPNICGNTSCKLATSDFNADWVVCNGLCGNSFHALCIGLSKRSVPYISDFSKNFVFYCDECRELSLSHIMIAIKCCSDSIKTVSSENKLLNNKILNEFNKFDDLLKSVDDLSNSIELSVNLCRSKFKSIDKQLVGLNDSFTKSPADLNSKLVKLKCDILLNFKTLFASELSTINGSLNSLRSDFDIHCQSSSKTVAASTLPSDPLLLHMMSRINDVSNNVEASRVTIGDIAEDIRLTINKIDDIPDLFQPQQSSLNNRSLLTEMLESDPPATKSPPLQPSILLPPRLPQETAAAPEVVPTVERFGTIWTLSDWNKRLSKLGGGNIAETKTNAFTSLIISGAPHHADTTWIVNLFHKKYSITVNDCQKTSPLSSKKSPCFKITIPSKYEWLFLNPASDDFHLDNLVIKKVEPKKKRKTKKPSPSSYKNLKSYNNPSPKPNVSITTHKNKPSSNSTNSNWSFKQGTFPIFSPQIRQPPTSVPSTPILAKPPSVNNTRQNRVSFNLQPDPSHSTSRTASTISTPSASQYPNFFRSHIINPSPSSMSVKSSNSTTVNTPSSFLDPLLSPTVKLTKQLVDGNDDSRYVLSRLRDHRIYENVRLYLAYLHDKPDSICINGVTKTNVMVSIHQEGLPTNLDDLKRIFVRFHESFSISPTDVANDLSSYASHVNSKLPNLPSSVLSHPAPDCLSLYYQNVRGLRTKTSTVYLNSQTLPYDIFALSETNLSSDYNSNELFTSEFNVFRNDGLEKEDDSTGRGVLLAIHNRFDSTLYKASHTGIFEFICVKITVSKRNLYLFCCYIRPSQPIHGYQLAVDAIDDLFDVVDPCDVIVFLGDFNLPDLKWIQSDDESHFVALNLSTDKEILFTGCLSDSGLHQLSGITNNLGMYECMAKCTTPSSTGTEATDTDTDTDTDTECFIRLCRFFLLFLKRKKALLVSSSSTKYAASYKKKSEPKQSRGQSEEDEMDDGPGRDDDMGRAQFANAKLIEGAHPWMAGASSASVADSYQYQLQSMWQKCWNTNQQSLVQQLRFRERGPLKSWRPESMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSLDGGSDPRPKARGRPQRILLGMWPEELIRSVIKAVVFRDYREIKEETVQMYANGGGGGAAAVSHSSQYGMPGAPSNGSSSNGYHNKMGLPSGNLQPDSTSPLSTMAETLRRQIQMSQQSPSPSLNMYKSPAFLQRSEMEDPMSKRSSADLHLSAGKMADNMPDLTALGLMGIPGLNVIPQGRSQHPITHQQQQPQHLQPNTSFSSRDLKEGMQQHMANAMSQAAAAAASRPQLPYGQQRGNSQSGSSSSHQKPSSSSPFSINYKTKPDPASYKFTDKRMLEGLTPGIDFEAIANGLLQKSHKASPRFEDFFPSPDVSDLFATNPGAEATAGYPMKDHPIAKIKLEHQHHSTDTHEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-