Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949775065.1
Location
OX459115.1:104071711-104076971[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.9e-25 1.8e-21 77.9 0.1 2 88 193 275 192 276 0.94

Sequence Information

Coding Sequence
atgtcGACTAAAATTAAcaaagcagcagcagcagaaacTTCGTCAGCGTCATCAGGAGTAGCAGTAGGGGGCTCTCAATTGTCCTCTGGTGGCAACGGTGGTAGTGTAATAACAAATGGAACACCACAGAGACGTCTACGGACAAGAACATCGCAATCTGCAAGTGGAAGTGAAAAGAAGAATAATGAGCGAATGTGTACTACGTCAACATCGAGCGATTCTAGCTCGTCGCTACCTGGCAACGGATCGAGCGATGATGCTaagaaaaaaacagtatttGCACGCGGTAAGTCCTTGCATACACAACCGCATTCGTCTTCAACGTTTTCGCAAAATAAAAACGAAGAGTTCCACTTTGATACGCCACGTGAATGCCCGGTATTCCGACCGACCACAGATGAGTTTAAGAATCCACTCGCCTACATTAGCAAGATTCGGCCAATCGCCGAGAAATGTGGCATTGCAAAAATCCTGCCACCACCTGAATGGCGTCCGCCATTCGCTGTGGATGTTGACAAATTGAAGTTCACCCCGCGTGTGCAGAGATTGAACGAGTTGGAGGCGAAGACACGGGTTAAGTTGAATTTTCTTGATCAAATCGCCAAATTCTGGGAGCTTCAAGGTTCGTCACTGAAAATTCCAATGGTCGAGAGGAAGGCATTGGATCTGTACACTCTGCACCGTGTTGTACAGGAGGAGGGCGGCATGGAAATGACAACCAAGGAGAGAAAGTGGGCAAAGGTTGCCAATCGAATGTCGTACCCATCGAGTAAGAGTGTTGGAGCTACACTAAAAGCGCACTACGAGAGGATTCTACACCCCTTCAATGTGTACACATCGGGCAAGATAATCGACATGAAGCTGGAGGCAGAATCAGTGGGTTCAGATGATGCCAAGGACTACAAATCCCATGAAATAGTGTCACGGCAACAGATTACTCCACCGAACGAAACAACTGCTCGACGATCAAAGCGTTTCGCGAATTCAGGTAAAGGCGCCGTGTGTGGCTTGGGAGCTACACCTTCATCCACGTCGACCATGCACTGCGAAACGAAGGAGGACTTCAAACGCAATCTGATTGCCACTTTCAATAATATAGCGAGTAATGCAGGCAAAGCTTCTAACGTGGTAGATCCTCTAATGAAATATATTTGTCATATCTGCAACCGGGGGGATGTAGAAGAATCAATGCTTCTCTGTGATGGATGTGATGATAGCTATCATACGTTCTGTTTGATTCCACCGTTGGCATCTATACCGAAAGGTGAATGGTTGTGTCCTCGCTGCGTCGTGGAAGAAGTAAGCAAGCCCACCGAGGCATTTGGTTTCGAGCAAGCCGAACGCGAATATACCCTCCAGCAGTTCGGAGAGATGGCCGACCAGTTTAAGGCGGATTACTTCCGTAAGCCGGTGCACATGGTGCCAACAGATCTAGTGGAACGAGAGTTCTGGCGAATTGTATCCTCGATTGACGAAGATGTGACCGTTGAGTATGGAGCCGACCTGCATACTATGGATCACGGCTCGGGATTTCCCACAAAAAGTTCGCTCTATCTTCTGCCCAGTGATCAGGAATACGCCGAATCACCATGGAATTTGAATAATCTTCCATTGCTGGAAGATTCAATCTTGGGCCATATCAATGCCGATATAAGTGGAATGAACGCACCGTGGATGTATGTGGGAATGTGCTTTGCTGCATTCTGCTGGCACAACGAAGACCACTGGAGCTACTCGATCAATTATCTCCATTGGGGAGAGCCAAAAACATGGTACGGCGTGCCCGGTTCATGTGCAGAGGCCTTCGAAGAGACCATGAAGAAGGCAGCACCAGAGCTGTTTGCTTCTCAACCCGATTTGCTCCATCAGTTGGTGACAATAATGAACCCGAATATCTTGATGAATAACGGAGTACCAGTGTTCCGGACAGATCAGAATGCTGGTGAATTTGTCATCACTTTCCCACGCGCCTATCATGCTGGCTTTAACCAGGGATACAATTTTGCCGAGGCGGTCAACTTTGCCCCAGCCGACTGGCTAAAAATGGGACGCGAGTGCGTCAACCATTATTCAATTCTACGACGTTTCTGTGTATTCTCGCATGACGAGTTAGTCTGCAAGATGGCACTGGAACCGAACAAGCTCACATTTGGCATTGCCACCGCTTGCTACATCGATATGGCCGAAATGGTGGACTCTGAGAAAAAATTGCGAAAGAGTCTGCTCGAGTGGGGTGTAACCAGAGCAGAACGCAAGGCATTCGAACTGATTCCAGATGACGAGCGCCACTGCCAAGAATGCAATACCACCTGCTTTTTGTCAGCGGTCTCATGTGAGTGCACCAACTCGATTGTTTGCCTCAGACACTACACCGTGCTGTGTGTTTGTCCTCCTGAGAAACACACTCTGCAGTATCGCTATACTTTAGACGAGATGCCGCTAATGTTGCAAAAGTTGAAAGCAAAGGCTCAGAGCTTTGAAAGATGGCTATCGAGATGCCGCGACATCATAGACACAAATACACCCACAGTGGTTACGCTTGCAGAGTTGCAAGAACTGACGAAAGAAGCCGAACTAAAGAAGTTCCCAAGTTCGTTGTTGATTGATCGATTAAACGCAGCCGTATTGGAAGCCGAAAAGTGTGTGACTGTTATACAGCAGCTGGGAATCAATAAGGTCCGTACCCGTCTGGATCATTCAACTGACGCCGCTCAATACAAGCTTACTATGGAAGAGCTCGAATTATTCGCACAAGAAATCGACAACCTGTGTTGTATCATTGAAGAAGGTCGCAGTGTTCGTGAGCTTCTCGCAATCGGAAAAGACTTTGTAGAACGTGCAAAATGTATGCTGGCAAAGGGCACAGATGTATCGGATGAGAAGGCCATAGAAAACCTAATAGATGAGGGTTGCTCGCTTCGAATTGAGATGCAGGAAATGATTGGGCTGTCAAGTCGCTTGAAAGCAATCAAATGGTGTAAGCGCTCGCAAATGCTGCGTAACTCAACCGTAAAGATGACACACGCCGAGGTGAAACACTTCATAAGCACCGGCCAAGCCATCGATATCGATCAATCTGTAGAGAAGGAGCTGAGGATATTACAGCAAACCCAATTGCAGATAGAAACCTGGGAGAAAACGGCGAACAAGTACTTCCGTGGCAGTGCTCAACATGAATTGCCCGAGattgaaatgtttttaaaaaccgGTGATGAAATAAACGGACAACTGCAATCGTATGGAGCGCTAAAGGACgcaattaaaaaagctaaagagTGGTTAAAGTCGGTAGAGGCCCTGCAGGCGAATGATCACTTTCCATACTGCCACACGCTGGAGGAGATCGTACAGCGTGGCAAGAACATTCCCATACAGCTGGAAGAGCTTTTCCGTATGCAGGGGCATTTGAATAGCGCCAAAGAGTGGAAAGAGAACACTGCAAAGGCATTTCTCAAAAAGAATACGTACTACACACTATTGGAGGTGCTTATGCCGCGCTCAGAGTCGATTGGCATCGATTCTGACACCAAGAGACCGTTTGAGGCTGATTTTCTAAAAGATATGAACCCAGCACAGATTGTGGATTCCTTTAAAACGGCTGAAGAAAAGGAGATAAAGAATATGCGAGAGCTGAGGCGCATTAATATGGGGAAAAATCAGCTTAAAGATAACTATTGTCTCTGCAACAGCAAGTTTCAAAGTGTCATGTTCAATTGTCAACTATGCAAGGACTGGTTCCACGAGGATTGTGTTAAGGATGGATTTGCAAAGTCTAGATCTGCCTCGAACACCCCAACATTAGTTGGTAGTCCATTGCCGGCAATGAATGGAATGCACGTTAAACCGAAATTCCTTTGCCCCTCATGTGTGCGATCTAAGAGGCCCCGTTTAGAGACGATTCTTCCATTGCTGGTATCACTACAAAAATTGCCCATTCGATTGCCAGAAGATGAGGCATTAAGATGCCTTGCAGAGCGGGCAATGAACTGGCAAGATCGTGCACAGAAAGCATTAGCCAACCCCGAAATAGCTTCAACATTGGAAGCACTAACAAGATCCAGAATAAAGGTAGAGAAACCCAATCGCCGAACCCTCCAACAGCAGAGGAAAACTGCTACCCACCCCGAAAAACAGTCCAGTATCTCCGATGGCGAGGATCCCGATAATGATGAGGATGaagatgatgacgatgacgacgaggGAAGGTTGCGCATTGATGAAGACGCTTTCAGCGATGAAGACTCGTCCCACCAGCAGGAAGACGAAACAAGCAAGAATTTCCCCAACAAACTGACTGACAATGAATACGAAACCCTAGAGGAGCTAATGATGGAGGGTGATCTACTCGAAGTCTCACTGGATGTGTCGCAGGAACTGTGGCGGGTAATAAAAGCAACAAATCCCCAAGCCTCGGACCTAAACCACTATCCACAGCCCTTTAATCTCCCCTCGGATGAGTCCAACGACAGTCTAGTCCATCAACACACGAATAACAACTCGAGCAGCAGTAGTGGCAGCAACAATGCATTGAAAAAACGTCGTTCCTTGGACCCGGCGGTGTTGTGTCCCGTACCGCGCAAGAAGACAGCCACCCCCAATAAGCTGCAGCAGGCtaacaataaaaaacaagtcgGTGGACGGCGTTCTGAGCCCACAAAGCAAGCCACCATTAACTCGACAGAGGACAACACAGAAAACAACACACCCCCACAGGCAAAGGGTGGCAACACTAAAAAACGAAAGCGTGCCACCAGCAAGAAGCTCTCACAGCGCGCTCAAATGGCTCAACAGGAAGACGACGAAGAAGAGTGTCGCGCCGAAAACTGTCACAAGCCAACTGGCCGTGAAGTCGATTGGGTACAATGTGACGGTGGCTGTAACGAATGGTTTCACATGTTCTGTGTCGGACTCAATCGCagccaaattaaagccgacGACGATTACATCTGCATACGGTGCGCTAAAGCCAATCCGTCGCAGACCACTAAAAACCGATCGCAGCCAAGGTAG
Protein Sequence
MSTKINKAAAAETSSASSGVAVGGSQLSSGGNGGSVITNGTPQRRLRTRTSQSASGSEKKNNERMCTTSTSSDSSSSLPGNGSSDDAKKKTVFARGKSLHTQPHSSSTFSQNKNEEFHFDTPRECPVFRPTTDEFKNPLAYISKIRPIAEKCGIAKILPPPEWRPPFAVDVDKLKFTPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRVVQEEGGMEMTTKERKWAKVANRMSYPSSKSVGATLKAHYERILHPFNVYTSGKIIDMKLEAESVGSDDAKDYKSHEIVSRQQITPPNETTARRSKRFANSGKGAVCGLGATPSSTSTMHCETKEDFKRNLIATFNNIASNAGKASNVVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLIPPLASIPKGEWLCPRCVVEEVSKPTEAFGFEQAEREYTLQQFGEMADQFKADYFRKPVHMVPTDLVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPSDQEYAESPWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEAFEETMKKAAPELFASQPDLLHQLVTIMNPNILMNNGVPVFRTDQNAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSILRRFCVFSHDELVCKMALEPNKLTFGIATACYIDMAEMVDSEKKLRKSLLEWGVTRAERKAFELIPDDERHCQECNTTCFLSAVSCECTNSIVCLRHYTVLCVCPPEKHTLQYRYTLDEMPLMLQKLKAKAQSFERWLSRCRDIIDTNTPTVVTLAELQELTKEAELKKFPSSLLIDRLNAAVLEAEKCVTVIQQLGINKVRTRLDHSTDAAQYKLTMEELELFAQEIDNLCCIIEEGRSVRELLAIGKDFVERAKCMLAKGTDVSDEKAIENLIDEGCSLRIEMQEMIGLSSRLKAIKWCKRSQMLRNSTVKMTHAEVKHFISTGQAIDIDQSVEKELRILQQTQLQIETWEKTANKYFRGSAQHELPEIEMFLKTGDEINGQLQSYGALKDAIKKAKEWLKSVEALQANDHFPYCHTLEEIVQRGKNIPIQLEELFRMQGHLNSAKEWKENTAKAFLKKNTYYTLLEVLMPRSESIGIDSDTKRPFEADFLKDMNPAQIVDSFKTAEEKEIKNMRELRRINMGKNQLKDNYCLCNSKFQSVMFNCQLCKDWFHEDCVKDGFAKSRSASNTPTLVGSPLPAMNGMHVKPKFLCPSCVRSKRPRLETILPLLVSLQKLPIRLPEDEALRCLAERAMNWQDRAQKALANPEIASTLEALTRSRIKVEKPNRRTLQQQRKTATHPEKQSSISDGEDPDNDEDEDDDDDDEGRLRIDEDAFSDEDSSHQQEDETSKNFPNKLTDNEYETLEELMMEGDLLEVSLDVSQELWRVIKATNPQASDLNHYPQPFNLPSDESNDSLVHQHTNNNSSSSSGSNNALKKRRSLDPAVLCPVPRKKTATPNKLQQANNKKQVGGRRSEPTKQATINSTEDNTENNTPPQAKGGNTKKRKRATSKKLSQRAQMAQQEDDEEECRAENCHKPTGREVDWVQCDGGCNEWFHMFCVGLNRSQIKADDDYICIRCAKANPSQTTKNRSQPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00665417;
90% Identity
iTF_00314928;
80% Identity
-