Basic Information

Insect: Brachynemurus nebulosus
Gene Symbol: Zbtb41
Assembly: GCA_035578155.1
Location: JAPWDM010000018.1:5899600-5901219[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2.4e-05 0.0013 20.4 1.2 1 23 79 101 79 101 0.97

2 14 3.9e-06 0.00021 22.9 1.0 1 23 106 129 106 129 0.98

3 14 0.00077 0.042 15.7 0.7 1 23 169 191 169 191 0.98

4 14 4.5e-05 0.0025 19.6 3.2 1 23 196 218 196 218 0.99

5 14 0.022 1.2 11.1 2.0 2 23 238 259 237 259 0.95

6 14 0.00037 0.02 16.7 5.3 1 23 265 287 265 288 0.96

7 14 1.7e-06 9.5e-05 24.0 1.6 2 23 297 318 296 318 0.97

8 14 0.00016 0.0085 17.9 0.5 1 23 324 347 324 347 0.96

9 14 0.003 0.16 13.8 3.8 1 23 353 375 353 375 0.98

10 14 0.0059 0.32 12.9 6.2 1 23 381 403 381 403 0.94

11 14 1.2e-06 6.3e-05 24.6 3.6 1 23 409 431 409 431 0.99

12 14 0.00022 0.012 17.4 1.8 1 23 437 460 437 460 0.98

13 14 0.5 27 6.9 0.3 5 23 475 493 472 493 0.92

14 14 0.076 4.2 9.4 3.6 1 21 499 519 499 520 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2.4e-05	0.0013	20.4	1.2	1	23	79	101	79	101	0.97
2	14	3.9e-06	0.00021	22.9	1.0	1	23	106	129	106	129	0.98
3	14	0.00077	0.042	15.7	0.7	1	23	169	191	169	191	0.98
4	14	4.5e-05	0.0025	19.6	3.2	1	23	196	218	196	218	0.99
5	14	0.022	1.2	11.1	2.0	2	23	238	259	237	259	0.95
6	14	0.00037	0.02	16.7	5.3	1	23	265	287	265	288	0.96
7	14	1.7e-06	9.5e-05	24.0	1.6	2	23	297	318	296	318	0.97
8	14	0.00016	0.0085	17.9	0.5	1	23	324	347	324	347	0.96
9	14	0.003	0.16	13.8	3.8	1	23	353	375	353	375	0.98
10	14	0.0059	0.32	12.9	6.2	1	23	381	403	381	403	0.94
11	14	1.2e-06	6.3e-05	24.6	3.6	1	23	409	431	409	431	0.99
12	14	0.00022	0.012	17.4	1.8	1	23	437	460	437	460	0.98
13	14	0.5	27	6.9	0.3	5	23	475	493	472	493	0.92
14	14	0.076	4.2	9.4	3.6	1	21	499	519	499	520	0.95

Sequence Information

Coding Sequence: ATgcaatctgaaaaaaatataattagttTAATCAACAGTAATGTATGGAATGAAGTTGAATCTAAAAAAGAGGTAaatacattattaaataaaataaaattaaaacgtgaACTTGGAGACATTATTAAAACTGAACCTAAAGAAATAACTTTAGATTTAACAAGTTTACATTCAGAAATTAAAATCGAATCCGATAGTGATGAGAACTGCGTTAAAATAACACCCACAATGACATTTGTGTGTAAACTATGTTCAAAAACATTCGGTACACTTCGTAATTTGCGGCGACATGAAAATATTCACACTGGTGTAAAATTCAAATGCGAGGAATGTCCGAAAGAATTTTCCCGAATGGATAGCTGGAAAAAGCATATAAATACGAAACATAGTAAAAAACGTTCTGTTACTGTTTTGTCGTCGGCTTCCCTGAAACAACATAAAAATGAGAAGTCGAACAAAACTGAAGAAACACATTGGTCAGGTGAACAAATGGATGGAAAACGATTTGTGTGTAACATATGTTCGCAAACATACAGTGCTCTTAACAGTTTGAGGCGACATAAGAATATTCACAACGGTGTAACATTCAAATGTAAAGAATGTCCGCAAACATTTTATCGAACTGACAAACTGAAGCAACATGAAAAAACCCACGTGTGCAAAGAACAAGTAAATATTTCTGAAGATTTACCTAGCGAGAAGGAATTAATTACATGCGATATTTGTTCTGAAAACTTTTCTCACatcaactttttgaaaaaacacaaaataaacCATACCAATGAAAAACCGTTCAGTTGTCAAGAATGTTCCAAGACATTTATTTAtcggtattatttaaaaatgcacGAACGAAAACATCACGAGTTGAAgccgataaaaaaattacaatgcaAAGTTTGTCAGAAAATATTCACTCAACGCAAAAATCTTAAGGATCATTTAAGAATTCATTCTGGCGAAAAGCCTTATAAGTGTGATCAGTGTTCAGAAGCGTTTACGTACAAATCCGGTTTAATTACACATAAAGCTAAGATACATATTGGTAAAAAGGAATATAAGTGTACtacatgtttaaaaaaattttttacatccaaagatttatataaacataaaattgtgCATGAAAGTGTTAGACCTTACTTATGTACTTTTTGTGCGAAAAGTTTTAAAACACGTACACATCTAAAGAATCATGAACATGTTCACACAGCCGGAAAATTCTATGAATGTAACACATGTTCGAAAAAATTTACGCAGAAGTATTCATTAAAATCGCATATGAAGATACACGACACTGAAGAGCCATTTAAGTGTGCTGTATGTTCAGAAACATATTCTTCATATTCCGGCTTACggaaacataaacaaacaaaacacaGTGAATATGGTGAATATAAACCAACTAAACGGTATAAATGTTGGTGTTCTAAAGCATTTTCCGCTTTAGAGTTATTAAACAGGCACAAAGTTGTACacaccggtgaaaaaccatttcaGTGTGATGTTTGTTTAATGAGATTTACGCAGAAGTGTAGCGTGACACGGcataagaaaaaaacaaaatgcgGCCTGGGTGATGTTAATGTTGAAGACATTCTTGAAGTTGCAATTTTATAG
Protein Sequence: MQSEKNIISLINSNVWNEVESKKEVNTLLNKIKLKRELGDIIKTEPKEITLDLTSLHSEIKIESDSDENCVKITPTMTFVCKLCSKTFGTLRNLRRHENIHTGVKFKCEECPKEFSRMDSWKKHINTKHSKKRSVTVLSSASLKQHKNEKSNKTEETHWSGEQMDGKRFVCNICSQTYSALNSLRRHKNIHNGVTFKCKECPQTFYRTDKLKQHEKTHVCKEQVNISEDLPSEKELITCDICSENFSHINFLKKHKINHTNEKPFSCQECSKTFIYRYYLKMHERKHHELKPIKKLQCKVCQKIFTQRKNLKDHLRIHSGEKPYKCDQCSEAFTYKSGLITHKAKIHIGKKEYKCTTCLKKFFTSKDLYKHKIVHESVRPYLCTFCAKSFKTRTHLKNHEHVHTAGKFYECNTCSKKFTQKYSLKSHMKIHDTEEPFKCAVCSETYSSYSGLRKHKQTKHSEYGEYKPTKRYKCWCSKAFSALELLNRHKVVHTGEKPFQCDVCLMRFTQKCSVTRHKKKTKCGLGDVNVEDILEVAIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -