Basic Information

Insect: Brachynemurus nebulosus
Gene Symbol: Gzf1
Assembly: GCA_035578155.1
Location: JAPWDM010000002.1:46403061-46419701[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.0076 0.41 12.6 4.2 1 23 168 190 168 190 0.98

2 21 0.0021 0.12 14.3 2.4 2 23 199 220 198 220 0.96

3 21 0.00053 0.029 16.2 0.9 1 23 232 254 232 254 0.97

4 21 2.4e-05 0.0013 20.4 2.6 1 23 262 284 262 284 0.98

5 21 0.07 3.8 9.5 0.3 3 23 295 315 293 315 0.95

6 21 3.1e-06 0.00017 23.2 2.7 1 23 352 375 352 375 0.97

7 21 7.6e-05 0.0042 18.8 0.0 1 23 385 408 385 408 0.95

8 21 0.83 45 6.2 5.6 1 23 414 437 414 437 0.91

9 21 0.72 39 6.3 0.4 1 13 445 457 445 462 0.80

10 21 0.0015 0.082 14.8 2.3 1 23 615 637 615 637 0.98

11 21 0.0014 0.078 14.8 3.5 2 23 646 667 645 667 0.96

12 21 0.59 32 6.6 1.6 3 23 678 696 677 696 0.94

13 21 0.00071 0.038 15.8 1.5 1 23 702 725 702 725 0.98

14 21 2.3e-05 0.0012 20.5 0.3 3 23 736 756 735 756 0.96

15 21 1.2 66 5.6 4.0 1 23 762 785 762 785 0.97

16 21 0.17 9 8.4 0.5 3 19 814 827 813 832 0.70

17 21 0.00038 0.021 16.6 1.3 1 23 838 861 838 861 0.97

18 21 0.0026 0.14 14.0 1.0 3 23 873 893 872 893 0.96

19 21 1.2e-05 0.00064 21.4 3.7 1 23 899 921 899 922 0.96

20 21 3.2e-05 0.0017 20.0 1.9 1 23 930 952 930 952 0.98

21 21 5.2e-05 0.0028 19.4 3.8 1 23 958 980 958 980 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.0076	0.41	12.6	4.2	1	23	168	190	168	190	0.98
2	21	0.0021	0.12	14.3	2.4	2	23	199	220	198	220	0.96
3	21	0.00053	0.029	16.2	0.9	1	23	232	254	232	254	0.97
4	21	2.4e-05	0.0013	20.4	2.6	1	23	262	284	262	284	0.98
5	21	0.07	3.8	9.5	0.3	3	23	295	315	293	315	0.95
6	21	3.1e-06	0.00017	23.2	2.7	1	23	352	375	352	375	0.97
7	21	7.6e-05	0.0042	18.8	0.0	1	23	385	408	385	408	0.95
8	21	0.83	45	6.2	5.6	1	23	414	437	414	437	0.91
9	21	0.72	39	6.3	0.4	1	13	445	457	445	462	0.80
10	21	0.0015	0.082	14.8	2.3	1	23	615	637	615	637	0.98
11	21	0.0014	0.078	14.8	3.5	2	23	646	667	645	667	0.96
12	21	0.59	32	6.6	1.6	3	23	678	696	677	696	0.94
13	21	0.00071	0.038	15.8	1.5	1	23	702	725	702	725	0.98
14	21	2.3e-05	0.0012	20.5	0.3	3	23	736	756	735	756	0.96
15	21	1.2	66	5.6	4.0	1	23	762	785	762	785	0.97
16	21	0.17	9	8.4	0.5	3	19	814	827	813	832	0.70
17	21	0.00038	0.021	16.6	1.3	1	23	838	861	838	861	0.97
18	21	0.0026	0.14	14.0	1.0	3	23	873	893	872	893	0.96
19	21	1.2e-05	0.00064	21.4	3.7	1	23	899	921	899	922	0.96
20	21	3.2e-05	0.0017	20.0	1.9	1	23	930	952	930	952	0.98
21	21	5.2e-05	0.0028	19.4	3.8	1	23	958	980	958	980	0.98

Sequence Information

Coding Sequence: ATGGAGGAAAAATTATTGTCTGAGAACGCCTcggaattttttgataaattaaatataagttttggatttgAGTTGGCTCAAGATGACATACTACCTAAAGCGTTTTGTACAGAATGCgccaaaaaaattgatattatatatgattttaaaaagCTGTGTATATATTCAGAACAATTACTCAAAAGTGTATTAACAGGTGATACGTTTAAAGTTAAAGAAGAACCAGATTCAAAAATAGAATGTGGCGATTTATTAGAACCTAGTAACTACGATACCGCTTTTGATCTTAATGACGATATTAAAGTAGACACGGATTTATTTAGAGCCAACGTAGACTTAAATGTATCTCAGAGTGATGAGGATTCAACGGATAATACAAAAATGTACACAGTAAAGGAAGAGGATAATGATTTAAATGAAACAGTAACCAAGAAATCGATATCgataaaaatgacacgtttatTTAATCAACATGCAGAAGTACTCGAAGGTGACAGCGGTTATCGGTGTAATATATGCCATAAACAATCCCAAAAGCGTGTTAATATGAGAAAACATATGATGTTACACATTCCAAAAGAACAGCGGGCCCAATATTGTACaatttGTAATAAACGTTATACACGAAAGCTATCGTATCTAAAACATTTGAAAGAACACGAAaaagATGATGTGCTTGAAGAAATGAACATATACCAATGTCCTGAATGCCAGCGATTATTTGACAATCAAGACGAGTTAGATAAACACAAGTATAGAcatatttcaaaagaaaatcgAATTTATGAATGTGCAAAATGTCATAAAGTATTTAAAAGAGCGTATAGTTTGACTCAACATAAACTTGTTCACGTCGCAAAGGAGACTCGCAAGAAATTAGCTTGTGCAtattGTGGCAATTTGTACATTAGTAAAAAGAGTTACCAGAAACATCTTCAGTTACATGAAAATCAAAAAGGACCTGTTACGATTCCAAAAACATCGTGTGAATTGTGCGGGAAAATTGTTTCCTCTATCGACAGTCATATGCGAAATATTCATCGCGAAAAACAACATAAATGCCCagattgtaataaatatttcacctTTCGAAGTTCTCTACAAAAACATATTAATGTCGTTCACAAAAAACAAGAAGTTAAAAAATGTCGGTACTTATGCCCTCAGTGTGGTAAAATATTTGCCAGTAATGCTGATTTACAAGGTCACATATCAATGGCGCATGAAggtcaaaaaatgtataaatgtgAATTTTGTAATCGAGAATTCACATTTAAATCGCGACTTCGATTTCACGTACATTCACGTCATTATAATACTAtaacgaaaaattttagttgccAAGTATGCGGTAAAAAGTTTCTTACTAGAACTAAActCGAAGAAGACGATGatttaccaaatttattctGTAAAAGTTGTACAGATAATATAAATATGATGTGCGATTTTAAACGGGTCTGTTTATATTCACAACAATTACTCGCCGATGCcattaaaaacgaatttttaaagcaaaaagaCAATATCGAAAAAAGCGTAAGTGCAAACAATGTAAATAGCGTCAAGACTGAAGAAATATCTAAAGTAAGTGAAgcaaatattgttaaaatttccgATGGTGTGAAAGATGATACTGTTAACGAAAATCGCTTAAGTGAAATCGAGGAATTTGATCGTCTTAGTGATCACACAGTTAATGATAGTGAAAATGAGGATAATACGAGATCTTTACAAGGTAAATCGAAAATATCGTGTAAGGACGAAATAGTTGATTTCGTGTCATCAATGTTAACGAATCTAATGACATCGAAAACAATGAAACTTGATAAAATTGCTGGCTATAAGTGTCTCGAGTGTGGAAGAATTTGTCGAAAACGTCTTGGATTAAAGAAACATATGTTACTACACATTCCAAAAGAACACCgtcaaaaatattgtacaatctGTGATAAAACTTACAGCCGTGACGATACCTTCATAAAACATTTGAAACATCATCAACACGATGATTtccaagtaaaaaaattatgtacattcTGTGGCAAATCATTTTTACAGTTGAAACAACATATGTTACGTGTACATAGCGAAAATAAATCGTACCATTGCTCGAAATGTGACCGAAAATTTGCAATTAAAATTGCGTTGCGAGATCATATCAGAAAAGTTCACGACggtaaaaagaatattaaattacTATTGTGTCCGGAATGTGGTAAAACTTTTAAAAGTCGGCGGGATCTGGAATCACACGTAGCAAATCACACCGgtcaaaaaccgtataaatgtaTTGACTGTAAACTTGAGTTTAAATGGTCGTCTAGTTTACATTATCATATGAAAAAGAAACATAGTGTAAGTAAATTACTGGGAAATAAAATGGGCTTACAGCCTGAAGAACCGCAGAAAAATGACACGCCACCGATTAAAGAACCATGTCAACTTTGTGGCAAATCATTTACAAATCTACGCTACCATACGCTTCGAATACATAGCGAAAACAAACCGTACAGTTGCCAGAAATGTGATAaaaaatacccccttaaatCATACCTGAAAGAACACGTCAATCGGGTGCATGATGGTATTGTAAAACCGAAGAATACATCACTGTGTCCTCAATGTGGAAAAACATTCTCATGTCCACGTGACCTTCAGTCACATATTGCATTTCACGCAGGCGTAAAGTTATATAAATGTACGCTTTGTGATCGGGAGTTTACGTTTAAACAGAATCTAAACGAACATATGAAGATACATCATAATGCGAGTCGAGTGAAAAATTTCGCTTGTACGTACTGCGATAAAAAATTTACGAGCAATACAATTTTACGAAATCACATACGAACACATACCGGTGAGCGACCATTTTCCTGTAAAATATGTCAGAAGAGTTTCACGCAAGATTGTGCTTTGAAAACGCACATGAAAATACATAATCCGGAAGGAAAGATGAATCCAGTTTAA
Protein Sequence: MEEKLLSENASEFFDKLNISFGFELAQDDILPKAFCTECAKKIDIIYDFKKLCIYSEQLLKSVLTGDTFKVKEEPDSKIECGDLLEPSNYDTAFDLNDDIKVDTDLFRANVDLNVSQSDEDSTDNTKMYTVKEEDNDLNETVTKKSISIKMTRLFNQHAEVLEGDSGYRCNICHKQSQKRVNMRKHMMLHIPKEQRAQYCTICNKRYTRKLSYLKHLKEHEKDDVLEEMNIYQCPECQRLFDNQDELDKHKYRHISKENRIYECAKCHKVFKRAYSLTQHKLVHVAKETRKKLACAYCGNLYISKKSYQKHLQLHENQKGPVTIPKTSCELCGKIVSSIDSHMRNIHREKQHKCPDCNKYFTFRSSLQKHINVVHKKQEVKKCRYLCPQCGKIFASNADLQGHISMAHEGQKMYKCEFCNREFTFKSRLRFHVHSRHYNTITKNFSCQVCGKKFLTRTKLEEDDDLPNLFCKSCTDNINMMCDFKRVCLYSQQLLADAIKNEFLKQKDNIEKSVSANNVNSVKTEEISKVSEANIVKISDGVKDDTVNENRLSEIEEFDRLSDHTVNDSENEDNTRSLQGKSKISCKDEIVDFVSSMLTNLMTSKTMKLDKIAGYKCLECGRICRKRLGLKKHMLLHIPKEHRQKYCTICDKTYSRDDTFIKHLKHHQHDDFQVKKLCTFCGKSFLQLKQHMLRVHSENKSYHCSKCDRKFAIKIALRDHIRKVHDGKKNIKLLLCPECGKTFKSRRDLESHVANHTGQKPYKCIDCKLEFKWSSSLHYHMKKKHSVSKLLGNKMGLQPEEPQKNDTPPIKEPCQLCGKSFTNLRYHTLRIHSENKPYSCQKCDKKYPLKSYLKEHVNRVHDGIVKPKNTSLCPQCGKTFSCPRDLQSHIAFHAGVKLYKCTLCDREFTFKQNLNEHMKIHHNASRVKNFACTYCDKKFTSNTILRNHIRTHTGERPFSCKICQKSFTQDCALKTHMKIHNPEGKMNPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -