Bneb034954.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachynemurus nebulosus
Gene Symbol
ZNF131
Assembly
GCA_035578155.1
Location
JAPWDM010000018.1:5938522-5940909[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 6.1e-06 0.00033 22.3 1.5 1 23 57 79 57 79 0.97
2 20 2.4e-05 0.0013 20.4 2.5 1 23 84 107 84 107 0.97
3 20 1.7e-05 0.0009 20.9 0.8 1 23 135 157 135 157 0.98
4 20 0.0011 0.059 15.2 5.8 1 23 162 185 162 185 0.96
5 20 1.8e-05 0.001 20.8 0.7 1 23 223 245 223 245 0.99
6 20 2.6e-05 0.0014 20.3 1.3 1 23 335 357 335 357 0.98
7 20 0.0012 0.068 15.0 3.9 1 23 362 385 362 385 0.96
8 20 7.8 4.2e+02 3.1 0.2 4 17 409 422 408 423 0.85
9 20 6e-05 0.0032 19.2 1.1 1 23 425 447 425 447 0.98
10 20 0.0045 0.24 13.3 3.9 1 23 452 474 452 474 0.97
11 20 0.0052 0.29 13.1 1.4 2 23 493 514 492 514 0.97
12 20 0.00024 0.013 17.3 1.3 1 23 520 542 520 542 0.98
13 20 4.5e-06 0.00025 22.7 0.4 2 23 555 576 555 576 0.98
14 20 0.0003 0.016 17.0 0.9 1 23 582 605 582 605 0.96
15 20 0.0071 0.39 12.7 6.3 1 23 611 633 611 633 0.98
16 20 0.0085 0.46 12.4 2.3 1 23 639 661 639 661 0.95
17 20 1.1e-06 6e-05 24.6 3.7 1 23 667 689 667 689 0.99
18 20 0.0012 0.068 15.0 0.9 1 23 697 719 697 719 0.99
19 20 0.055 3 9.9 0.4 5 23 731 749 729 749 0.94
20 20 0.029 1.6 10.7 4.9 1 21 755 775 755 776 0.95

Sequence Information

Coding Sequence
ATGAGCCTTCTAAAGAGTTATCTACAAAATGAACGGAATAATGAATCTGAAGACATTATTAAAACTGAATGTCAAAATCCTTTTTTAGATTTAGCAAGTTTACATTCTGAAATTAAAATCGAGTCCGATGACGACCAAAATTACGCGGAATCAACACCTAAAATGGAGTTTGTTTGTAAAACATGTTCAAAAGTATATTCTACATCGAGCAGTTTGAAGCGACATGAAAATATTCACACTAGCGTCAAATTCAAATGTAATATCTGTTTGAAAAAATTCTCTCGAGACGATAATTTAAGAAGACACAAAAATAGAGTTCACAATGGACGTAGTAGTTCCTCTTCAGATTCATCGGAACCATTTTCAGGTGACGAATCGAATGAAACTGAAAAAATCAATCCGTTtgtatgtaaaatatgttttaaatcgTACAGTGCTCCCTATAGTTTACAACGACATCAAAATGTTCACAAAGGTATAAAattcaactgtaaaaaatgttcGCAAACATTTTGTCGATCTGATGGTTTGAAGAGGcatgaaaataaatttcatagtACAAATACTATTACCTCTTCAGACTCTTTGGAAGCTGAAAAAACTAATAATTCGACCAGTAAGTTCTATAATTTACGACGACGTAACAGTGTTCAGACagatataaaattcaaatgtaaAATATGCTCCAAAGAATACGATCGAGCCGAGAGTTTGGAGAACCACGAACGAACCCACAAAGAAAACGATGATTCCAAAGATTTacctaatgaaaataaattaattgcgTATGAAAATGCCGAAACTGAAGAAACGGATCGCTCAGAAAGTGTAAACATCAATGAACCTAAACGAAAAAGACACAAAAATAAGTACCACAGTACGAATACAAAATCCTCGTCTAATACCCCGAAACGGTATACGAATGAAGAGTTAAACGAAACTAAAAAAACAGATCGCTCGAAGAGTTCAGACGTCAACGAGCCTTATActaatggaaaatggtttgtgtgtaaaatatgttccaaaGGGTACAGTAGCTCTCGTAGTTTGCAACGACATGAAAAAATGCACACGAATGCCGAATTTAAGTGTAAGATATGTTCGAGTGAATTTTGTCGAGCCGAAAACCTAAAAAAACACGAACTTAAGTACCACAGTACAAATACAGAAGAATCCGCATCGAATCCACCGGAGGAATCACACACGAATGAGACTGAAAAAACAAATCATTGCTCGAAAAGTTTCGATACTAATGAACTTTATAACAAACGATTCGTGTGTAAAATATGCTTGAAAGCGTACAGttcactttttaatttgcgACGACATGAGAATACTCACAAGGGTATAAAATTCAAATGTCGAAAATGTCCGCAAACATTTTCTCGCACTGATCAACGAAAGAAACATGAGAAACTTCATATATACAAAGAACATATTCGTGAAAATTCATCCAGCAgcaaaaatcaattaattacaTGCAATATTTGTTCGGAAAATTTTTCGCACatcaattttttggaaaaacaccTCATAAAACACACCAGTGAAAAACCGTTCAAATGTGAAGAATGTTCTGAAACGTTTACTTATcgattgaatttaaaaatacacgAACTAAAACATAAAGATTTAAAAGTAGATGGAAAATTGGGTGATAGACAATGTAAAATATGTCGTAAAGTGTTCACGCAACCGGACAGTCTTCTGGATCATTTAAGAATTcataccggtgaaaaaccatttaagtgTGATCAGTGTTCAGAAACGTTTACGTACAGATCCGGTTTAATTACACATAAAGCTAGGATACATATTGGTAAACGGGAATATAAGTGTACCACatgttcaaaacaattttttacatcCAAAGATTTACATAAACataaaagtgtacatgaaagtGTTCGACCATACTTATGTGCTTTTTGTGGTAAACGATTTAAATTAGTTAAACATCTAAAAATTCATGAACAAAGTCACACCGGTGAGAAATTGTATGAGTGTAACGaatgttcaaaaacattttcacataaatattCGTTAACGTTACATATGAAGATTCACGACACGAAAGATCCCAAACCGTATAAGTGTGATTTATGTTCGAAAATGTATGCTTCAATTGTCGGATTGCGGACACATAAACGAAAGCACGACGGATATAAACCGGCTAAATTGTATACATGTTGGTGTTCGAAAGCATTTTACACTTTAGATTTATTAAACAGGCACAGAGTTGTACACAGCGGTGACAAACCATTTAAGTGTGATGTTTGTAAAATGAGATTCACTCAGAAGTGTAGCGTGACGCGGcataagaaaaaaacaaaatgcgGCCTGGGTGATGTTAATCTTGCAGATATTCTTGAAGTtgaaattttatag
Protein Sequence
MSLLKSYLQNERNNESEDIIKTECQNPFLDLASLHSEIKIESDDDQNYAESTPKMEFVCKTCSKVYSTSSSLKRHENIHTSVKFKCNICLKKFSRDDNLRRHKNRVHNGRSSSSSDSSEPFSGDESNETEKINPFVCKICFKSYSAPYSLQRHQNVHKGIKFNCKKCSQTFCRSDGLKRHENKFHSTNTITSSDSLEAEKTNNSTSKFYNLRRRNSVQTDIKFKCKICSKEYDRAESLENHERTHKENDDSKDLPNENKLIAYENAETEETDRSESVNINEPKRKRHKNKYHSTNTKSSSNTPKRYTNEELNETKKTDRSKSSDVNEPYTNGKWFVCKICSKGYSSSRSLQRHEKMHTNAEFKCKICSSEFCRAENLKKHELKYHSTNTEESASNPPEESHTNETEKTNHCSKSFDTNELYNKRFVCKICLKAYSSLFNLRRHENTHKGIKFKCRKCPQTFSRTDQRKKHEKLHIYKEHIRENSSSSKNQLITCNICSENFSHINFLEKHLIKHTSEKPFKCEECSETFTYRLNLKIHELKHKDLKVDGKLGDRQCKICRKVFTQPDSLLDHLRIHTGEKPFKCDQCSETFTYRSGLITHKARIHIGKREYKCTTCSKQFFTSKDLHKHKSVHESVRPYLCAFCGKRFKLVKHLKIHEQSHTGEKLYECNECSKTFSHKYSLTLHMKIHDTKDPKPYKCDLCSKMYASIVGLRTHKRKHDGYKPAKLYTCWCSKAFYTLDLLNRHRVVHSGDKPFKCDVCKMRFTQKCSVTRHKKKTKCGLGDVNLADILEVEIL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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