Basic Information

Insect: Brachynemurus nebulosus
Gene Symbol: ZNF236
Assembly: GCA_035578155.1
Location: JAPWDM010000022.1:5695391-5723327[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.024 1.3 11.0 2.7 1 23 134 156 134 156 0.96

2 19 0.0053 0.29 13.1 0.2 1 20 162 181 162 183 0.95

3 19 7.5e-05 0.0041 18.9 0.3 2 23 192 213 191 213 0.96

4 19 0.047 2.5 10.1 0.1 3 23 221 241 220 241 0.98

5 19 0.14 7.7 8.6 2.8 2 23 249 270 248 270 0.95

6 19 0.15 8.3 8.5 5.1 1 23 299 321 299 321 0.96

7 19 7.5e-06 0.00041 22.0 2.8 1 23 327 349 327 349 0.99

8 19 0.00034 0.018 16.8 0.2 1 23 355 378 355 378 0.97

9 19 0.00013 0.0073 18.1 1.0 1 23 389 412 389 412 0.97

10 19 2.4e-07 1.3e-05 26.7 2.4 1 23 537 559 537 559 0.98

11 19 1.5e-05 0.00083 21.1 0.7 1 23 565 587 565 587 0.99

12 19 0.047 2.5 10.1 2.3 3 23 623 643 621 643 0.98

13 19 0.014 0.75 11.7 2.4 1 23 691 713 691 713 0.99

14 19 0.00013 0.0072 18.1 1.1 1 23 719 741 719 741 0.98

15 19 0.00086 0.047 15.5 3.2 1 23 747 769 747 769 0.95

16 19 0.0012 0.065 15.1 3.5 3 23 777 797 776 797 0.99

17 19 8e-08 4.4e-06 28.2 0.9 2 23 1027 1048 1027 1048 0.97

18 19 6e-06 0.00033 22.3 1.1 1 23 1054 1076 1054 1076 0.98

19 19 1.9e-06 0.0001 23.9 0.3 1 23 1083 1105 1083 1105 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.024	1.3	11.0	2.7	1	23	134	156	134	156	0.96
2	19	0.0053	0.29	13.1	0.2	1	20	162	181	162	183	0.95
3	19	7.5e-05	0.0041	18.9	0.3	2	23	192	213	191	213	0.96
4	19	0.047	2.5	10.1	0.1	3	23	221	241	220	241	0.98
5	19	0.14	7.7	8.6	2.8	2	23	249	270	248	270	0.95
6	19	0.15	8.3	8.5	5.1	1	23	299	321	299	321	0.96
7	19	7.5e-06	0.00041	22.0	2.8	1	23	327	349	327	349	0.99
8	19	0.00034	0.018	16.8	0.2	1	23	355	378	355	378	0.97
9	19	0.00013	0.0073	18.1	1.0	1	23	389	412	389	412	0.97
10	19	2.4e-07	1.3e-05	26.7	2.4	1	23	537	559	537	559	0.98
11	19	1.5e-05	0.00083	21.1	0.7	1	23	565	587	565	587	0.99
12	19	0.047	2.5	10.1	2.3	3	23	623	643	621	643	0.98
13	19	0.014	0.75	11.7	2.4	1	23	691	713	691	713	0.99
14	19	0.00013	0.0072	18.1	1.1	1	23	719	741	719	741	0.98
15	19	0.00086	0.047	15.5	3.2	1	23	747	769	747	769	0.95
16	19	0.0012	0.065	15.1	3.5	3	23	777	797	776	797	0.99
17	19	8e-08	4.4e-06	28.2	0.9	2	23	1027	1048	1027	1048	0.97
18	19	6e-06	0.00033	22.3	1.1	1	23	1054	1076	1054	1076	0.98
19	19	1.9e-06	0.0001	23.9	0.3	1	23	1083	1105	1083	1105	0.97

Sequence Information

Coding Sequence: AtggaatttaataatttagccaataatataataaatgtaaCACCATTACAAGAAAATCAAAAGATAAATAATCATGAAAATGTTGCACTGTTGACCATACCAATTCATCATTTAAGTTCTATTCCGATTGACCAAAATCCTCCGGAATATATTTTGAAGACACTTCCGGATGGAATTTTTGTATTAGAAGGAGCTCATcttCCACTTGCTGAGGGTAATGTAATTAAtgctttatttgaaaatgatgtACTTAAAGAGCAAGAATCACAATTACATTTCCAAACAGTTAATTTACCCTTTGTTAATAGTGATAATCagcCTAAGTCTTCACAAGATACGGAATATAATATTCAAGCGGAAGAAAATCCAAAACTGCAGCAAATCccacaaaatgaattatttacttgtaaactatgtaatgagaattttgataaaaagaaaGACTTTAAAATGCACGAATTACAACACATTAACGACAAaccgtataaatgtaataaatgcaCCGTATCTTTTAATGTCTTGGATAATTTACAACTTCATAAAGTGATATGTTCGAATGATAAAGATTCGTTAATTTGTCCggtatgtcaaaaaaaatttacacgaTTTGCAAGTTTAAAATCGCATTTAATTATACATGAATTTGATGATCATGTGTTTTGTCCAGAATGTGAAAGTCCATTTGATACACAGatgCAAGTAGCTTTACACATGAAAAGTCATATGAAGAAGAAAACTGTTTGGACTTGTAGGTTTTGTAAAAAGGAATATTCAGAACATTCAGAATATAAAACTCACATCACTGAACACACGAAGATGCGTCAAGTATTGAGCAGTCTTAGTCGTCAGTCAACTAAACGCACCACGTATTTAAAACGGAAAAAAGTTGGTCGTCATACATGTAATGTATGttcgaaatcatttttaaaactgagtCAATTAATACGGCATTGCCGAGTGCAtagcggtgaaaaaccatttaaaTGTAAGCTATGCGACAACTCTTTTAGTCAGTCAAATACGTTGAAAATTCATATGCGTAAACATACTGGAAGCCGCCCGTACAAGTGTTCATTCTGTTCTGCTGCATTTAGCCAAAtaggTAATCTTCGTGTTCACATTTTGAGAGTTCATTCGATCGATAGAAATCGtaaagaaaattcatttccTTGTACTGAATGTTCTTGTGTATTTAGTAAACTAAGTGCTTTAAATGCTCATATTAACAGAACCCATACAATGGATATCCCCAATGTTATTAACGAGTGGATCGATTTAAATAGTATGATGTGCGGGAAGCCGCAACCGTTAGAAGGACATACAGATATTTTACAACAAGCACTACATAATTCAGCGATACAAGAAAATACTCAGAACTCTTGGGTTGGTAATGACGGTAACAATGATCATAATCAGCTTCATCAAAATGCtcaaaactttcaaaataatattgggaaaaataataacataaacCTTGATAACACCAAAAAATATGATATGCAACCAGTCGAATGCGAAATTAAACAGATTACTTTAGCTGATAATACACCAGATGGCACTTTACGGCGGTACATAATTAATCAACGAAAAGTTGGTAGTGTAAGATGGCATCAGTGTTCTTATTGTccgaaagaatttaaaaaaccGTCGGATTTAATGCGACATATTCGTACACATACCAATGAAAAACCTTTTAAGTGTAATATTTGTGGAAGAGGTTTCGCCGTTAAGACCACATTATCATcacatttaaaaacacatataaaaaatatgaaacatgATGCCGATGCCGATAAAGTAGcattaaatgataatttaagCACAACAAGCCATATAAAGAAAACATTAGCTTGTAAGAAATTTGGATGCCCTActtgtggtaaaattattcaCAGCAAACATTTATTTGAAgttcatataaaaaaacatgaattaaaaaataatttaaattcaacaaTATCTCAAATACAATTACAGGATCCAATTATCATAAATGAACAAGGATTAATAGAAACCTATATTTCTTCGAAAAAACGTCGTATACTTGAAGCAGGTTCTAAAAACCGACCATATACGTGTTCAAAATGTGGATCTGGATTTTTAAAAGGCAGTCACCTGAAGAAACACTTACGAGTACATTCCGATGAAAAACCTTTCCGCTGTGATATTTGTAATAGgagaTTTCGTTTTAATGGAGTGTTAAGGAATCATTTACGGGCACATGAAGGTGTTCGACCCTATAAATGCACGGAATGTAATCATTCATTTACTATGGTTTCTAGTTTGCAGCGGCATAAAACTGCACACAGTAATAAAAGACCGCTTTTGTGCCCTTATTGccttaaaagttttaaaacatcTGCAAATTGTCGCAAACACATGAAGATTCATAAAACTGAAATTGCATTATcgatacacCAGGcgaaagaaaatgaaaataaaaaacagatTCAAGATACTGAAGTACTTTTAGATCCGAATGTTAACAGTGAGAAGCAAACTGAAATAATGAGTACTCAGGCAGTTGAGTTAGAGAATATTAATAGCAACCAACACAACGAACaagtttttcaaacactatTAGCCGAGGATACAAGAAATGTAACTCTAACCGAACTGAACTCAAATATTGTACCAATGgaTATTATGCTTGGAATCACTGATAGCTTTAATACGGATCttctaaatgtaaataaaatttcagaaattccgctagaaaataatattatacaacaGAATCCGGAGCCAACAAATATTGTTAGTCCGGTCAATCAAGATACATCCGTAAAAGTGGTATTTACTGTTACTGAAAATAATCCAGATATCTTATCCTTAAAAGAGATTGGGCCTGCTACcgataatattgtaaataatattattacttCAGAAAAGAAAATACCAGAACAAACAAATCcaaatattttggatttttttccaTTATCAGAAGAACAAAGTAAAGATCTTATTGACAATACACAACTGAAACAAATTGATATTAGTTCagatgaaaaaatcaaaaaacaacaGCCAACGCATGAAAAACTGATTGACATTGTACTGGATAccgaaaagaaaaattattgtactTATTGTGGCAAAGGTTTTCGCAAACCATCCGATTTACAACGTCATATTCGAACACATACCGGCGAACGACCGTACAATTGTGACACTTGTGGCAAAACCTTCTCATTAAATTCAACGTTAAAGAGTCACTTACAAGTTCATAGTaacattaagaaaaatttcttctGTGTAATTTGTGGGAAATCTTTTGGCACAAAAGGAAGTCTTAAAGTTCACATACGTATACATACAGGTTAG
Protein Sequence: MEFNNLANNIINVTPLQENQKINNHENVALLTIPIHHLSSIPIDQNPPEYILKTLPDGIFVLEGAHLPLAEGNVINALFENDVLKEQESQLHFQTVNLPFVNSDNQPKSSQDTEYNIQAEENPKLQQIPQNELFTCKLCNENFDKKKDFKMHELQHINDKPYKCNKCTVSFNVLDNLQLHKVICSNDKDSLICPVCQKKFTRFASLKSHLIIHEFDDHVFCPECESPFDTQMQVALHMKSHMKKKTVWTCRFCKKEYSEHSEYKTHITEHTKMRQVLSSLSRQSTKRTTYLKRKKVGRHTCNVCSKSFLKLSQLIRHCRVHSGEKPFKCKLCDNSFSQSNTLKIHMRKHTGSRPYKCSFCSAAFSQIGNLRVHILRVHSIDRNRKENSFPCTECSCVFSKLSALNAHINRTHTMDIPNVINEWIDLNSMMCGKPQPLEGHTDILQQALHNSAIQENTQNSWVGNDGNNDHNQLHQNAQNFQNNIGKNNNINLDNTKKYDMQPVECEIKQITLADNTPDGTLRRYIINQRKVGSVRWHQCSYCPKEFKKPSDLMRHIRTHTNEKPFKCNICGRGFAVKTTLSSHLKTHIKNMKHDADADKVALNDNLSTTSHIKKTLACKKFGCPTCGKIIHSKHLFEVHIKKHELKNNLNSTISQIQLQDPIIINEQGLIETYISSKKRRILEAGSKNRPYTCSKCGSGFLKGSHLKKHLRVHSDEKPFRCDICNRRFRFNGVLRNHLRAHEGVRPYKCTECNHSFTMVSSLQRHKTAHSNKRPLLCPYCLKSFKTSANCRKHMKIHKTEIALSIHQAKENENKKQIQDTEVLLDPNVNSEKQTEIMSTQAVELENINSNQHNEQVFQTLLAEDTRNVTLTELNSNIVPMDIMLGITDSFNTDLLNVNKISEIPLENNIIQQNPEPTNIVSPVNQDTSVKVVFTVTENNPDILSLKEIGPATDNIVNNIITSEKKIPEQTNPNILDFFPLSEEQSKDLIDNTQLKQIDISSDEKIKKQQPTHEKLIDIVLDTEKKNYCTYCGKGFRKPSDLQRHIRTHTGERPYNCDTCGKTFSLNSTLKSHLQVHSNIKKNFFCVICGKSFGTKGSLKVHIRIHTG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -