Bneb014260.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachynemurus nebulosus
Gene Symbol
ZFY
Assembly
GCA_035578155.1
Location
JAPWDM010000003.1:48213360-48228502[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 40 0.067 3.7 9.6 1.6 1 23 191 214 191 214 0.88
2 40 4.8 2.6e+02 3.8 4.2 2 23 220 241 219 241 0.96
3 40 0.00012 0.0067 18.2 2.4 2 23 247 268 246 268 0.97
4 40 0.00038 0.021 16.7 1.6 1 23 274 297 274 297 0.98
5 40 0.047 2.6 10.1 1.4 2 23 308 328 307 328 0.97
6 40 0.021 1.2 11.1 0.9 1 23 334 357 334 357 0.95
7 40 0.00026 0.014 17.2 0.5 3 23 368 388 366 388 0.99
8 40 0.0001 0.0056 18.4 2.1 1 23 394 417 394 417 0.97
9 40 0.036 2 10.4 2.7 1 23 423 445 423 445 0.98
10 40 4.3 2.3e+02 3.9 1.7 1 10 451 460 451 464 0.89
11 40 0.86 47 6.1 1.6 1 19 616 634 616 639 0.87
12 40 0.94 51 6.0 4.6 2 23 645 666 644 666 0.97
13 40 0.00011 0.006 18.3 2.1 2 23 672 693 671 693 0.97
14 40 0.00033 0.018 16.9 0.2 1 23 699 722 699 722 0.96
15 40 0.0053 0.29 13.1 5.2 2 23 733 753 732 753 0.96
16 40 0.0041 0.22 13.4 0.6 3 23 761 782 759 782 0.96
17 40 7.8e-05 0.0043 18.8 0.8 3 23 793 813 792 813 0.99
18 40 1.1 58 5.8 5.8 1 23 819 842 819 842 0.91
19 40 0.042 2.3 10.2 2.9 1 23 848 870 848 870 0.98
20 40 0.0042 0.23 13.4 0.4 1 23 876 899 876 899 0.95
21 40 0.027 1.5 10.8 2.1 1 23 1049 1072 1049 1072 0.93
22 40 0.54 29 6.7 4.4 2 23 1078 1099 1077 1099 0.97
23 40 0.00012 0.0067 18.2 1.2 2 23 1105 1127 1104 1127 0.95
24 40 0.00032 0.017 16.9 4.4 1 23 1133 1156 1133 1156 0.96
25 40 0.023 1.3 11.0 5.4 2 23 1167 1187 1166 1187 0.95
26 40 0.00053 0.029 16.2 0.6 3 23 1195 1216 1193 1216 0.96
27 40 7.8e-05 0.0043 18.8 0.8 3 23 1227 1247 1226 1247 0.99
28 40 0.48 26 6.9 4.8 1 23 1253 1276 1253 1276 0.91
29 40 0.042 2.3 10.2 2.9 1 23 1282 1304 1282 1304 0.98
30 40 0.0026 0.14 14.0 0.7 1 23 1310 1333 1310 1333 0.96
31 40 0.16 8.7 8.4 1.9 1 19 1482 1500 1482 1505 0.89
32 40 2 1.1e+02 4.9 4.6 2 23 1511 1532 1510 1532 0.96
33 40 2e-05 0.0011 20.7 1.4 2 23 1538 1559 1537 1559 0.97
34 40 0.0099 0.54 12.2 1.0 1 23 1565 1588 1565 1588 0.96
35 40 2 1.1e+02 4.9 4.4 2 23 1599 1619 1599 1619 0.95
36 40 0.0023 0.13 14.2 0.7 3 23 1627 1648 1625 1648 0.95
37 40 0.0009 0.049 15.5 0.1 3 23 1659 1679 1658 1679 0.99
38 40 0.00092 0.05 15.4 0.9 1 23 1685 1708 1685 1708 0.97
39 40 0.00093 0.05 15.4 1.3 1 23 1714 1736 1714 1736 0.98
40 40 0.01 0.54 12.2 0.1 1 23 1742 1765 1742 1765 0.95

Sequence Information

Coding Sequence
ATGGATTTGTCAATAAATATTgacgattttgataaaatgtgTCGAATATGTTTACAATTATCCGAAACATTAATGCCAATTTCGGAATCCGACATTATTAATATGCTTAAAGAATGTACCTCAGTAGATataTCTGAAGATGACGAACTACCAActcaaatttgtaaaatttgttttacacgATTACAAGAttcatttagttttaaaaatttgtgtcaaaaatcggaTTATGAATTGAGGCGAGTGATTGCTGaacataaaaagaataaaaaaattttaaaaaaatgtgacgaGAAAACATTCTTGTTAAAAAATGAACGTTTTAGCATAGATGACGATCCAAAAGGTAATAATTTGGAAACGTTGTCAATTAAATCTGAAGatgatgaaatagaaaataattttaatgatgaaacgttttcgttaaaaaatgaaGAGTTTCATACAAACGACGagaaaaatactgaaaatattgTGGAAAATATTCAAGATAAAAAAGCTAGTGTACGaggaaaaactaaaaacaaaataaaaaagaaaattaaaatacgaACAAAACGTAAAAATGGATTTATATGTGAAAAATGTGATAGAAAATTTGACACGCCTTGGTCTCTTGGTTGGCATTGTAAAAGTACCCATAAAGCGAAAGGAACAAAATGTAGTTACTGTGCCATAATATGTTATCATCCAGAACATTTTAAGGTCCACGAAGAGTCACATACAAATTCGACTATTAAGTGTGAACATTGTGGTAAACAATTTACTAGTAAGACTTTTTTAGCTAGTCATATCTACACTCATACAACCGATCGCCCATTTAAGTGCCCACAATGCGAATCTGCGTTTAAAACTaaacatgttttaaataatcacaTGAAAGTGGTACATGCAGTCAGAAAACCGCCTGTGAAACTCTCAACGTGTCACATATGTGGCAAGACCATTAAATATGAAAACATGAGAGTACACCTTAGGATTCACGCTGAACGTAAAACATTTGATTGTTCAAAGTGCAAAAAAGCATACTTGACAAAAAACGCGTTAAGAAATCACATCAAATTAATTCACGAAAATATCATTCGACagtgtaaaaatttatgtagCGTTTGTGGTCACGGAACTAAATCGCCGGCGGACCTCGTGAGACACATGCGCACACATACGGGTGAGAAACCGTACCAATGTGATAAATGTGAGAAAAGATATCGCACGTCAGATGCATTAAACTCTCATGTTCGGCACATACATTTAAATGAACGGAAACATGTGTGTTCAGTTTGTTCGCAGGCGTTTCACGTGAGAAGAGTACTCGAGAATCATATGCGCAGGCATACCGGTGAACGGCCATTTGTATGTTTTGTTTGCGGTAAAACGTTTGGTTTTAAGatatcGGAGAATGATGAGCTACCTAATCAAATTTGCCAGTGTTGTTTTGCACGGTTACAAGAttcatttaatttcaaaaatttgtgtaTAAAGTCGGATTATAATTTGAGACAAGTAATTGCTGAACataaaaagaataaacaaaatgaaGGTTCGGTAGAATGTAACGAGAAAACGTTGttaaaaaatgaagtttttagTATTGATGAcgaactaaaaaattataattctgaAACGCTGTCAGTTAAGTCTGAAGATTTACTTGCGGATGATCAAATAGAAAACACTTGCAATGATGAAACGCTTTCATTAAAAGATGAAGAATTGCATACAAATGACGAGAAAAAGAATGAAAATATTGATGGAAATATACAAGAGGGAAAGTCTAGTTCATCggaaaaaacgaaaaagaaaaccGACAAGAAAACCAAAAGTCGAACAAACCTTAAAAAACCATTTGCATGTGAAAAATGTGATAGGAAATTTGATTCGCCTTGGTTTCTTGGTTGGCATTGTAAAGGTACCCATAAAACGAAAGGAACAAAATGTCGTTACTGTTCAGTAATATGTTATCATCCAGCACATTTGAAGGTCCATGAAGAGACACACACAAAGTTAACTATTAAATGTGAACATTGCGACAAAAAATTCGCTTATATGAGTTCTTTAACTAGCCATATCTACACTCATACAACCGATCGCTCATTTAAGTGTGTACAGTGCGATGCGGCGTATAAATCTAAAAGCGGTTTAAATGTTCACATGAAAGCGATGCATGCACTCGAAAAACAGCCTGTAAAACGCTCATCATGCCATATATGCGGAAAGACATACTCGCATAAAAGCTTGAGAAAACATTTAAAGATTCATGCTGAACGTAAACCACTTGATTGTCCAAAGTGTGAAAGAAAGTGTCCGTCAAAAGAAGCATTAGCAAGTCACATTAAACGAATTCATGAGTATGTCACCGCAGCGTGTAAAAATTTGTGTAACGTATGCGGTCGCGGTACCAAAACGAGAACGGAACTCGTAAAGCACATGCGAACACACACAAGTGAAAAACCATTCCAGTGTAACAAATGTGAAAAGAGGTATCGGACCGCATACGGGTTAAGTTGCCATGTTAAGCACACACATTTAAATGAACGGAAACATGTGTGTTCAGTTTGTTCGCAGGCGTTTCACGAGAGGAAAGTACTGATTAATCATATGCGTAGACACACCGGTGAACGGCCATTTGCATGTTTTGTTTGTGGTAAAACGTTCGGTTTTAAAGTTTCTATGCAAATTCATCTGAAACAAGTGCATAAGataTCGGAAGATGATGAACTTCCTAATCAAATTTGCGATACTTGTTTGAATCGCCTACAAGActcatataattttcaaaatttgtgtaaaaaatcGGATTATTATTTGAGGCGAGTAATTGCTGAACATAAGGAaaataaacagaataaaaatgtagaAGAAGAATGTGACGATAAAACGTTCTTATTAAAAGATGAAATTATTAATCTAGATAACGATCTAAAAGATTATAATTTAGAAACGTTGTCAATTAAATCTGAAGATTTACCTGCAGATGACGAAATAGAAAACAATTATAATGAtgaaacattttctttaaaaaatgaaGAGATACATACTGATGACGAGAAAACCAATgaaaatattgatgaaaataTTGAAGAAGCTAAAACTAAATCTAAAACAAAGAAGAAAACCAAAACACGAAcaaaacttaaaaagttatttacatGTGAAAAATGTGACAGGAAATTTGATTCGCCTTGGTCTCTCGGTTGGCATTGTAGAAGAACCCATAAAACGAAAGGAACAAAATGCAGTTATTGTTCAGTAATATGTTATCACCCAGTACATTTAAAGGTCCACGAAGAGACACATAcaaatttaactattaaatgTGAACATTGCGATAAAAAATTCGCTTATATGAGTTCATTAACTAGTCATATTATGTACGCTCATTCAACCGATCGCCCATTTAAGTGTTCCCAGTGCGATTCAGCATTCAAGACTAAACATCATTTAAATGATCACATGAAAGCGATACATGCACTTGAAAAACAGCCTGTAAAACGCTCATCATGTCATATATGTGAAAAGACATTCTCGCATAAAAGCTTGAGAACACATTTAAAGATTCATGCTGAACGTAAACCACTTGATTGtccaaaatgtgaaaaaaagtgTCCGTCAAAAGAAGCATTAGCAAATCACATTAGACGAATTCATGAGTATGTCACCGCAGCGTGTAAAAATTTGTGTAACGTGTGTGGTCGCGGTACCAAAACGAGAACGGAACTCGTGAAACACATGCGAACACACACCGATGAAAAACCGTTCCAGTGTAACGAATGTGAAAAGAGGTATCGGACCGCATACGGGTTAAGTTGCCACGTTAAGCACACACATTTAAATGAACGGAAACATGTGTGTTCAGTTTGTTCGCAGGCGTTTCACGAGAGGAAAGTACTGATTAATCATATGCGTAGACATACCGGTGAACGGCCATTTTCATGTTTTGTTTGTGGTAAAACGttcggtttcaaagtttctatGCAAATTCATCTGAAACAAGTGCATAAGataTCGGAAGATGATGAACTTCCTAATCAAATTTGTGATACTTGTTTGAATCGCCTACAAGActcatataattttcaaaatttgtgtaaaaaatcGGATTATGATTTGAGGCGAGTAATTGCTGaacataagaaaaataaacagaataaaaatgtagaAGAAGAACGTGACGATAAAACGTTCTTGTTAAAAGATGAAGTTCTTAATCTGGATAACGATCTAAAAGATTATAATTTAGAAACGTTGTCAATTAAATCGGAAGATTTACCTGCAGATGACGAAATAGAAAACAATTATAATGATGAaacattttcgttaaaaaatgaaGAGACGCATACTGATGACGAGAAAACCAATGAAAGTATTGTTGAAAACATTGAAGAGGATAAAACTAAACATAAAACAAAGAAATCGAAAACAGGAACAAAACGTAAAAAACGATTTATATGTGAAAAATGTGATCGAAAATTTGATACACCTCAGTATCTTGGTTGGCATTGTAAAGGGACTCATAAAGCGAAAGGAACAAAATGCAGTTATTGTAATGTAATATGTTATCATCCACTACATTTAAAAGTCCACGAAGAGTCACACACAAATTCGACTATTAAGTGTGAACATTGTGGCAAGATGTTTGCTAGTAATGCCTTTTTGAATAGCCATATGTACACTCATAAAACCGATCGTCCATTCAAGTGTGAACAGTGCAATTCCGCGTTTAAGactaaatatgttttaaatggcCACATAAAAGCGAAACATACAGTCGAGAAAAAGCCTGCGAAACTCGCAACGTGTCACATATGTGGCAAGACCGTTAAGTTTAGAAACATAAAAATACACCATAGGGTTCACGCTGAACGTAATCCACTTGACTGTCCAaagtgtgaaaaaaaatttcttacaaaAGACACGTTAAAAAATCACATTAAACTAATACACGAAAATATTAACACAGTGCGTCACATTTTGTGTAACGTGTGTGGTCTCAAAATTAAATCGGCAGCGGACCTCCAGAGACACATGCTAACACACACCGGTGAGAAACCGTTCCAGTGTGATAAATGTGAAAATCGGTATCGAACTTCAGACGCATTAAAAACGCATGTTCGCaatgtacatttaaatataCGGGAACATGTGTGTTCAGTTTGTTCGCAGGCGTTTTACGACAAAAAGGTACTCGCGAATCATATGCGCCGGCACACCGGTGAACGGCCGTTTGCGTGTTTTATTTGTGGTAAAACGTTTGCCGCTAAAGCTGCTGTATATATTCATTTGAGGCAAGTGCATAAGGTGGAAAAAAAACCTACAGAGCATAATATGAGCagcgaataa
Protein Sequence
MDLSINIDDFDKMCRICLQLSETLMPISESDIINMLKECTSVDISEDDELPTQICKICFTRLQDSFSFKNLCQKSDYELRRVIAEHKKNKKILKKCDEKTFLLKNERFSIDDDPKGNNLETLSIKSEDDEIENNFNDETFSLKNEEFHTNDEKNTENIVENIQDKKASVRGKTKNKIKKKIKIRTKRKNGFICEKCDRKFDTPWSLGWHCKSTHKAKGTKCSYCAIICYHPEHFKVHEESHTNSTIKCEHCGKQFTSKTFLASHIYTHTTDRPFKCPQCESAFKTKHVLNNHMKVVHAVRKPPVKLSTCHICGKTIKYENMRVHLRIHAERKTFDCSKCKKAYLTKNALRNHIKLIHENIIRQCKNLCSVCGHGTKSPADLVRHMRTHTGEKPYQCDKCEKRYRTSDALNSHVRHIHLNERKHVCSVCSQAFHVRRVLENHMRRHTGERPFVCFVCGKTFGFKISENDELPNQICQCCFARLQDSFNFKNLCIKSDYNLRQVIAEHKKNKQNEGSVECNEKTLLKNEVFSIDDELKNYNSETLSVKSEDLLADDQIENTCNDETLSLKDEELHTNDEKKNENIDGNIQEGKSSSSEKTKKKTDKKTKSRTNLKKPFACEKCDRKFDSPWFLGWHCKGTHKTKGTKCRYCSVICYHPAHLKVHEETHTKLTIKCEHCDKKFAYMSSLTSHIYTHTTDRSFKCVQCDAAYKSKSGLNVHMKAMHALEKQPVKRSSCHICGKTYSHKSLRKHLKIHAERKPLDCPKCERKCPSKEALASHIKRIHEYVTAACKNLCNVCGRGTKTRTELVKHMRTHTSEKPFQCNKCEKRYRTAYGLSCHVKHTHLNERKHVCSVCSQAFHERKVLINHMRRHTGERPFACFVCGKTFGFKVSMQIHLKQVHKISEDDELPNQICDTCLNRLQDSYNFQNLCKKSDYYLRRVIAEHKENKQNKNVEEECDDKTFLLKDEIINLDNDLKDYNLETLSIKSEDLPADDEIENNYNDETFSLKNEEIHTDDEKTNENIDENIEEAKTKSKTKKKTKTRTKLKKLFTCEKCDRKFDSPWSLGWHCRRTHKTKGTKCSYCSVICYHPVHLKVHEETHTNLTIKCEHCDKKFAYMSSLTSHIMYAHSTDRPFKCSQCDSAFKTKHHLNDHMKAIHALEKQPVKRSSCHICEKTFSHKSLRTHLKIHAERKPLDCPKCEKKCPSKEALANHIRRIHEYVTAACKNLCNVCGRGTKTRTELVKHMRTHTDEKPFQCNECEKRYRTAYGLSCHVKHTHLNERKHVCSVCSQAFHERKVLINHMRRHTGERPFSCFVCGKTFGFKVSMQIHLKQVHKISEDDELPNQICDTCLNRLQDSYNFQNLCKKSDYDLRRVIAEHKKNKQNKNVEEERDDKTFLLKDEVLNLDNDLKDYNLETLSIKSEDLPADDEIENNYNDETFSLKNEETHTDDEKTNESIVENIEEDKTKHKTKKSKTGTKRKKRFICEKCDRKFDTPQYLGWHCKGTHKAKGTKCSYCNVICYHPLHLKVHEESHTNSTIKCEHCGKMFASNAFLNSHMYTHKTDRPFKCEQCNSAFKTKYVLNGHIKAKHTVEKKPAKLATCHICGKTVKFRNIKIHHRVHAERNPLDCPKCEKKFLTKDTLKNHIKLIHENINTVRHILCNVCGLKIKSAADLQRHMLTHTGEKPFQCDKCENRYRTSDALKTHVRNVHLNIREHVCSVCSQAFYDKKVLANHMRRHTGERPFACFICGKTFAAKAAVYIHLRQVHKVEKKPTEHNMSSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-