Bneb012720.1
Basic Information
- Insect
- Brachynemurus nebulosus
- Gene Symbol
- RpS24
- Assembly
- GCA_035578155.1
- Location
- JAPWDM010000002.1:79891766-79896396[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.48 1.5e+03 0.8 0.0 23 44 233 256 212 258 0.82 2 5 8e-11 2.4e-07 32.1 0.2 3 44 266 309 264 310 0.95 3 5 1.4e-05 0.043 15.3 0.1 3 44 319 364 318 366 0.90 4 5 4.1e-14 1.3e-10 42.6 0.0 1 44 372 415 372 417 0.97 5 5 1.7e-11 5.1e-08 34.3 0.7 4 42 428 470 426 471 0.94
Sequence Information
- Coding Sequence
- ATGTCAGGTTTTTCCGACTATTCAATATTACCTGATTATTTTGCATCAGAAAAAGAAgatattaagaaattgaatgCTGTACTGAAAGCAGAAACTTCAGTAACAGAATCGgacTCTGATGAAATTGTGTCAAGTAGTGATGATGAAGAAGTGATCAGTCAAGAAAAAGAGCCGGATGTTAATAAAGATATTGacagtttaaatattaatttttcgttagACTCGTCGTATAATGACCAAGTCGATTCGTATATATCGAAAATTAATGCGATAGATGTCAATAAAGTGTTACTGTTGAATAAAACGCAACAGATGCTTTTATTGGAGGGCATTAAGAAATACGAAGAACTTTTGGATGAGTGTAACGCACAAATTGAAGCCGTTGGACACTCCATCAAACGATTTATGCGGGACATCAGATTGAAGACAccaacttttttcaaatttggtatGCCATTTTTTAAAACGAAAACAGGTTACTCATGTCCGTTAAATAATGACGCgttgaaaaagaaagaaaatggtGAAGTGGCCATTGTCGATTTGCCCCCGTTAAAATTTTGGTTGTCCGATGAAAAAGAAATTCTACGAAAAAGTGTAATGGAACAATCCAAACAATTgttacaatcgaaaaaaaagaaaggcgCTAATAACGAAGTTGTTTTCCCGTTGTCCGAAAATAATGCACCCAttgattggttaaaaatttcCGTGCAAAATTTGAAAGGTCGTCATACAGATGACGAGTGTAAGGCGATGTGGTATTCCATCGTACATCCACACCTAAACAATTCACCGTGGGGCCCCAAGGAGGTGGAGCGCCTCAAGGAGCTCGTCATTAAACATAAATATCAAGATTGGGAACAAATAGCTGAGGAATTGAAGACAAATCGATCTGGTTACGCGTGTTTCTTATATTTCCAATTACACTGTCAGAAAAACAAAGGAGTCAGAAAATGGACACCCGatgatgataaaattttactcgAAACCGTGGAACGATGCCGAATCGGGAGTTTCATACCCTGGAGTAAGGTTAGTTATTACATAAAAGATTGGTCCAAAACCCAAATATATTGCCGATACAACAACAGCCTCTGTCATCGTATCAAAAAAGGCAAATTTTCCCGAGAAGAAGACTTATTAATAGCCGCGTTGgttaaaaaagtaggtaaaaaCTTCGCGAAAATCTCCACTTTCATTCCCGGTCGCACATCAGCCCAACTTCGGGACCGATACAACAATTCCTTAAGAGACGCACGCCAAAGTGAGTTCCGAATGTGGACGATCGAAGAGGATCAACAGATCATTGATTTTGTCAAAAAGTACGGCACAAAAAAATGGAGCCTTCTAGAAAAAATGTTCAAAGACACCACGTTTCGATCCCGAACGAATATTCGACATCGTTGGGCCATTATCAGAAAATACATCAACCCAGAAACGTTTGAAGGTGACGTGAATAAAATACCCCGGCTGAAAGCGAAAACGAAAGCGAAAAGAGTTTCCTCGATTATGGTCCGACGAATGATTCAAAAACTAGAAAATATGGAGGAAAACGTTCAAAATCCGGCAAGTATGTTGTCGGCCGCCAAAAATCTTGGCAACGCCTACGACAAAGACGGCATTAGCGAGagtttcaataaatatttcatctcAAGTTTCTACTATCTGAAATCCACGAGCGAATATCGCGAAATTGATCTGATAAATAGCCTGTTCATCCTTATGCTCCTCGAAGCTCAAATAAATCTCACCCACGTATCAAATATCCTCTTAAAATACCTGGATCAAATCGAACACTACATCAATTTCGGTTTGAAAACAGTCATCAACCAAATGCAAGAAAATCCACACGAAAAACTCATCCATTTCTTCAATAAATATTGGCAAAATCATTATGGCACGTCCGTCTTAACCAACCTCTTCCCATTCCCGGAAAAATTGGCAACAAACAAAGAATTTGAACGTGCCTTAATAACACTACGATCTCTAATCAAATACGTATATTGGACCGAATCAAATTTGGATCAGTTCTATACGAAAAAATATGGCCAATTTGTACATTTGGCCGAAACAACTCCCCACCTAGTGGAATTCGAATCGAAATATGAAAAATTGGTGGTCGACACTGAAATCCATTTAGACGAAATTTGCACAACAAAAAAATGCCAAGATTTTTATACTCAGAATGTTAATACTGAACCGAAAATTCCCCAACTGAAAACCACATTTAAATTACGATTTTTAGCATTATTCACAATACCAAACTTTAAAAGGTATGCGGAGAAAATTCTCGCGACAACTGTTGACGCCGTGGAAGAAATCAGTTTCGTAGACGTGAAAGAAGTCAAAGAGCACGAGTCGGCCAAAACAGAGAAGAAACGTGGACGACCCCCAAAAAAATTACCAGGAGGGCGATTAAAATACccaaagaatattaaaaataaggaaaataaaGAGGATCCTTTAAATGAAGCAATGAACTCCGAAAATGATACTAGTGGTGTATTAATTCAAGAAATTAAACAAGAACCAGGAACTGCTTGTGAGGAAGTGAAAAAAGTGAGAGGACGTCCTCGAAAAAGACTTAAATTAGCAGATCAACCTGAAGGAACGGCAACAGTACGTACTCGAAAATTTATGACCAATCGATTGCTATGTCGAAAACAAATGGTGTGCGATGTGTTCCATCCGGGACAACCATCAGTGAGAAAATCGGAAATTCGtgaaaaattagcaaaaatgtACAAAGTGACGCCCGATGTGGTGTTCGTTTTCGGTTTTCGAACCAATTTCGGTGGCGGCAAATCAACCGGATTCGCTCTAATCTACGACACGTTAGACTGGGCCAAAAAATTCGAACCAAAACATCGATTACAACGGCACGGATTGTACGAGAAGAAACAACAGACCCGTAAACAACGTAAAGAACGTAAGAACAGAATGAAGAAAGTGCGCGGCACGAAGAAGAGTAAAGTGGGCGCGGCGACtaagaaataa
- Protein Sequence
- MSGFSDYSILPDYFASEKEDIKKLNAVLKAETSVTESDSDEIVSSSDDEEVISQEKEPDVNKDIDSLNINFSLDSSYNDQVDSYISKINAIDVNKVLLLNKTQQMLLLEGIKKYEELLDECNAQIEAVGHSIKRFMRDIRLKTPTFFKFGMPFFKTKTGYSCPLNNDALKKKENGEVAIVDLPPLKFWLSDEKEILRKSVMEQSKQLLQSKKKKGANNEVVFPLSENNAPIDWLKISVQNLKGRHTDDECKAMWYSIVHPHLNNSPWGPKEVERLKELVIKHKYQDWEQIAEELKTNRSGYACFLYFQLHCQKNKGVRKWTPDDDKILLETVERCRIGSFIPWSKVSYYIKDWSKTQIYCRYNNSLCHRIKKGKFSREEDLLIAALVKKVGKNFAKISTFIPGRTSAQLRDRYNNSLRDARQSEFRMWTIEEDQQIIDFVKKYGTKKWSLLEKMFKDTTFRSRTNIRHRWAIIRKYINPETFEGDVNKIPRLKAKTKAKRVSSIMVRRMIQKLENMEENVQNPASMLSAAKNLGNAYDKDGISESFNKYFISSFYYLKSTSEYREIDLINSLFILMLLEAQINLTHVSNILLKYLDQIEHYINFGLKTVINQMQENPHEKLIHFFNKYWQNHYGTSVLTNLFPFPEKLATNKEFERALITLRSLIKYVYWTESNLDQFYTKKYGQFVHLAETTPHLVEFESKYEKLVVDTEIHLDEICTTKKCQDFYTQNVNTEPKIPQLKTTFKLRFLALFTIPNFKRYAEKILATTVDAVEEISFVDVKEVKEHESAKTEKKRGRPPKKLPGGRLKYPKNIKNKENKEDPLNEAMNSENDTSGVLIQEIKQEPGTACEEVKKVRGRPRKRLKLADQPEGTATVRTRKFMTNRLLCRKQMVCDVFHPGQPSVRKSEIREKLAKMYKVTPDVVFVFGFRTNFGGGKSTGFALIYDTLDWAKKFEPKHRLQRHGLYEKKQQTRKQRKERKNRMKKVRGTKKSKVGAATKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -