Bvim013094.1
Basic Information
- Insect
- Brachylomia viminalis
- Gene Symbol
- nfxl1
- Assembly
- GCA_937001565.2
- Location
- CAKZJP020000118.1:3460141-3462615[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 3 5.6e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.016 2.9e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 4.7e-07 0.0087 17.6 15.9 3 19 186 202 185 202 0.95 4 19 3 5.6e+04 -5.5 1.2 6 10 227 231 227 231 0.69 5 19 1.5e-07 0.0028 19.2 10.6 3 19 239 255 237 255 0.92 6 19 2.5 4.7e+04 -3.9 1.9 6 10 280 284 279 284 0.83 7 19 2.1e-08 0.00039 22.0 11.3 1 19 290 308 290 308 0.99 8 19 6.6e-06 0.12 14.0 19.0 3 19 345 361 337 361 0.86 9 19 1.9 3.5e+04 -3.4 0.4 7 11 365 369 365 369 0.84 10 19 2.8 5.3e+04 -4.0 0.9 5 10 384 389 384 389 0.89 11 19 0.0001 1.9 10.2 20.3 1 18 395 412 395 413 0.97 12 19 6.7e-10 1.2e-05 26.7 14.0 1 19 422 440 422 440 0.99 13 19 0.00023 4.3 9.0 6.9 9 19 488 498 486 498 0.89 14 19 0.11 2.1e+03 0.4 9.9 1 12 508 518 508 518 0.90 15 19 0.47 8.7e+03 -1.5 3.5 14 18 547 551 547 552 0.87 16 19 0.18 3.4e+03 -0.2 0.5 7 12 567 572 567 579 0.83 17 19 1.4e-05 0.25 13.0 5.3 1 11 588 598 588 599 0.97 18 19 0.0016 30 6.4 14.1 4 18 630 645 628 646 0.84 19 19 4.2e-06 0.078 14.6 11.1 1 18 687 705 687 706 0.89
Sequence Information
- Coding Sequence
- ATGGAGCGCCGATACCGAGACGCAGCTGCAAAATTGCAGCAAAACGTCCAGAAACATCTAAAAGTAATGAAAGAACTGTCGTCGTCTGAAGATGAGGATCCTTGCGAATCCAATGTCTTGGAAAGCATGTTCCAGAGCTACTGGCGCGGCGGCGGAGACACACAAATGCTGAACAGGACCAAAAACCTTCTTGAAGAAGCCATAAGCGGCCGTTCGGTTACGTGTCTTATATGCATAGGATCGATAAAAAAATCTCACGCTATATGGACTTGTGATCATTGTTTTTCATACTTCCATCTATCTTGCATTCAAAAATGGGCGAATGATAGTATAAGCTTGCGCAGTGAAGAAAGTACGGGCCCGATAGCTgttataaaacaacaaaaaatcgAATGGTGTTGCCCTAAGTGCCGAAACTCTTATACTAAGGAAGAAATCCCCCGTAAATATCGCTGTTTCTGCGGCCAAACTGATGACCCATCACACCATCCCTGGCTCATTCCTCATACCTGTGGTGAAGTCTGTGGAAAGAGGTTGTCTACAGGTGAAAATTGTAAACACAAGTGCTTGCTGCTATGCCACCCTGGTCCCTGCCCTCCGTGCCCACAAACTGTCAATGGCAAATGTTTCTGTGAGAAGGAATGTAAGAGAGTGAGATGCAGCACTGCTAAATGGTCCTGTGGCCAACTTTGTAAGAAAACTCTTTTGTGTAAGTCTCATTATTGTGAAAATGTCTGTCATGCTGGTGATTGTCCTCAATGTAGCTACACTAGTATGCAGCAATGTCTATGTGGTTCAGAGAAAGCTAAAAGACCATGTAATGATCCATTCTGGCAGTGTAAGAAGCCTTGTAACAAGCAATTTTCCTGTGGCTACCATAAATGTGAGATTATCTGTCATTCTGGCAACTGTGGAGATTGCCCCAACTCTGGAACTTTATCATGTCCCTGTGGAGCTAACCAGCGCTTTGTCCAATGTCCAGATGTTATGGAAACATGCCTAGGTACATGTGGTAAGAGGCATGAAGATTGTGAGCATAAGTGCCCAGAAAAGTGCCACAATGGTAACTGTCCACCTTGCCAAGTTTTAATTGAGAAGAAATGTCACTGTTCTACACATACAAGGCCCCTTCCTTGTAGCAAGGACTTCAAATGTGATTCTAAATGTCGTGGGATAAGGCTATGTGGCAAACATGGTTGTGGAAGAAAATGCTGTAATGGGAATTGCCCTCCATGTGAGAAAATATGTGACAAAGGTCTCCACTGTGGTCGGCATAAATGCACAAATATCTGTCATCGTGGACCATGCTATCCATGCCCTTTAGAATCGAAAGTAACATGCAGATGCAAAGAAACTTATGTAAGCGTCCCATGTGGAAGGGAACGGCAGACAAAACCTCCAAAATGCAACTTGCcctgcaaaattaaatataaatgtggTCACAGTGAAGAAAATAAACACTCCTGTCACTATGGTGACTGTCCCCCTTGCAAAGCAATCTGTGACAAGGACTATCCTAAGTGTAGTCACCATTGTAAAGCGGTATGCCATGAATATGTTGCAGTGCtgttcaaacaagttgaaaaaCCTGCTACTCCTTGGGAGGTACAACCACCAAAGACTAAGATTATGACCTTAGATTGTCCACCATGTGAAACACCTGTACCAATGGTTTGTTTTGGAGAGCATGAGACGGACCAGCAGCCTTGTCACACAGCTTCACGAAGGCCTTGTGGAAGAGAATGTGGAAAACCTTTGGCTTGTGGAAACCACAAGTGCACTTTACTCTGTCATCTTTACAGCCCTGTTCCAGAATACCCAAATGTGCCTTCAACTTGTAAGCAATGTAATAGAGAATGTTCAGTTCAGCGCCCTCAAAAATGTGCTCATAAATGCTCTATTAGAGGCTGTCATCCTGGTCCTTGCCGGCCATGTGAGATACTTGAACGCTTAGCTTGCCACTGCGGGGTAACAGAGATATACTTACGCTGCCGAGAATTGTCTGCAGCTACCGAAGAAATGCTGTCATGCAAGCAACAATGTCCAAAGAACTTAGACTGTGGCCATCGCTGCCGCAACATGTGCCATTCAGGAGATTGCGGCAACCAAGTATGCACTAAGAAAACTAAAGTGCACTGTCCATGTGGTAGTATAAAGAAGGAGGCTCCTTGCAACTCAGTCAGAAATGGGGACACTAAAATACTGTGTGACAATACCTGTGAAGCTAAGAAAGCTGCTGCTAAAATAGAGCAAGAGAAAGAGAAACAGAGATTGAAAAAGCTAGAGGAAGAAAAGAATCGCAAAGAGTTAGCAGAGTATGAGTGGAAACTAAGCGGTAAGAAGAAGAAGTATAAGGAAAAGAAAATGGTGGTTGGTAAAGATGACCGAGGATTCCTAAATAGGTATTGGGTACCAATATCATCGTTTCTAGTTATGATGCTAGCGgctatttattatatattttatactatatAG
- Protein Sequence
- MERRYRDAAAKLQQNVQKHLKVMKELSSSEDEDPCESNVLESMFQSYWRGGGDTQMLNRTKNLLEEAISGRSVTCLICIGSIKKSHAIWTCDHCFSYFHLSCIQKWANDSISLRSEESTGPIAVIKQQKIEWCCPKCRNSYTKEEIPRKYRCFCGQTDDPSHHPWLIPHTCGEVCGKRLSTGENCKHKCLLLCHPGPCPPCPQTVNGKCFCEKECKRVRCSTAKWSCGQLCKKTLLCKSHYCENVCHAGDCPQCSYTSMQQCLCGSEKAKRPCNDPFWQCKKPCNKQFSCGYHKCEIICHSGNCGDCPNSGTLSCPCGANQRFVQCPDVMETCLGTCGKRHEDCEHKCPEKCHNGNCPPCQVLIEKKCHCSTHTRPLPCSKDFKCDSKCRGIRLCGKHGCGRKCCNGNCPPCEKICDKGLHCGRHKCTNICHRGPCYPCPLESKVTCRCKETYVSVPCGRERQTKPPKCNLPCKIKYKCGHSEENKHSCHYGDCPPCKAICDKDYPKCSHHCKAVCHEYVAVLFKQVEKPATPWEVQPPKTKIMTLDCPPCETPVPMVCFGEHETDQQPCHTASRRPCGRECGKPLACGNHKCTLLCHLYSPVPEYPNVPSTCKQCNRECSVQRPQKCAHKCSIRGCHPGPCRPCEILERLACHCGVTEIYLRCRELSAATEEMLSCKQQCPKNLDCGHRCRNMCHSGDCGNQVCTKKTKVHCPCGSIKKEAPCNSVRNGDTKILCDNTCEAKKAAAKIEQEKEKQRLKKLEEEKNRKELAEYEWKLSGKKKKYKEKKMVVGKDDRGFLNRYWVPISSFLVMMLAAIYYIFYTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00932106;
- 90% Identity
- iTF_01440670;
- 80% Identity
- -