Basic Information

Insect: Brachylomia viminalis
Gene Symbol: -
Assembly: GCA_937001565.2
Location: CAKZJP020000232.1:371916-381855[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 9.1e-05 0.013 17.5 2.5 1 23 2058 2080 2058 2080 0.99

2 5 2.6e-05 0.0036 19.2 4.9 1 23 2086 2108 2086 2108 0.98

3 5 5.7e-06 0.00081 21.3 4.3 1 23 2114 2136 2114 2136 0.98

4 5 0.18 26 7.1 3.1 1 23 2142 2164 2142 2164 0.97

5 5 0.00032 0.046 15.8 0.1 1 22 2170 2191 2170 2191 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	9.1e-05	0.013	17.5	2.5	1	23	2058	2080	2058	2080	0.99
2	5	2.6e-05	0.0036	19.2	4.9	1	23	2086	2108	2086	2108	0.98
3	5	5.7e-06	0.00081	21.3	4.3	1	23	2114	2136	2114	2136	0.98
4	5	0.18	26	7.1	3.1	1	23	2142	2164	2142	2164	0.97
5	5	0.00032	0.046	15.8	0.1	1	22	2170	2191	2170	2191	0.96

Sequence Information

Coding Sequence: ATGCTCCTTATCGACAATGATCTGTGGGATTGTGTGCAAGATACGTTCAGTGCGACCTCAAATGAGTTGGTGAAGCGTGATGCTAGAGCAAGAGCCAAGATCTGCCTGATGCTTTCGGAAGGCATCTACCCCCTTGTGACGGAAGCAAAGACGGCACGGGAGACTTGGCTGGCACTAAAAAATGCCTATGCGGATGCTGGACTAATGCGGAGGCTTTCCTTGCTGCGAAAAATGTTTCGCATCAAGTTAGAATCATACCCAAGTATGGAAGCCTACGTCACGGAAGTTCGAGGAATTCAGCAGCAGCTGCGAAGCATTGGTGCCGGACTTGACGATGAGTTTGTCGGAATAATAATGCTGGCGGGATTGACGGACAAATACAATCCGTTAGTAATGGCCATAGAGCATTCCCGCTCGACAATTACCTCAGAACTGGTTATATCAGCACTTCTGAAGGAGGGTCAACGTCAAGAGTCGAATGAGGCCCCAAAGGATGATTCGGCGTTAGCATCTAGCGCTGGTGGTAGTGGGGGAAGAGACCACACCAGAGAGATTGTTTGTCACTTCTGCAAACGGAAGGGCCATTTCAAGTGGCAATGCAAGCAGTTCAAGGCCAAGCAGCCGGATAAGAAGAAATCAAATGCGCATTCGGCCATGGTCACCAGTGTGAACGCGAACTCAGACTTTTTGACCTTGTTGTCATCTGTAGGTAGCAGTGATAACTGGGTGTTGGATTCAGGAGCCACGTCCCACATGACACCGGTGAAATCCCTCTTGAACCCCACGAAATCTTGCTCCAAAATGATAACTTGCGCGAATAGCGAAAAAATTGTTTCAACTTCGCAAGGTTCTGTGGAGTTAAACCTGCGTAATGGGGAACGTGACACTGTAGTGAAGATGAATGATGTTCTTCACATTCCTGAACTAATTACCAATTTAATGTCTGTAGGAAGGTTTGCAGATGCaggaaatattattgtttttgataaaaccaaatgtagtgtttttaacaataatgtaaaaataGATGGTAAGGCATTGTTTACCGCACCGCGCCAAAACGGGCTTTATGTTTTAGGTTCCGGTTGTAATCAGGCGACAGCTTTTTTAGGGGAAGATAATCAGAACAAGTTTGAATTATGGCACCGGAGATTGGGCCATTTGTCTCCCGCGCAAATGCAGATTTTGAAAAGAATTGTCAAGGGCCTCGATTACGGCAAAAAGGGTGATGGAGCCCCTTGCATTCCTTGTAGTCAAGGAAAGCAGTGCGTAAAAAAGTTTCCTAAACGGAAGAAGTCTTTTAGAGCCTCCGGCATGCTGGACCTAATACATAGCGACCTAGCTGGTCCAATAGATGTGGAGACTTGGGGAGGAAACAGATATGTCCTCCTGTTCATTGACGACTTTAGCCGAAAGGTTTTCGGTTACGTCATAAAGCAAAAGACTGAGGTGTTAGAGAAGTTCAAGGAGTTCAAGCGTCTGGTAGAGAACCAAAccgaaaagaaaattaaacggTTTAGAAGCGATAATGGTACTGAGTATACCAATAAGGAGTTCCAGGCTTATTTGGCCAAATGTGGAATTGCGCACCAGACGAGCGTTACTCATACTCCTCAACAGAATGGAGTTGCGGAAAGGACGATCCGCACCATTACTGAAAAGGCAAGATGCATGCTCCATGACAGTAACCTAAGTAAACGGTACTGGGGAGAAGCGGTGGGGACTGCGATCTATTTGAAAAATCGCTCACCCACATTAGCAATCGCCGGGAAAGTTCCCGAAGAAGTTTGGACAAATCATGAGGTGGATCTTAccaatttaaaagtttttggttCCACAGCTCAGGTTTTGGTGAAAGATAATAGCCGAAGGAAATTTGACTCCAAGACCCGTGAGCTTGTCTTCGTTGGGTACAGTGAAGTGCAAAAGGGATACAGATTTGTCGACCCGGTCAATCCGCGCCGCATAATAATTGCTCGCGACGCCGTGTTTGACGAGCGGTCAAAAGTAATCAAGGAGATTAAACCCCCTGAGCGCAGTGCACAGGTTTCGAGGAAGAAATCGAGGCGAGAATATGTAGAGGTACCAATTTTTGGTGAGGCAGATACTGCTCAAGGCACTTCTAGGGCTGCGGCGCCTGAGGATGGCCCAAGCCAGAGTAACATGGTTATGACACCAAGTTCATCGCCCACTATTGTTGAAGAAGAGTTTCACGACTCTTTCGAAGAACCGTCAACAGAGCCGGTTCAAGCTGTAGAGGAGCCTGAGGAACGGCGTTATCCTCTAAGAAATAGAGTCAGAAGAATAGATGAAGACATGGTATACAACTTCCATGTCGCGAATGATCCTGACCCGATTTCGGTTATGGATGCTATGAAGCGTTCTGATAAAGACCTGTGGAAGAAAGCTATGAAAGAGGAATACGACTCTCTTATGGAGAATCAGACTTGGGAGCTCGCCGATCGTCCCAGAGACGCTAATGTCGTCAAAAATAAATGGATTTTTAAGTTGAAAATCGGAGCAGATGGAAAGGTTCAACGGCATAAGGCTCGCCTTGTTGCCAAGGGTTACTCTCAAAAGTTTGGAGAAGATTATACCGAGACCTTTGCTCCCGTAGTCAAGCTCTCTTCCATTAGGCTTCTGCTGGGATTATCAGCAGAATTGGATTTAAATGTACACCAAATTGATGTCACCACAGCATTTTTAAATGGTGATTTGGATGAGGATCTGTACATGGAGCAACCTGAATCTTTCATAAAAAAGGGAAATGAAAAGAAAGTATGCAAGCTGAAGAGAGCCATCTATGGTCTCAAACAAGCTGCACGTTGCTGGAACGTCAAAGTACATGATCATATCATTAAAAGTGGTTTTACGAGATCGAAGTATGATCCGTGCGTGTACATTAAAAAAGGAAATGATAATACCTTGATTGCAATCGCACTTTATGTCGACGACTTCTATATTTTTGGAAGTTCAGTGGTGGACATAGAAAGAGTCAAAAGGACAATCGCAAAAGCGTTCAAAACTAAAGATTTAGGTGAGGCCAAGGATTGTTTAGGGATCCATATCACGCGATCCAATGGGCAGATATCCCTATCACAGGCAAGCTTCGCCAAAAGGATTCTAGAAAAATATGGAATGCAAGACTGCAAGCCGGTAGCTACTCCAATGGAATTGAATCTACGACTTGCAAAGGGGGAAAGGCGTGAGGATTTTTCTTTCCAAGAAATAATAGGATCGCTCATGTATCTATCCTGCGGTACAAGGCCTGATTTGACATTTGCGGTCAGCTATTTGAGCCAGTTTAATACATGCTGGGATGAACAGCACATGACTGTGCTCAAGCGGGTGCTCAGGTACTTAAAGGGCACCGTGGACTATAAACTAGTCTATAAAAGAACAGGCAAACCCCTGGTTGCATACTCGGACGCTGATTGGGGAGCCAACGCCGATGGGCACTCATTTACTGGTTATGCCCTTATTTTTGGTGGAGGTGCTGTGTCCTGGCAAGCTCGCAAACAGCGATGCGTAGCCTTAAGCACAGCTGAGGCTGAATATATAGCCATCTGCGAAACCTCAAAAGAAGTAGTCTGCGTTAAAGGCTTATTGGAAGAGCTAGCTGGAGTCAACGCCGGCGTTACAGTGTTCAGCGACAGTCAGAGTGCAAGTAAATTAGTGTACTCTTCTGTGATTGGTAGAAGGTCGAAGCACATCAACATACGCTACCATTTCATAAGAGAGTTGGCTGAAACTGGTTCAACAAGCGAGGAAGTTCCAAGCACCACGGTGGTGGGTCACACCGGTAGTCCCGGCGGCGCAGACGTGGTGATCGGCGTGTCCAGCGCGGGCGCATACGATGTGACGCGCATGCGCGAGGAAGAGTTCGAGAGGCTCACAGTGTACATCGTGCCCGACGTGCCGAGCGAGCGTGGCACGCCCAACCGCGCCGAGAGGACGCTTCCGCGCAGCCTTGCGCTTAGACCATCTGCAGTATTATCCACTCCAAATACACCGACTGAGGGTGTGTGGAGTATAGGTGTAATACCACGTGGAACACGCTTCGGGCCCTTCGAAGGCACCCGAACACCGAACAAACCTAATGACAAAGTCTCCTGGAGATATTATTGGaggGTACAGGAAACTGTGAGACATCATACTTATGGAAATATTAAGATATTCAAGGACAGTGACTATTATTACCTGGACGGATCCGACACGAGCGTGGCGAACTGGATGCGATACGTCGCGTCTGCCTACTCGCTCTCCGTGATGAACCTCGTGGCTTGTCAACATCAGGAACACATATATTTCTACACGATCAGAGACATTATGCCAAATGAAGAGTTGATGGTATGGTATTGCAAAGATTTTGCGACGAGGTTGGGCTATGATATCGATCCGGAAAGAGCTACATATTCTATCTgcaAAGAAGAAACAATCAAAAAAGCTTATGGCTTACCACCTGCACCAGTGCACCCAGAAATTGCCTTCAATCACATGAAATATGTTCTTGGATTAACAAACACCAAGGAACTGCTAGAAGCTGAGATCCCAAGCCGACGGCGAAAACGAGAAGCAACTGATAAGCCTTTCCATGAAAACGGAACAACCATACTTCGAGAGGACCCGAGATGTATGAACAAAAATGACAGGGTGGTTCTGAGGGCCGATATTTCTACCGACATCATTCATAACAAAACGGAAAACTCACTTGTATGTGAACAAAGATCATTATCGCCGACCACCTTAATGCCTTCACCCTCACCGGTAAAAATGCATAGAGAAAACCCTACTTTAATAATCCATCAACACAAAGAGAGCACATCTCAAGTGGTTATACATCAACTCGAGAATCCAAGAATTCATAGCAATAGGTCACCTGCCCAGTGCCATACCTTGAGAGACATGCGTGGACCATCTCCAATGGCACAAAGTAATCAAGAAAAGCTAGGAAATAAATCTCCAATCCTCACTCATTGTGTAGGACCACACTACGAACATCAACTGACACCTAATGATGGATCGGTGCGATCAGATGAAGGATACCATAGTAACGGCTATCACGATGAATTCACACCTCCTGAAGATTCAAGTGATTCCGACGTAGAAAATTATGTTCTTGACTGTTCCAATAAAACCAATGAACCCAAAGAGACAGTGATAGTCCAAAAAATTGACCAAGACATGCATCGCAATGAATACAggaaagtgaaaataaaaatgccaAGAGCATACCAGTATCAAAATCACAAAGATATGGACTGTGAAAGTGAAAAGGAATTAGTAATCGCTGAAGAAGTTCCCAACACTCCACAAAATTTATCACCACCAAGACGTGACCCAGCTACATCGACTGTCATAGTGTTGGAATCATCTCAAAATACGGTGGTGCCTCTAAACAAACCATACTATGAAGACGATGTTATTTCGCCAACGCCACAACCGGCTTTTATGAGATATTCTCCACCAGATACTAGAATACTGGAAACAATTTTAACTGGTAACAGAATcgatacaaataataatgatcCGAACCGCCGTCAACCAAATGCGACACCGCCGCCTTCATCTCCAACTGAAATGGCTTATTCATATAAGAAGAGTCAGAGGTACGGCAATGTTTGCAGTCCGGACTCCAGCTCTAACCTGACCCCTCTGCCGTCGCTACTACCATTACCGCAGCAGCTACCTACACCCAGCGCTGCCTCAATTTATTCATCATCACCACCACACACGATTCCACATACAACTGAAATCCGGGAGATCAGAGAAATAAGAGAAATCCGCGAGACACGATATGAAAGTCACTACCCCAACTACTCATATAACTTATACTCTCCTCCAAACTCTACAATAATCACTCAACTAGGATCTCCACCCAGTAGTTACTCACCCACGGTGACTTCATCTCACCAGTACGAGAGATCACAGAATGTTCAAAGTAATCACCACTATCCATCGTCGACAAGTGTAATTACGCTCAAAAATTGTTCACAGTTAAGTTTAATACAAAACACGAATGTGAACAGTCAAATGGTTCCTCAACATGGCAGCGTCAGCCCCGACGGCTCGTGTGGACTCATGGGGGCACCGATGAGTCCTGGCTCGCAATCCTCGCGGGGTTACAGGAGCTTGCCTTACCCACTAAAGAAAAAGGACGGGAAAATGCACTACGAGTGCAATGTTTGCTGTAAGACGTTCGGACAACTTTCGAATCTGAAGGTTCACTTGAGAACGCATTCTGGTGAGCGGCCTTTCAAATGCAATGTATGCAGTAAATCATTTACGCAACTTGCACATCTACAGAAACATCACCTAGTACATACGGGGGAGAAACCGCACCAATGTGATATTTGTAAAAAACGGTTCTCCTCAACGTCGAATTTAAAAACACATTTACGTCTGCATTCAGGACAAAAACCATACGCTTGTGATTTGTGTATGCAGAAATTCACACAATTTGTACATTTGAAACTTCACAAGCGGCTACATACGAATGACAGACCATACGTTTGCCAAGGATGCGACAAGAAGTACATCAGTGCTTCCGGACTACGCACTCACTGGAAAACTACTAGCTGTAAGCCAAACAACATTGAAGAAGTATTAGCAATAACGAATGCAGCAAACACTGAATGCATTGGTACCGTCGACAAAGACTGCCACGAAAGAGAGGGGCACGAGGCATACGAGGTGCACTCTCCATCACAGGGAGGGCTGGTGGGAGCCGGTGAGGCGCGCGTGGCGCTGTCGCACGGCGATCTGCTGGCGCAGGCGCACTCCACCACGCCGCACCTGGCCACGCACGGCGCGCACTCGCCGCATGCCTACCGCGCGCTGCCCGAGCACGAGCACTATGCCGTGCCCGCAGAGCCGCGCGCCTCTGTCATCGAGTCCAGCCAGCCGCTCATCATCGAGTGCACCTGA
Protein Sequence: MLLIDNDLWDCVQDTFSATSNELVKRDARARAKICLMLSEGIYPLVTEAKTARETWLALKNAYADAGLMRRLSLLRKMFRIKLESYPSMEAYVTEVRGIQQQLRSIGAGLDDEFVGIIMLAGLTDKYNPLVMAIEHSRSTITSELVISALLKEGQRQESNEAPKDDSALASSAGGSGGRDHTREIVCHFCKRKGHFKWQCKQFKAKQPDKKKSNAHSAMVTSVNANSDFLTLLSSVGSSDNWVLDSGATSHMTPVKSLLNPTKSCSKMITCANSEKIVSTSQGSVELNLRNGERDTVVKMNDVLHIPELITNLMSVGRFADAGNIIVFDKTKCSVFNNNVKIDGKALFTAPRQNGLYVLGSGCNQATAFLGEDNQNKFELWHRRLGHLSPAQMQILKRIVKGLDYGKKGDGAPCIPCSQGKQCVKKFPKRKKSFRASGMLDLIHSDLAGPIDVETWGGNRYVLLFIDDFSRKVFGYVIKQKTEVLEKFKEFKRLVENQTEKKIKRFRSDNGTEYTNKEFQAYLAKCGIAHQTSVTHTPQQNGVAERTIRTITEKARCMLHDSNLSKRYWGEAVGTAIYLKNRSPTLAIAGKVPEEVWTNHEVDLTNLKVFGSTAQVLVKDNSRRKFDSKTRELVFVGYSEVQKGYRFVDPVNPRRIIIARDAVFDERSKVIKEIKPPERSAQVSRKKSRREYVEVPIFGEADTAQGTSRAAAPEDGPSQSNMVMTPSSSPTIVEEEFHDSFEEPSTEPVQAVEEPEERRYPLRNRVRRIDEDMVYNFHVANDPDPISVMDAMKRSDKDLWKKAMKEEYDSLMENQTWELADRPRDANVVKNKWIFKLKIGADGKVQRHKARLVAKGYSQKFGEDYTETFAPVVKLSSIRLLLGLSAELDLNVHQIDVTTAFLNGDLDEDLYMEQPESFIKKGNEKKVCKLKRAIYGLKQAARCWNVKVHDHIIKSGFTRSKYDPCVYIKKGNDNTLIAIALYVDDFYIFGSSVVDIERVKRTIAKAFKTKDLGEAKDCLGIHITRSNGQISLSQASFAKRILEKYGMQDCKPVATPMELNLRLAKGERREDFSFQEIIGSLMYLSCGTRPDLTFAVSYLSQFNTCWDEQHMTVLKRVLRYLKGTVDYKLVYKRTGKPLVAYSDADWGANADGHSFTGYALIFGGGAVSWQARKQRCVALSTAEAEYIAICETSKEVVCVKGLLEELAGVNAGVTVFSDSQSASKLVYSSVIGRRSKHINIRYHFIRELAETGSTSEEVPSTTVVGHTGSPGGADVVIGVSSAGAYDVTRMREEEFERLTVYIVPDVPSERGTPNRAERTLPRSLALRPSAVLSTPNTPTEGVWSIGVIPRGTRFGPFEGTRTPNKPNDKVSWRYYWRVQETVRHHTYGNIKIFKDSDYYYLDGSDTSVANWMRYVASAYSLSVMNLVACQHQEHIYFYTIRDIMPNEELMVWYCKDFATRLGYDIDPERATYSICKEETIKKAYGLPPAPVHPEIAFNHMKYVLGLTNTKELLEAEIPSRRRKREATDKPFHENGTTILREDPRCMNKNDRVVLRADISTDIIHNKTENSLVCEQRSLSPTTLMPSPSPVKMHRENPTLIIHQHKESTSQVVIHQLENPRIHSNRSPAQCHTLRDMRGPSPMAQSNQEKLGNKSPILTHCVGPHYEHQLTPNDGSVRSDEGYHSNGYHDEFTPPEDSSDSDVENYVLDCSNKTNEPKETVIVQKIDQDMHRNEYRKVKIKMPRAYQYQNHKDMDCESEKELVIAEEVPNTPQNLSPPRRDPATSTVIVLESSQNTVVPLNKPYYEDDVISPTPQPAFMRYSPPDTRILETILTGNRIDTNNNDPNRRQPNATPPPSSPTEMAYSYKKSQRYGNVCSPDSSSNLTPLPSLLPLPQQLPTPSAASIYSSSPPHTIPHTTEIREIREIREIRETRYESHYPNYSYNLYSPPNSTIITQLGSPPSSYSPTVTSSHQYERSQNVQSNHHYPSSTSVITLKNCSQLSLIQNTNVNSQMVPQHGSVSPDGSCGLMGAPMSPGSQSSRGYRSLPYPLKKKDGKMHYECNVCCKTFGQLSNLKVHLRTHSGERPFKCNVCSKSFTQLAHLQKHHLVHTGEKPHQCDICKKRFSSTSNLKTHLRLHSGQKPYACDLCMQKFTQFVHLKLHKRLHTNDRPYVCQGCDKKYISASGLRTHWKTTSCKPNNIEEVLAITNAANTECIGTVDKDCHEREGHEAYEVHSPSQGGLVGAGEARVALSHGDLLAQAHSTTPHLATHGAHSPHAYRALPEHEHYAVPAEPRASVIESSQPLIIECT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -