Bvim015468.1
Basic Information
- Insect
- Brachylomia viminalis
- Gene Symbol
- Smarcc2
- Assembly
- GCA_937001565.2
- Location
- CAKZJP020000147.1:918156-956684[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-15 1.8e-11 45.6 0.1 3 44 976 1017 974 1019 0.95
Sequence Information
- Coding Sequence
- ATGAAAGCGTTCATGGACATGAAGCCGGGCGGGTCGTTATGCACGGTGCTTTCCACCATGTTCCGTTTCAAGTCGGAGCAGCGGTGGCGCAAATTCGACTTCCAGGTCGGTAAGAACCCCTCCCGCAAGGACCTGAACGTGCAGATGATGATGGAGATCGAGTCCGCACTGCTGGGCGCTGACGTCATCCGGTCGCCGTGCATATTCATTCGACCGGAGGTTGATAAGACGACCGCTAACAAAGTGAAGGATATCATTGTCAATCATCAGGGAGAGATTTGCGAAGACGAAGAGGAAGCGACGCACATCGTGTACCCGACGGTGGACCCCTTGGAGGAGGAGTACGCGCGGCCGGTGTTCCGCCGCTCCAACCACGTGCTGGTGCACTGGTACTATCTGCCCGACAGCCACGACACCTGGGCGCAAACTGAGCTGCCGGTGGACGTGTCCGAAACAGTGAGCTGGGAGTGCAGCCGTGCGGAGCCGTGGCGCGTGTCGGCGTCGTGGGCGCTCGACCTGCCGCAGTACAACGAGTGGATGAACGAGGAGGACTACGAGCTCGACGCCAACGGCAAGAAGAAGGTCCACAAACTGCGTCTATCGGTAGACGATCTGATCCCGGGCGGAGAGCCGTCGAGCAAGGCCAAGAAGGGCAGTAAGAGGAAGCGCTCGCCGTCGCCACCGCCACAGAAACATGGCAAGAGAAAGAGTCGTTTAACGAAGAGGCGTGAAAATGACGTGGACGAAGAAGAGGACAACGCGTCAAGAGACAACACAGACGCCGTGCCCACGCCTGAGAGCGAACGAGCTGCTGAGCCGGCTGCGAGCGCCTCCGCTGCGGCGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGCGGGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGTACGCTACCACTTATATACAACACTGTAATGTGCAGCGGCTGCGAGCGCCTCCGCTGCGGCGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGTACGCTACCACTTATATACAACACTGTAATGTGCAGCGGCTGCGAGCGCCTCCGCTGCGGCGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGTACGCTACCACTTATATACAACACTGTAATGTGCAGCGGGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGCGGGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGTACGCTACCACTTATATACAACACTGTAATGTGCAGCGGGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGCGGGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGTACGCTACCACTTATATACAACACTGTAATGTGCAGCGGCTGCGAGCGCCTCCGCTGCGGCGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGTACGCTACCACTTATATACAACACTGTAATGTGCAGCGGCTGCGAGCGCCTCCGCTGCGGCGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGTACGCTACCACTTATATACAACACTGTAATGTGCAGCGGGAGCTCGCCGGCCGCGCCCGGCGACGCGCCCGccacgcccgcgccgccgctgGACGCGCACGACGACTCGCAGGGCAAGCACAGCGACTCCAACACGCAGGAAATGCTAACTAAAGAAGAGTTGGAAGACAACGTGACGGACCAGACGCACCACATCGTGGTTCCGTCGTACTCTGCGTGGTTCGACTACAACTCCATACACACCATTGAAAAGCGCGCGCTAACTGAGTTTTTCAATGGAAAGAACAAGTCCAAGACTCCTGAGATTTATCTCGCTTACAGAAACTTCATGATCGACACGTACCGTCTGAATCCCACGGAGTACCTCACTAGCACAGCGTGTCGCCGCAACTTGGCGGGAGACGTGTGCGCAATCATGCGCGTGCACGGCTTCCTCGAGCAGTGGGGCCTCATCAACTATCAGCTGGAGGCGGAGTCGCGGCCCACAGCGATGGGCCCGCCGCCCACGTCGCACTTCCACGTGCTGTCCGACACGCCGTCCGGCCTGCAGCCGCTCGTCACGCGGCCCACTCAGCCGCGACCGGCCGAGAACGTGCCAAAGGTGGAGCCAGGCCTGCCCAACGGCGCCGAGGCGGGTGCTGGAGCCgcaccgcccgcgccgcccatCAAGCCCGAACCTTCGCTGGACCTGGCTGCTGCGTCTGGACTCAAGCTGGACCAGTACCGCGGCGGCATGCGCGGGCGCAGCTGGACGGAGCAAGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTCGCCGCGCACGTGGGCACGCGCACGCAGGACGAGTGCATCCTGCACTTCCTGCGCCTGCCCATCGAGGAGCCCTATCTGCACGACGCGCAAGCTGGTGGCGTGCTAGGCCCGCTAGCCTACCAACCGATACCTTTCAGCAAGACTGGCAACCCTGTGATGTCCACGGTTGCTTTCCTAGCGTCCGTGGTGGACCCGCGCATCGCGTCCAAGGCAACGCGGGCAGCTATGGAAGAGTTCGCTGCTATCAAGGACGAGGTGCCCGCGGCCATGATGGAGGCGCACGTGAAGGCGGCAGGCGCGCacgggccggccgccgcgctCGCCGCCACCGGCATCGCCGGCACCGCGCCCGACCTGTCGCCCAGCGCTGAACCCAAGAAGGAGGGTACATCGGATATCAAGGCGGAGCCTATGGAGGTGGAAGAAAGCGAGGCCAAGGTGAAGGACGAGCCGCAAGAGGCGCCCGCCGTCGCCGAGACGGATAAGGAACCCAAGGAGGAACCTGCAGCTCAACCTGaaaaaactGAAGCAACAACGACGGTAGACGCGAAGCTGCAATCCGCAGCAGCTGCAGcgttggccgcggcagctgtcAAAGCGAAGCATCTCGCCGGAGTCGAGGAAAGAAAAATCAAGTCGCTGGTCGCGCTGCTAGTGGAGACACAGATGAAGAAGTTGGAGATCAAGCTGCGGCACTTCGAGGAGTTGGAGGCCACCATGGAGAGGGAACGGGAAGGACTGGAGTACCAGCGTCAGCAGTTGATTCAGGAGCGACAACAGTTCCATCTGGAACAGCTGAAAGCCGCAGAGTTCCGCGCAAGGCATCAAGCGCATCAAAGGCTGCAGGCGGAGAGCGGTGGCGCGGCGAGCGCGGGCGcagcgggcgcgggcgcggcgagCGCGGCGGGCGCGACCGGCGTGGCGCCGGCGGTGGGCGCTGTGCCGGCCGACGCGCCGCCCGAGcccacgccgccgccgcacgCCTAG
- Protein Sequence
- MKAFMDMKPGGSLCTVLSTMFRFKSEQRWRKFDFQVGKNPSRKDLNVQMMMEIESALLGADVIRSPCIFIRPEVDKTTANKVKDIIVNHQGEICEDEEEATHIVYPTVDPLEEEYARPVFRRSNHVLVHWYYLPDSHDTWAQTELPVDVSETVSWECSRAEPWRVSASWALDLPQYNEWMNEEDYELDANGKKKVHKLRLSVDDLIPGGEPSSKAKKGSKRKRSPSPPPQKHGKRKSRLTKRRENDVDEEEDNASRDNTDAVPTPESERAAEPAASASAAASSPAAPGDAPATPAPPLDAHDDSQGKHSDSNTQRELAGRARRRARHARAAAGRARRLAGQAQRLQHAGTLPLIYNTVMCSGCERLRCGELAGRARRRARHARAAAGRARRLAGQAQRLQHAGTLPLIYNTVMCSGCERLRCGELAGRARRRARHARAAAGRARRLAGQAQRLQHAGTLPLIYNTVMCSGSSPAAPGDAPATPAPPLDAHDDSQGKHSDSNTQRELAGRARRRARHARAAAGRARRLAGQAQRLQHAGTLPLIYNTVMCSGSSPAAPGDAPATPAPPLDAHDDSQGKHSDSNTQRELAGRARRRARHARAAAGRARRLAGQAQRLQHAGTLPLIYNTVMCSGCERLRCGELAGRARRRARHARAAAGRARRLAGQAQRLQHAGTLPLIYNTVMCSGCERLRCGELAGRARRRARHARAAAGRARRLAGQAQRLQHAGTLPLIYNTVMCSGSSPAAPGDAPATPAPPLDAHDDSQGKHSDSNTQEMLTKEELEDNVTDQTHHIVVPSYSAWFDYNSIHTIEKRALTEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHGFLEQWGLINYQLEAESRPTAMGPPPTSHFHVLSDTPSGLQPLVTRPTQPRPAENVPKVEPGLPNGAEAGAGAAPPAPPIKPEPSLDLAAASGLKLDQYRGGMRGRSWTEQETLLLLEALELHRDDWNRVAAHVGTRTQDECILHFLRLPIEEPYLHDAQAGGVLGPLAYQPIPFSKTGNPVMSTVAFLASVVDPRIASKATRAAMEEFAAIKDEVPAAMMEAHVKAAGAHGPAAALAATGIAGTAPDLSPSAEPKKEGTSDIKAEPMEVEESEAKVKDEPQEAPAVAETDKEPKEEPAAQPEKTEATTTVDAKLQSAAAAALAAAAVKAKHLAGVEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARHQAHQRLQAESGGAASAGAAGAGAASAAGATGVAPAVGAVPADAPPEPTPPPHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -