Bvim013619.1
Basic Information
- Insect
- Brachylomia viminalis
- Gene Symbol
- SNAPC4
- Assembly
- GCA_937001565.2
- Location
- CAKZJP020000124.1:980428-982839[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.3 1.9e+04 -2.5 0.0 4 27 166 195 165 204 0.71 2 5 3.3e-10 8.4e-07 30.6 0.1 1 45 268 314 268 315 0.94 3 5 1.9e-07 0.00048 21.8 0.1 2 44 322 368 321 370 0.95 4 5 9.7e-10 2.5e-06 29.1 0.0 1 43 374 416 374 418 0.97 5 5 1.9e-06 0.0048 18.6 0.0 3 45 426 470 424 471 0.91
Sequence Information
- Coding Sequence
- ATGGAAATTGACGACATCGAGTTGGACTCTGAGACCGACTCGGAAGTCTACAGTGAAGACGATTCGATATTCGAAGCTGAAAACACGAGCCAGCGTCTTGAGCTGATAGACAACGATGACGCATTACTCAGTGTGGGGAAGTCGCGTACCCACACGAAAATCCAACAAACACACAGTGACAATAAAAGAAGTAGTGAATCATCAGCAGCACTAGCTCAAATAGATCTAGCTTTGTCGGCAAACAAATTATTAGACGAAAAGATGAAGAGATTGGAGAGAGATCTTGCCTCACGGCTGAATGAGTGCCGGGAGAAGCTGAAAGTGGTTCAACGTAGTGCTGGTATACAGAATGATAAAAATGAAACTTTCCGCTACATCAATTGTGGTAGACCCTACTTTAAGGACAGACAGAACTTTCCGGCTCCAGATAATGATGATGCTAAATTGGCAAAATCGCAGATGTATGACTTCTCCTTAGTAATTTCAGCACCTGGCTGGACAGTGAGAGACAAGTCTCAATTTGTAAACATGATGCACAAACTGTCaatagatattaaaaaaaatgaactgTTTAGTAAAATTGCTACCTTACAACGCcaaaataaatctaaaaaagTGGAAAAAGAAATAATGGCCATTAGAAAGGAAATTGATACTGTAAGTAAATTGCCTCTGTATCAAGTGGCTCTTCCGATAGACAAGGAGTATGATTGGGACATGTtagcaaacaaattaaataggaGGCACACAGCACAAGAGTATCAATCCTTCTGGAAGTTATTCTTTCATCCTTCAATTAGCAAAAATAGTTGGAGCAAAACTGAGCATGCAGCGTTACAGAGAGTTGCTTGCCAAAATGGCAAACAGGATTGGGATAAAATTGCTCTCCAACTAAATACTGGCCGGACTGGGTATCAGTGTTTTGTATACTATCGGACAAATATGACCAGCTCTTTTACTGGAAAGAAATGGTCTCACGAGGAGATAACATACCTTAAAAGATTGATAGAATATTTCAAAGAAGACTTTTACATTCCATGGGGGAAGATAGCTGCAGCAATGGAAAACCGAACTAAAATCCAAATCTATAATAAGTATATGAGACTCATTGAACAAAGGAAAGGCAGGTTCCTCCCTGAGGAAGATGCGGTTATTCTTAACTGCATGCAAAGATTTGGAGCCAATTTTAGGAGGATGACTTCTTATTTACCAGGCCGATCTATGGTCCAGATACGTGCCAGATATCAAGTCTTGAACAGAATGAGAGTGTCAACTGTATGGACTGTTGAAGATGACAAGAAACTTATTCAATTGATGGCCAACCAAGAGCCTAACATGAACTTTTCAACAGCTGCCCAATTTTTTCCAAACTTATCTAGAACAAAAGTTAGATCTAGATATATTACCCTAATTAAATGGATGAAAAAACATCCTAATTTAGATGTGGAACATGCACCGCGACGAGGCGCGCGACGTTTGAATCATGGGGAAGCTAGTGGAAACCTGATAGAGGCAGTagagaatttaaaaaattctttAATTACAACAGTCCGAAAGAGGGCTAAGAACAAGAGGATTACTGAGGAATCTACTCACAAAGATTTAAATGATGCTATTGTTGTGTATCTTGTGAATtgtatattaaaagaaaaagaaactgaATCAAAGAAAACTCCagaaaatcatttaattttaggTCCTGACCATGTTGTCTCATTTGCAGACTTGAACATTACAAACCTGcgcaaaaatataatatttttaaatgcacgTCTAGACGAGTCTGCTTATATAGACAGCACCTACGAAGAAGATTATCCGTCTTTAGGAGATAGTAATCAAGATGTTTCTTTAGTTAAAGTGAAATCCTATTCTCGGAAGCCCTCCAAACAAACTACAATGGTTAGAGACGCTCCTAATGTTTGGGGAACTCCTACGCTTTTTCAAGGGATACGAATGCTAAATCTGCGAAATTATGTGTTCCCTCCACAACTGGCAACCATTACTGGTGCTAGAGCCATAATGGCATATGTGATGTCAACCGGTCCATACACTGAATCTATAAACCTACATGTGCTTTGCAGGCGTAACATATTATTAAAGGAGCTTTTAGATCAGGTTCTTGAACGCTTCTATGTTTTATTCACATGGCCAATGATCTTATCTAATGAACTGCCTAATGAGATAACTGTATCAAAACTAACAAGAACAGATTCTGTTTTTATCCGACCACCTATATTGCCAACTGCACCTGAAGTTACAATTAATGTTAAATGtataaagaaatttaaaaatgtagatgTCACAGAAATTATTGATCTGGATGAAGATGCAGATAAGGATGTTGTGATTGCTGTTAAGGAGAAAATTGATACTGATACTGATGAGAAGATAGAAAAACTTCTTTGTTGA
- Protein Sequence
- MEIDDIELDSETDSEVYSEDDSIFEAENTSQRLELIDNDDALLSVGKSRTHTKIQQTHSDNKRSSESSAALAQIDLALSANKLLDEKMKRLERDLASRLNECREKLKVVQRSAGIQNDKNETFRYINCGRPYFKDRQNFPAPDNDDAKLAKSQMYDFSLVISAPGWTVRDKSQFVNMMHKLSIDIKKNELFSKIATLQRQNKSKKVEKEIMAIRKEIDTVSKLPLYQVALPIDKEYDWDMLANKLNRRHTAQEYQSFWKLFFHPSISKNSWSKTEHAALQRVACQNGKQDWDKIALQLNTGRTGYQCFVYYRTNMTSSFTGKKWSHEEITYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIEQRKGRFLPEEDAVILNCMQRFGANFRRMTSYLPGRSMVQIRARYQVLNRMRVSTVWTVEDDKKLIQLMANQEPNMNFSTAAQFFPNLSRTKVRSRYITLIKWMKKHPNLDVEHAPRRGARRLNHGEASGNLIEAVENLKNSLITTVRKRAKNKRITEESTHKDLNDAIVVYLVNCILKEKETESKKTPENHLILGPDHVVSFADLNITNLRKNIIFLNARLDESAYIDSTYEEDYPSLGDSNQDVSLVKVKSYSRKPSKQTTMVRDAPNVWGTPTLFQGIRMLNLRNYVFPPQLATITGARAIMAYVMSTGPYTESINLHVLCRRNILLKELLDQVLERFYVLFTWPMILSNELPNEITVSKLTRTDSVFIRPPILPTAPEVTINVKCIKKFKNVDVTEIIDLDEDADKDVVIAVKEKIDTDTDEKIEKLLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01246845;
- 90% Identity
- iTF_00037763;
- 80% Identity
- -