Bvim037016.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachylomia viminalis
Gene Symbol
arid5b
Assembly
GCA_937001565.2
Location
CAKZJP020000465.1:75-23148[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-13 5.6e-10 41.1 0.0 3 89 271 344 269 344 0.90

Sequence Information

Coding Sequence
ATGCTGGGCGGCCTAGTTGATTCTTTTGTACGCATGATGAACCGCCGGATGAACTTGGACAAAACCCAGGTTATGTTCAACGAACACGTTACTCCGGGACCGATTGCTGTGAATGGCGGTGCTCTCGAGGATGAAGTACTAGCCATCAACGACAAGGTAGTCCTCCGCGCAGACGACCTGCTCTCCTGGATGTGCGTGGGCACCGAGTGGCGCTGGGGGCTCCGGGCTGTGTGGCGCGGCGCCTGCGCCCCCCCAGCCGACTTGCCACGTCATGCGCCGCTCACACATACGAAGTTGGATTTCAGTGATGTTGATACCGAGAAGAGTACTATTGTGGTGGACGAAGATGCTCCAGGCGTGGTAGTCTTCTCCTACCCGAGGTACTGCCGCTACCGGGCGCTGATAGCCAGACTCGAAGGCATCCAGGCCTCATGGCTGCGAGACTCCTTGGTGGCAGCTCTAGGAGGGTATGCTGCGCCGACTAGCAACACCAGAATACTGTACTGCAAGGACACATTCGAGTACCCCGAGCTGGAGGGCCACGAGTTCGTGTGCAACCACCTGGCGCCGCGCCTCAAGGGCCGGccgcgcgggcggcggcggcgcgcgcacTCGCCCGAGCGcgcgcacgccgccgccgccggcgagCGCGGCTCCGACCGCTCGGACTCCGACGAGCCGCCTGCCTGTGGAGCCGCCCATAGCGGTGACCCGCCGACCCGCCGCCGCCTGTCCCTCCGCAACGGGCCCCCCCCTCCCAGCGACGAGGACGAGGAGGAGTACAAGAGGATAGAACAGACCCCCGAGGACAGAGCCTTTCTCCAGACACTGAAGATGTTCTACAAGAGCAGGAGCGAGCCCTTCAAGAGTGGACATACTCTGAAGCACTTATCTCTCCGCGTGCTGTACCTGTCGGTCGTGTCGCGCGGCGGGTACGAGGCGGTGTGCAGACACAAGCTGTGGCGCGCGCTCGCTCGCGACCAGCCCGCCAGGACCCGGCGCCACTACGAGAGattcCTTCTCCCCTTCGAGAACCACGAGCGACGCAACGGCTCGTCCCTCAAACGGAACGGCAAGCTGGCCGCCTCCCCGCGCACCGTGGCCACCATCGACGTCACGCACTCCCCGCGCCGGGACTCCTGCGTCCTGCGCACGCCCTCGCCGCCCGGCGACCAGCTCGACAGGCTCGACCGGCTCGACAGGCTCGACAGGCTCGACAGGCTCGGCGTCGACAGCGAAACGGGAGAGATAACCACCAAAGATGAAGTTGTAGTCAAAAACGCCGAAGAGCTAAATAGAGAATTTTTAGACTCTCTAGCAAAAGAGGAAAAAACGGTTAAGATCTCGGTTAAACCGGTTGAGAGTCTGATCGAACCGGTTAAGGTTTTTGAGAGCTTGGATGTGTCCAAGTTGGAGGGGCAGAAGGATGCGGGCAGGGATTTTAGTCAAAACTATTTGAGTGATATGCAGAAATTTAGTATGggAGCAGAGTCCCTATCGGCTCGTGCCACGCCTCTCAACGGTCACGCCACGCCTGCGCCCACCGACCTTAAGACGTCCCGCCCAGTAGGTCGCAGTTCTCTACGTGCCGTGCGCGTGAAGCCCACGCGGCCGCATGCGCACGCGCAGCTACTGACGCCGGCGAGCACGCCCCCGCACCCGCTGCGCCCGGAGTCGGTCCCGGTGTCTCCTCCGGTCACTAACTTCGGCATCCACCACCCGCCGGCGCACGCGCATCACGACGACGACATCGTGGAGGTCCCCTACAAACCGAAAACCCCAGAAATCATCGACTTAGACGAGTACCCAGAGAGCCCCCAAGCAGTCAAAAAGAAGAAACTGGACATCCTCAAAGAGCGAGGCCTCGAAGTGACCGCTCTGCCGGCCCCCTGGCAGGGCGTGGGCCCGCACGTCATGGGCCCGCCCATGCTCCTCAACCCAGCAGTGCAGCATCAGATCATGACGCAAGCACAACTATTCCAAATGTACAATATCATGCCACAGAACTATGCCAACGGAATTCAGCCTCCGAAAGTCATCCAAGCGTCTTCTATCTTCGGTAATGCAGGGCCTGAAAAGACGGTCTATGGCAATCCTAAGGATCCTTTCATGCCACCTCCTCATGTTCTTCATGGAGTGCCAGTTAAACCTTTGAAGACTGCTCTCCCTCCTACCATTCCTCAGGATATCTTAGACCTCACCTGCAAGTCTTCAAGCCCCCCTCCGCAGAAGCCTGCAGTCGAAATAGTAAGGGTACCCTCCTCCCCCTCTCCAACGGCACAGAATTTAACAAAGAATTATTCTTTAGTCGACGGAAAAGCAGTCGTCGGGTCGAATTTAGAAATTACTTTAGTCAATAAAGCTTCGAGTCCTGGCAAGAATCGGGCTCCACAGAAGAGGTCTAGTAACGGAAAGTTCATGTCGGCAAAAACTCCTACCCCGCCTAAGGAACCCTACCCGAAGTACACTTCGCCTACCACGACCCAGAAGAAACCACCTATTAACATCCCCAACTATCAAATCAGAGAAGATTCCTCTCCTACCCAAAGCCAGGTTCTGCAAAACGCAATGAAAAATCAGAATCTAGCTCAAATAATGGATTTGCAAAAGAACTCAGTTCCTATGACGTCTTTCATGGACCCTTACGTGGCTCTATACAGCAGTTTGGCCGGTCAAATGGACCAGAGGCAACTGGCTATGTACCGAGACTTAATGACCAATCAATTTAGATACCCAGGACTTCTAAACCTTGGTGTAGGGACTCCGACAACGAAAAATTAG
Protein Sequence
MLGGLVDSFVRMMNRRMNLDKTQVMFNEHVTPGPIAVNGGALEDEVLAINDKVVLRADDLLSWMCVGTEWRWGLRAVWRGACAPPADLPRHAPLTHTKLDFSDVDTEKSTIVVDEDAPGVVVFSYPRYCRYRALIARLEGIQASWLRDSLVAALGGYAAPTSNTRILYCKDTFEYPELEGHEFVCNHLAPRLKGRPRGRRRRAHSPERAHAAAAGERGSDRSDSDEPPACGAAHSGDPPTRRRLSLRNGPPPPSDEDEEEYKRIEQTPEDRAFLQTLKMFYKSRSEPFKSGHTLKHLSLRVLYLSVVSRGGYEAVCRHKLWRALARDQPARTRRHYERFLLPFENHERRNGSSLKRNGKLAASPRTVATIDVTHSPRRDSCVLRTPSPPGDQLDRLDRLDRLDRLDRLGVDSETGEITTKDEVVVKNAEELNREFLDSLAKEEKTVKISVKPVESLIEPVKVFESLDVSKLEGQKDAGRDFSQNYLSDMQKFSMGAESLSARATPLNGHATPAPTDLKTSRPVGRSSLRAVRVKPTRPHAHAQLLTPASTPPHPLRPESVPVSPPVTNFGIHHPPAHAHHDDDIVEVPYKPKTPEIIDLDEYPESPQAVKKKKLDILKERGLEVTALPAPWQGVGPHVMGPPMLLNPAVQHQIMTQAQLFQMYNIMPQNYANGIQPPKVIQASSIFGNAGPEKTVYGNPKDPFMPPPHVLHGVPVKPLKTALPPTIPQDILDLTCKSSSPPPQKPAVEIVRVPSSPSPTAQNLTKNYSLVDGKAVVGSNLEITLVNKASSPGKNRAPQKRSSNGKFMSAKTPTPPKEPYPKYTSPTTTQKKPPINIPNYQIREDSSPTQSQVLQNAMKNQNLAQIMDLQKNSVPMTSFMDPYVALYSSLAGQMDQRQLAMYRDLMTNQFRYPGLLNLGVGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00374957;
90% Identity
iTF_00905897;
80% Identity
-