Bvim040704.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Brachylomia viminalis
Gene Symbol
harbi1
Assembly
GCA_937001565.2
Location
CAKZJP020000555.1:611578-630036[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3e-20 1.3e-16 62.3 0.1 13 89 1061 1134 1050 1134 0.90

Sequence Information

Coding Sequence
ATGGCGCTAAGATCTCGGCGCCCGAGTAGGCTTTTGTTAAACAGGCTTATAGCGGAACGTTGCACTCCTCTCAGAAAGGTGGGCTTGAAACGCAAGAAGAACTCGTCTGACGAAGATGAACCCCTCATATTCCAGAAAACTCGCCTACATCAGAAAGCAGAACAACTGAGCACTTCAAAACAGACCGCTGCAAGGGAGAGTGCTCCCAAGGAGAACACTCGTAAAACGAGCTCTCCCAATGAGATATCtgctaaaaaaaaaccttgcaaGAATAGAATTAAAACTGTAAAAGAGATCACCACAAACGAGATCACCACTCACGAGACCACTACAAAGGAGATCACCACAAGCAAGACCGCTACAAAGAAGATTACCACAAACGAGATCAGTTTAATGGAGACTGATCGCAGTAATGACAAGCAAAGTATAGCTAGGAAAAAAACTCCCATGAAGAGAGCTCCGCAGAAAAGGCTTCATAAGAAATGCTCTCCCAAGCAGCCTGCACATGCCGCACTAGAGTTCACCATACCAGATTCCTTAATCACCGTCATCAAGAAAGACCACATTGTTGGAAGAACGGTCGTCCAGGTCCATAAGGAAGACCAGGTCACCCCAGATGAATCGGTTATCACAGTCATCCCGAATGACCAGCTATCCCCAGATGTCCTGGATGATCTCGTTGCTCCGGTTGTTCCAGTCGCCACGGATGACCCAGTTATCCCGCTCGTCCCGGCTATGCGGGATGAACTCGTTACCCCAATTCCTGATTACGGCGAAGTTCTGTCGGGATTAAATGACGTTGTCAAGGATGAGTGTATCGGTATTAATAACCCggtgaatgatgatgatgatgaattgaaAGTCAGCATTGAACCTCCGGAGAATATAACGGTGCATATTAATTCCACACTCGAAAACCGTGTCCCCAATGGCCCAAATGACAAACCGATGATACCGACGGTCAACGATAATGTTCCGGAAGTCCCATGTCATTTACCGGTGATTTCGCATTATGAATCGATTGCCAACGATGATGTACCGGTGATTTCGCATTATGAATCGATTGCCAACGATAATGTGCCGGTGATTTCGCATTATGAACCGATGGTCAACGATGATGTTTCGGAGGTCACAAATAATACACCGATGCTTTGGTATGATGTATCCAACGATCATATTTCAGAGGACACGGATGATAAACCGGTGAATTTGCATGAGGACCTGATGATCGATGATGCTCCGGAGGATAAGGATGACCTTGATATCACAATGATCGATGATGATCCGGAGGATAAGGATGACCTTGATATCCCAATGATCAAGAGTGTCATGAAGTACGAAGATGATGTAATGGTCCAGAAAGATGTGATGGATCCACCGATTACGAAGCGAACAGATTCTCCAGAGGACACGGATGATAAACCGGTGAATTTGCATGAGGAACTGATGATCGATGATGCTCCGGAGGATAAGGATGACCTTGATATCCCAATGATCGATGATGATCCGAAGGATAAGGATGACCTTGATATCCCAATGATCAAGAGTGTCATGAAGTACGAAGATGATGTAATGGTCCAGAAAGATGTGATGGATCCACCGATTACGGAGCGAACAGATTCTCCAGAATCTTCCGACTATATGAAATTCCTAATATACAATGCTAGATCCGATGAATACGACTCGATCTTCTGTGATAAGGAATTGAACTTCATTATCCGGAAAGAGGCTGAACGTAAAGCAATGTTGAAAAAATCAGCAGCCCATCTTAAGCGTGCTGGAGATGTTCAGGTGGAGCTACCAATGCCATGCGTCGCAGCAGAGTGTGGCACTGACAAGGACGTCGTAAACGCATCTCAGGAATTACTGGACTCACACTGCAAAGTTTGTAAGCCCTGCATCAGGATTAATAAACTCATGAAAGTTTCGGCTTTACTAGAATCTCAAATTGTATTAGCGTACAAGGGTCGTCGAAACAAAGCCGCAGTTCTAGAGAAGGAACGTACGGAAAGAAAAGTTGAAACAGAAGACGTTGAATTAGCAATAGTCAACGAAGACGCAAATTCGACTAAGAAGGACCCAGGTAATATTTACTTGCTATTACCTAACCAATCTACTATAATGATGAAATTAAGAGCCAGCAACGTACACGGCAAAGAGGTCTTGGGAGCTGGGTTGATCCCGAAAAATGAATCTCTGATAAACAAAGAGTTCTCACTTGAAGAACACGAACCTTTACTTGACCAAATTATCGAGACCCTGACAATCGGTCCAGACATCAATTTGGAGGGCCGAGACGTCAATTCGGAGAGTCGAAATGACAACACAGAGGGTCGAAACAACAACTTAGAGGGTCAAAACAACAACTTAGAGGGTCGAAACGACAATACAGAGGGTCGAAGCGACAATACAAAGGGGAAAAACAACATTCCGAAGAGTCGAAGGATAAGCATATCATCCGACAGCACTGCTGATATAAGCGATGCTTCGACTGATGATCAAAAACCGCGAACCCGTCTTCCAGCTGAAAGAAGACGATTAAATCGCGGGGATGTTAAAAAGAAGTTAGCTAGGATGCACGAACGCATGAGAGAGGAAAAGGAAAGAGAGATTGCCCGTGTCAAGGAAGAGAAGAGTCTGGAAATATCACGGATTACGGCGGAGAAGAATATCGCTGTCGCGCAGATATCCCGCTACCAGGAGCGGGTTACCCAGATGGAGAAACAGAAACAAAGAGATATGGATCATTTCCAGGTGAAGGTCAGAAAAGAAGTGGACTATAAAATACAGGCTACTAAGCGTATGTGCCATGAAGTCGACGGCATGGCGGTGAATCTGGACAAAGAAAAGGATGCCAAGAAAATGGATTTTGAAGAACTATCAGATCAAGATGCGCCTGGCACCAGCAGTTCCATGCTGCCAACGGATGGCGGGTTGCTAGTAGACGCTCCTATATACCACCCTAGCGAAGAAGATTTTCTTGATCCACTTTGCTACTATGATAAGATCTGGACAGAAGCAGTTAACTTTGGCATCTGTAAGGTGGTGCCTCCTCCAGGTTGGACGCCACCTTTTCGTGTGCATGATGAAATGAGGTTCGATGTTACGAACCAGTACATTTCGCGACTGTTCAACCGCTGGGGACCAGCCGCGAGAGAACTTTGCGCAATCAAGTTGTCTCTGGCACAGCAAAAAGTTAATTTTACACGACCACCGCTGCTGGATGGTGTCGAGGTAAATTTACCGAAATTATACCATCTCGTGCAGCGGCACGGCGGTCTAGAAACAGTATATAACAAGAAGCGATGGGGCAAGGTCGCAGAAGATATGAAATTTAATAAAGGGCCTAATACTGAGAGGAAACTCGACCAGATTTACGTAAAGTATCTGCTACCATACGACACGCTTTCTCATCAGGAGCGCCAGGATATTATGCGGAAAGTCGAGATTGCATGGAACCGAAAGAATCAAAAGCTTTTGGATCGCGCCTTGAACCCGCTAAACCGCCAGAAGCGATTGCTTGGCTTAATTGACTCTTCTGACGATGAGACGGAAGATGAAGACACGGTGGCCGCTGTGAATGAGGCAGAAGACTGTATCATTAAGGGCGCGGTCATGAACCGAGCTAAATTCAAAAAGaTTAGTAATGCAGACTTTGAAATAATCAGCGTGGATGCTAGCTATGGAGGGGCTACAcatgattcatttatttgggGAAACCATCCACTGAAGCATCACTTGGAGGAGCTTAGTCAAAAAGAGTCCATATGGTTACTTGGTGATTCTAGTTATCCTTTGAGGAAACACATGATGACTCCAATAACTATCACTGCTCCGGGTACACAGGAAGCATACTATACTGGAGGCCATGTTAGGACTCGAAATGTCATAGAGAGAACCATTGGTCTCCTTACAGCTCGTTTCCGATGTTTACTGGTGCACCGAGTTCTCCATTATACACCACAAGTGGCAGCAAACATTTTAAATGCATGTGTGGTGCTACACAACATAAGTGTCCGGTCAAATCTACGAGTACCGGAGCTCACTGAAGAACAGGCTGCGCAAGAAGCGACAATGCAGCAAATGGTACTCACCATGCCAATCAGCAATCATCTAGCAGCAACAGGGAGCTGGATGAACGGTTAG
Protein Sequence
MALRSRRPSRLLLNRLIAERCTPLRKVGLKRKKNSSDEDEPLIFQKTRLHQKAEQLSTSKQTAARESAPKENTRKTSSPNEISAKKKPCKNRIKTVKEITTNEITTHETTTKEITTSKTATKKITTNEISLMETDRSNDKQSIARKKTPMKRAPQKRLHKKCSPKQPAHAALEFTIPDSLITVIKKDHIVGRTVVQVHKEDQVTPDESVITVIPNDQLSPDVLDDLVAPVVPVATDDPVIPLVPAMRDELVTPIPDYGEVLSGLNDVVKDECIGINNPVNDDDDELKVSIEPPENITVHINSTLENRVPNGPNDKPMIPTVNDNVPEVPCHLPVISHYESIANDDVPVISHYESIANDNVPVISHYEPMVNDDVSEVTNNTPMLWYDVSNDHISEDTDDKPVNLHEDLMIDDAPEDKDDLDITMIDDDPEDKDDLDIPMIKSVMKYEDDVMVQKDVMDPPITKRTDSPEDTDDKPVNLHEELMIDDAPEDKDDLDIPMIDDDPKDKDDLDIPMIKSVMKYEDDVMVQKDVMDPPITERTDSPESSDYMKFLIYNARSDEYDSIFCDKELNFIIRKEAERKAMLKKSAAHLKRAGDVQVELPMPCVAAECGTDKDVVNASQELLDSHCKVCKPCIRINKLMKVSALLESQIVLAYKGRRNKAAVLEKERTERKVETEDVELAIVNEDANSTKKDPGNIYLLLPNQSTIMMKLRASNVHGKEVLGAGLIPKNESLINKEFSLEEHEPLLDQIIETLTIGPDINLEGRDVNSESRNDNTEGRNNNLEGQNNNLEGRNDNTEGRSDNTKGKNNIPKSRRISISSDSTADISDASTDDQKPRTRLPAERRRLNRGDVKKKLARMHERMREEKEREIARVKEEKSLEISRITAEKNIAVAQISRYQERVTQMEKQKQRDMDHFQVKVRKEVDYKIQATKRMCHEVDGMAVNLDKEKDAKKMDFEELSDQDAPGTSSSMLPTDGGLLVDAPIYHPSEEDFLDPLCYYDKIWTEAVNFGICKVVPPPGWTPPFRVHDEMRFDVTNQYISRLFNRWGPAARELCAIKLSLAQQKVNFTRPPLLDGVEVNLPKLYHLVQRHGGLETVYNKKRWGKVAEDMKFNKGPNTERKLDQIYVKYLLPYDTLSHQERQDIMRKVEIAWNRKNQKLLDRALNPLNRQKRLLGLIDSSDDETEDEDTVAAVNEAEDCIIKGAVMNRAKFKKISNADFEIISVDASYGGATHDSFIWGNHPLKHHLEELSQKESIWLLGDSSYPLRKHMMTPITITAPGTQEAYYTGGHVRTRNVIERTIGLLTARFRCLLVHRVLHYTPQVAANILNACVVLHNISVRSNLRVPELTEEQAAQEATMQQMVLTMPISNHLAATGSWMNG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-