Bvim042113.1
Basic Information
- Insect
- Brachylomia viminalis
- Gene Symbol
- Kdm5
- Assembly
- GCA_937001565.2
- Location
- CAKZJP020000594.1:3357-5789[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-21 5.2e-18 66.8 0.1 3 88 94 175 92 176 0.92
Sequence Information
- Coding Sequence
- ATGGATAGCAAGAACATTCAGAAAAATGCCATGCATAAAAGTGCAGAATTCACTTTCACACCACCACCTGAAGCACCCGTTTTTGAACCTACGGCCGAAGAATTCTTGGATCCACTTGGATACATAGCTAAAATCCGCCCAGTTGCAGAGAAAACgggtatttgcaaaataaagccTCCGTCGCGCTGGCAGCCACCGTTTTCATTAGACGTGGACAAATTAAAATTTGTGCCGAGGATACAAAAAGTGAACGAGTTGGAAGCCATCACGCGTCTAAAACTTTTGTTTCTTGAGAAAATTTTAAGATTTTGGGAACTTCAAGGATTGCCATTAAAAATTCCAATGcttgaaaacaaaacattggATTTGTACTGTCTCAAATTTTGGGTAGATGAAGAGGGCGGCTTTGAACGCTGTAACACTCCTAAAAAATGGCGTAAGATTGCAAGCGCGATGGGTTACAGTCAGCACATGAGTACTATGAGTTTTCttagaaataattatgaaaaaatttTGCTTCCTTATGTAATATTTGAAAAAAGTAAAGCAGACATATTCAAAACTGTTAAGAAGACTGAAcccaaaattgaaataaaagaagAAGTTGGAAAGGCTCAGATTACAGAAGTACCTATAGAAAGGATAACAAAGATCAAAGTAGAATATAAAGAGGAGAAACCTCACACAAGCATCAAGAAAACAAAGACAGGATCTGATATCAAACCAGATATGGATAGCTTAAAAAACAAAGTTGAGAGTGAAGAGATAAAACACAACAGAGAACTAAGAAGGTTAGCATGCTATGGACCTGGACCAAAAATGCCTGGACTAAATGATGAAGAATTTGATATTACAAAATCAAGGAAGAGGCCCCGTTATGATCTTGATCCATTAGCAGTTCATCAGTGTGGTATTTGCCAAAAAGACCATAGGGATGATATGCTGTTAATTTGCAATAGTTGTTCTGAAACTTATCACACATTTTGTTTAAGACCTCCGCTAAATTTGGCACCGGATGGAGATTGGCGTTGCCCTTGTTGTATTGCTGAGGTGGTTCACAAACCTGCTGAGGCATTTGGATTTGCTCAGGCAGAAAGAGAATACACATTGCAACAATTTGGAGAAATGGCAGATAAATTCAAATCAGACTATTTCGCCATGTCTGGCCATTTAGTTCCAACAACAGTGGCTGAAAAAGAGTTCTGGAGAATTATTTCTTCAGTGGAGGAAGATGTAACTGTAGAGTATGGTGCTGATCTTCACTCAATGGATCATGGATCAGGTTTTCCAACTAAATCTTCACTAAATCTTTATCCTGGTGACCAAGAGTATGTAGATTCAGGATGGAATTTAAATAACTTGCCTGTTCTAGATGGGTCTGTCTTAAGATTTATAAATGCTGATATATCTGGCATGACCGTGCCTTGGATGTATGTTGGTATGTGCTTTTCGGCATTTTGTTGGCATAACGAGGACCATTGGAGttattcaattaattatttacattgggGCGAGTCCAAAACTTGGTATGGAGTGCCAGGCAGTGGTGCAGAATTATTGGAAACAGCTATGAAGGCAGCAGCACCTGATCTATTTAAATCACAACCAGATTTATTACACCAACTTGTAACTATAATGAATCCAAATATTTTGATGGCAGCTGGGGTACCAATTTATAGGACTGATCAGCATGCTGGAGAGTTTGTGGTCACATTTCCCAGAGCATACCATGCTGGTTTTAACCAAGGGTATAACTTTGCCGAAGCTGTTAATTTTGCTCCACCTGACTGGCTAAAAGTTGGACGTGAGTGTATAACCCATTACAAAAATCTCAAGAGGTTCTGTGTCTTCTCTCATGATGAATTGATTTGTAAAATGGCATTGGAAGGCGATCGGTTAGATTTGGACACTGCACTAGAAACACAAAGGGAATTAGTTAAAGCCACAGAGGAAGAAGGATCTTTGAGAGCTTTAATAGCTAAGAAAGGTCTTAAGAGTGTGCGTAGAACTGCATTTGAGTTACTTGGTGATGATGAACGGCTATGTGAAGTGTGTAAAACTACATGTTTCCTATCTTCAGTGTCATGTAGTGATTGTAAACACATGGTTTGTTTGCAGCATACAAGTAACTTATGTCAATGCCCACTGGTGAAAAAGACATTGAACTATCGCTATGATATGGATGAGCTGCACATTATGCTGCAGACTATAGACTTTAGAGTCAATAGTTTCGACAAGTGGATGACTGAAACTAAGAACATATTACTCCCCACTGCTCCTGACATTGGGAGACTTCAAAAGTTAAAAGTTTTGATAGATGAAGCAGAGGAACTGAAAATACCAAAGTGTGCATTGTTAGCACAATTAAAGGAAGAGTATACAAAGGCAACAGAAAATGTTGAACCAATAGTTATAGAATTAGATGATGATTGA
- Protein Sequence
- MDSKNIQKNAMHKSAEFTFTPPPEAPVFEPTAEEFLDPLGYIAKIRPVAEKTGICKIKPPSRWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILRFWELQGLPLKIPMLENKTLDLYCLKFWVDEEGGFERCNTPKKWRKIASAMGYSQHMSTMSFLRNNYEKILLPYVIFEKSKADIFKTVKKTEPKIEIKEEVGKAQITEVPIERITKIKVEYKEEKPHTSIKKTKTGSDIKPDMDSLKNKVESEEIKHNRELRRLACYGPGPKMPGLNDEEFDITKSRKRPRYDLDPLAVHQCGICQKDHRDDMLLICNSCSETYHTFCLRPPLNLAPDGDWRCPCCIAEVVHKPAEAFGFAQAEREYTLQQFGEMADKFKSDYFAMSGHLVPTTVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLDGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGESKTWYGVPGSGAELLETAMKAAAPDLFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLKVGRECITHYKNLKRFCVFSHDELICKMALEGDRLDLDTALETQRELVKATEEEGSLRALIAKKGLKSVRRTAFELLGDDERLCEVCKTTCFLSSVSCSDCKHMVCLQHTSNLCQCPLVKKTLNYRYDMDELHIMLQTIDFRVNSFDKWMTETKNILLPTAPDIGRLQKLKVLIDEAEELKIPKCALLAQLKEEYTKATENVEPIVIELDDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01487498;
- 90% Identity
- iTF_00783207;
- 80% Identity
- -